RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 HEXIM1O94992 359 aaKnown RBP16.76■□□□□ 0.27
CASC3-201ENST00000264645 CCDC63Q8NA47 563 aa16.76■□□□□ 0.27
CASC3-201ENST00000264645 MGARPQ8TDB4 240 aa16.76■□□□□ 0.27
CASC3-201ENST00000264645 SYMPKQ92797 1274 aaKnown RBP16.76■□□□□ 0.27
CASC3-201ENST00000264645 TAF6LQ9Y6J9 622 aa16.76■□□□□ 0.27
CASC3-201ENST00000264645 ZMYM6O95789 1325 aa16.76■□□□□ 0.27
CASC3-201ENST00000264645 PDE4BQ07343 736 aa16.76■□□□□ 0.27
CASC3-201ENST00000264645 ZNF790Q6PG37 636 aa16.76■□□□□ 0.27
CASC3-201ENST00000264645 ARHGEF25Q86VW2 580 aa16.76■□□□□ 0.27
CASC3-201ENST00000264645 UTP11Q9Y3A2 253 aaKnown RBP16.76■□□□□ 0.27
CASC3-201ENST00000264645 NR1D1P20393 614 aa16.76■□□□□ 0.27
CASC3-201ENST00000264645 CORO7P57737 925 aa16.76■□□□□ 0.27
CASC3-201ENST00000264645 KRT12Q99456 494 aa16.76■□□□□ 0.27
CASC3-201ENST00000264645 MRPL44Q9H9J2 332 aaKnown RBP16.76■□□□□ 0.27
CASC3-201ENST00000264645 PRDM11Q9NQV5 511 aa16.76■□□□□ 0.27
CASC3-201ENST00000264645 CCDC160A6NGH7 325 aa16.75■□□□□ 0.27
CASC3-201ENST00000264645 H7C1D1 291 aa16.75■□□□□ 0.27
CASC3-201ENST00000264645 CASP1P29466 404 aa16.75■□□□□ 0.27
CASC3-201ENST00000264645 NR5A1Q13285 461 aa16.75■□□□□ 0.27
CASC3-201ENST00000264645 TRIM7Q9C029 511 aa16.75■□□□□ 0.27
CASC3-201ENST00000264645 KCNK3O14649 394 aa16.75■□□□□ 0.27
CASC3-201ENST00000264645 UHMK1Q8TAS1 419 aaKnown RBP16.75■□□□□ 0.27
CASC3-201ENST00000264645 COG1Q8WTW3 980 aa16.75■□□□□ 0.27
CASC3-201ENST00000264645 FAM89AQ96GI7 184 aa16.75■□□□□ 0.27
CASC3-201ENST00000264645 GSDMAQ96QA5 445 aa16.75■□□□□ 0.27
CASC3-201ENST00000264645 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.75■□□□□ 0.27
CASC3-201ENST00000264645 SERPINA10Q9UK55 444 aa16.75■□□□□ 0.27
CASC3-201ENST00000264645 SUFUQ9UMX1 484 aa16.75■□□□□ 0.27
CASC3-201ENST00000264645 CPSF1Q10570 1443 aaKnown RBP16.75■□□□□ 0.27
CASC3-201ENST00000264645 H3BQF6 201 aa16.75■□□□□ 0.27
CASC3-201ENST00000264645 FOXN1O15353 648 aa16.75■□□□□ 0.27
CASC3-201ENST00000264645 ZNF76P36508 570 aa16.75■□□□□ 0.27
CASC3-201ENST00000264645 LETM2Q2VYF4 491 aa16.75■□□□□ 0.27
CASC3-201ENST00000264645 APOA5Q6Q788 366 aa16.75■□□□□ 0.27
CASC3-201ENST00000264645 HOOK3Q86VS8 718 aa16.75■□□□□ 0.27
CASC3-201ENST00000264645 PROSER2Q86WR7 435 aaPredicted RBP16.75■□□□□ 0.27
CASC3-201ENST00000264645 TRIM6Q9C030 488 aaPredicted RBP16.75■□□□□ 0.27
CASC3-201ENST00000264645 RTL9Q8NET4 1388 aa16.74■□□□□ 0.27
CASC3-201ENST00000264645 CETN2P41208 172 aa16.74■□□□□ 0.27
CASC3-201ENST00000264645 TRPM2O94759 1503 aa16.74■□□□□ 0.27
CASC3-201ENST00000264645 MAST3O60307 1309 aa16.74■□□□□ 0.27
CASC3-201ENST00000264645 B4DLN1 442 aa16.74■□□□□ 0.27
CASC3-201ENST00000264645 CCDC84Q86UT8 332 aaPredicted RBP16.74■□□□□ 0.27
CASC3-201ENST00000264645 DPH5Q9H2P9 285 aa16.74■□□□□ 0.27
CASC3-201ENST00000264645 IFNAR2P48551 515 aa16.74■□□□□ 0.27
CASC3-201ENST00000264645 NAPAP54920 295 aa16.74■□□□□ 0.27
CASC3-201ENST00000264645 EHHADHQ08426 723 aa16.74■□□□□ 0.27
CASC3-201ENST00000264645 ZMYM1Q5SVZ6 1142 aa16.74■□□□□ 0.27
CASC3-201ENST00000264645 C6orf163Q5TEZ5 329 aa16.74■□□□□ 0.27
CASC3-201ENST00000264645 CCDC77Q9BR77 488 aa16.74■□□□□ 0.27
CASC3-201ENST00000264645 TSKSQ9UJT2 592 aa16.74■□□□□ 0.27
CASC3-201ENST00000264645 POGZQ7Z3K3 1410 aa16.74■□□□□ 0.27
CASC3-201ENST00000264645 NBPF6Q5VWK0 638 aa16.73■□□□□ 0.27
CASC3-201ENST00000264645 DZIP1Q86YF9 867 aaKnown RBP16.73■□□□□ 0.27
CASC3-201ENST00000264645 NBPF4Q96M43 638 aa16.73■□□□□ 0.27
CASC3-201ENST00000264645 COPRSQ9NQ92 184 aa16.73■□□□□ 0.27
CASC3-201ENST00000264645 CALCOCO2Q13137 446 aa16.73■□□□□ 0.27
CASC3-201ENST00000264645 ARID4AP29374 1257 aaPredicted RBP16.73■□□□□ 0.27
CASC3-201ENST00000264645 APBA1Q02410 837 aa16.73■□□□□ 0.27
CASC3-201ENST00000264645 KLHL30Q0D2K2 578 aa16.73■□□□□ 0.27
CASC3-201ENST00000264645 RBBP5Q15291 538 aaKnown RBP16.73■□□□□ 0.27
CASC3-201ENST00000264645 REXO1L1PQ8IX06 675 aa16.73■□□□□ 0.27
CASC3-201ENST00000264645 NKIRAS1Q9NYS0 192 aa16.73■□□□□ 0.27
CASC3-201ENST00000264645 PARP1P09874 1014 aaKnown RBP16.72■□□□□ 0.27
CASC3-201ENST00000264645 CALM1P0DP23 149 aa16.72■□□□□ 0.27
CASC3-201ENST00000264645 CALM2P0DP24 149 aa16.72■□□□□ 0.27
CASC3-201ENST00000264645 CALM3P0DP25 149 aa16.72■□□□□ 0.27
CASC3-201ENST00000264645 MTMR3Q13615 1198 aa16.72■□□□□ 0.27
CASC3-201ENST00000264645 DYMQ7RTS9 669 aa16.72■□□□□ 0.27
CASC3-201ENST00000264645 PPFIBP2Q8ND30 876 aa16.72■□□□□ 0.27
CASC3-201ENST00000264645 LRRC27Q9C0I9 530 aa16.72■□□□□ 0.27
CASC3-201ENST00000264645 GEMIN8Q9NWZ8 242 aaKnown RBP16.72■□□□□ 0.27
CASC3-201ENST00000264645 STIM2Q9P246 746 aa16.72■□□□□ 0.27
CASC3-201ENST00000264645 LRWD1Q9UFC0 647 aa16.72■□□□□ 0.27
CASC3-201ENST00000264645 ZNF532Q9HCE3 1301 aa16.72■□□□□ 0.27
CASC3-201ENST00000264645 HIP1RO75146 1068 aa16.72■□□□□ 0.27
CASC3-201ENST00000264645 SASH3O75995 380 aa16.72■□□□□ 0.27
CASC3-201ENST00000264645 RASSF7Q02833 373 aa16.72■□□□□ 0.27
CASC3-201ENST00000264645 PTGDRQ13258 359 aa16.72■□□□□ 0.27
CASC3-201ENST00000264645 CCDC38Q502W7 563 aa16.72■□□□□ 0.27
CASC3-201ENST00000264645 BICDL1Q6ZP65 573 aa16.72■□□□□ 0.27
CASC3-201ENST00000264645 NOA1Q8NC60 698 aaKnown RBP16.72■□□□□ 0.27
CASC3-201ENST00000264645 NFU1Q9UMS0 254 aa16.72■□□□□ 0.27
CASC3-201ENST00000264645 KDRP35968 1356 aa16.72■□□□□ 0.27
CASC3-201ENST00000264645 RGS16O15492 202 aaPredicted RBP16.72■□□□□ 0.27
CASC3-201ENST00000264645 USP14P54578 494 aa16.72■□□□□ 0.27
CASC3-201ENST00000264645 KRT31Q15323 416 aa16.72■□□□□ 0.27
CASC3-201ENST00000264645 KRT79Q5XKE5 535 aa16.72■□□□□ 0.27
CASC3-201ENST00000264645 EPSTI1Q96J88 318 aa16.72■□□□□ 0.27
CASC3-201ENST00000264645 TUBGCP2Q9BSJ2 902 aa16.72■□□□□ 0.27
CASC3-201ENST00000264645 IQSEC2Q5JU85 1478 aa16.72■□□□□ 0.27
CASC3-201ENST00000264645 ACTN4O43707 911 aaKnown RBP16.72■□□□□ 0.27
CASC3-201ENST00000264645 ARHGEF10O15013 1369 aa16.72■□□□□ 0.27
CASC3-201ENST00000264645 AATKQ6ZMQ8 1374 aa16.72■□□□□ 0.27
CASC3-201ENST00000264645 MPHOSPH10O00566 681 aaKnown RBP16.71■□□□□ 0.27
CASC3-201ENST00000264645 CDC25AP30304 524 aa16.71■□□□□ 0.27
CASC3-201ENST00000264645 PDE6BP35913 854 aa16.71■□□□□ 0.27
CASC3-201ENST00000264645 SLC20A2Q08357 652 aa16.71■□□□□ 0.27
CASC3-201ENST00000264645 LRRC24Q50LG9 513 aa16.71■□□□□ 0.27
CASC3-201ENST00000264645 DCAF17Q5H9S7 520 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms