RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 CCPG1Q9ULG6 757 aa5.99□□□□□ -1.45
XRN1-201ENST00000264951 NSD3Q9BZ95 1437 aa5.99□□□□□ -1.45
XRN1-201ENST00000264951 ATG16L1Q676U5 607 aa5.99□□□□□ -1.45
XRN1-201ENST00000264951 ANKRD44Q8N8A2 993 aa5.99□□□□□ -1.45
XRN1-201ENST00000264951 DHX58Q96C10 678 aa5.99□□□□□ -1.45
XRN1-201ENST00000264951 KCNH3Q9ULD8 1083 aa5.99□□□□□ -1.45
XRN1-201ENST00000264951 RRP15Q9Y3B9 282 aaKnown RBP5.99□□□□□ -1.45
XRN1-201ENST00000264951 ARHGAP5Q13017 1502 aa5.99□□□□□ -1.45
XRN1-201ENST00000264951 C9orf84Q5VXU9 1444 aa5.99□□□□□ -1.45
XRN1-201ENST00000264951 GOLGA8TH3BQL2 631 aa5.99□□□□□ -1.45
XRN1-201ENST00000264951 GOLGA8HP0CJ92 632 aa5.99□□□□□ -1.45
XRN1-201ENST00000264951 PEX19P40855 299 aa5.99□□□□□ -1.45
XRN1-201ENST00000264951 BLVRAP53004 296 aa5.99□□□□□ -1.45
XRN1-201ENST00000264951 FANCCQ00597 558 aa5.99□□□□□ -1.45
XRN1-201ENST00000264951 KLHL30Q0D2K2 578 aa5.99□□□□□ -1.45
XRN1-201ENST00000264951 KARSQ15046 597 aaKnown RBP5.99□□□□□ -1.45
XRN1-201ENST00000264951 RUBCNQ92622 972 aa5.99□□□□□ -1.45
XRN1-201ENST00000264951 KRT9P35527 623 aa5.99□□□□□ -1.45
XRN1-201ENST00000264951 GUCY1B3Q02153 619 aa5.99□□□□□ -1.45
XRN1-201ENST00000264951 RASSF7Q02833 373 aa5.99□□□□□ -1.45
XRN1-201ENST00000264951 KRT39Q6A163 491 aa5.99□□□□□ -1.45
XRN1-201ENST00000264951 RSAD2Q8WXG1 361 aa5.99□□□□□ -1.45
XRN1-201ENST00000264951 PPWD1Q96BP3 646 aaKnown RBP5.99□□□□□ -1.45
XRN1-201ENST00000264951 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.99□□□□□ -1.45
XRN1-201ENST00000264951 HECW1Q76N89 1606 aa5.99□□□□□ -1.45
XRN1-201ENST00000264951 SSH2Q76I76 1423 aa5.99□□□□□ -1.45
XRN1-201ENST00000264951 KDM2BQ8NHM5 1336 aa5.99□□□□□ -1.45
XRN1-201ENST00000264951 NESP48681 1621 aa5.99□□□□□ -1.45
XRN1-201ENST00000264951 GOLGA8JA6NMD2 632 aa5.99□□□□□ -1.45
XRN1-201ENST00000264951 TBC1D8O95759 1140 aa5.99□□□□□ -1.45
XRN1-201ENST00000264951 MAGEA9P43362 315 aa5.99□□□□□ -1.45
XRN1-201ENST00000264951 PDE1AP54750 535 aa5.99□□□□□ -1.45
XRN1-201ENST00000264951 ARID5AQ03989 594 aa5.99□□□□□ -1.45
XRN1-201ENST00000264951 BIRC3Q13489 604 aa5.99□□□□□ -1.45
XRN1-201ENST00000264951 ENOX1Q8TC92 643 aaKnown RBP5.99□□□□□ -1.45
XRN1-201ENST00000264951 GSDMAQ96QA5 445 aa5.99□□□□□ -1.45
XRN1-201ENST00000264951 VPS37BQ9H9H4 285 aa5.99□□□□□ -1.45
XRN1-201ENST00000264951 UBE4BO95155 1302 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 S100BP04271 92 aaPredicted RBP5.98□□□□□ -1.45
XRN1-201ENST00000264951 EMBQ6PCB8 327 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 RHPN1Q8TCX5 695 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 MORC4Q8TE76 937 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 TMX1Q9H3N1 280 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 FAM135AQ9P2D6 1515 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 TMEM247A6NEH6 219 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 STAT1P42224 750 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 DNM1Q05193 864 aaKnown RBP5.98□□□□□ -1.45
XRN1-201ENST00000264951 LAMC2Q13753 1193 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 KRT25Q7Z3Z0 450 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 HNRNPCL2B2RXH8 293 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 CHGBP05060 677 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 MYL1P05976 194 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 GSTA1P08263 222 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 GSTA2P09210 222 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 NLRP12P59046 1061 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 CCDC13Q8IYE1 715 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 ARMC2Q8NEN0 867 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 TRIM56Q9BRZ2 755 aaKnown RBP5.98□□□□□ -1.45
XRN1-201ENST00000264951 CARD10Q9BWT7 1032 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 TRMT112Q9UI30 125 aaKnown RBP5.98□□□□□ -1.45
XRN1-201ENST00000264951 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.98□□□□□ -1.45
XRN1-201ENST00000264951 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.98□□□□□ -1.45
XRN1-201ENST00000264951 FOXP2O15409 715 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 CUL1Q13616 776 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 BBS5Q8N3I7 341 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 CARD6Q9BX69 1037 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 PPANQ9NQ55 473 aaKnown RBP5.98□□□□□ -1.45
XRN1-201ENST00000264951 INTS9Q9NV88 658 aaKnown RBP5.98□□□□□ -1.45
XRN1-201ENST00000264951 C16orf87Q6PH81 154 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 DTX3LQ8TDB6 740 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.98□□□□□ -1.45
XRN1-201ENST00000264951 TRIM45Q9H8W5 580 aaPredicted RBP5.98□□□□□ -1.45
XRN1-201ENST00000264951 ANLNQ9NQW6 1124 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 RBM8AQ9Y5S9 174 aaKnown RBP5.98□□□□□ -1.45
XRN1-201ENST00000264951 GJC1P36383 396 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 MED21Q13503 144 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 LDHAL6AQ6ZMR3 332 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 SCYL3Q8IZE3 742 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 KLHL29Q96CT2 875 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 MRPS26Q9BYN8 205 aaKnown RBP5.98□□□□□ -1.45
XRN1-201ENST00000264951 GDPD2Q9HCC8 539 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 HELLSQ9NRZ9 838 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 CFAP73A6NFT4 308 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 DHX9Q08211 1270 aaKnown RBP5.98□□□□□ -1.45
XRN1-201ENST00000264951 PRAM1Q96QH2 718 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 PANK2Q9BZ23 570 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 STMN3Q9NZ72 180 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 CDC25BP30305 580 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 RANBP1P43487 201 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 STX17P56962 302 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 KIF23Q02241 960 aaPredicted RBP5.98□□□□□ -1.45
XRN1-201ENST00000264951 ESCO1Q5FWF5 840 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 GALNT17Q6IS24 598 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 ANKLE2Q86XL3 938 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 EDEM3Q9BZQ6 932 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 CUEDC2Q9H467 287 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 SLC38A10Q9HBR0 1119 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 ZNF212Q9UDV6 495 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 STK38LQ9Y2H1 464 aa5.98□□□□□ -1.45
XRN1-201ENST00000264951 TMEM110-MUSTN1A8MSY1 372 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms