RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 NBPF14Q5TI25 921 aa13.35□□□□□ -0.27
SMG6-201ENST00000263073 ADD1P35611 737 aaKnown RBP13.35□□□□□ -0.27
SMG6-201ENST00000263073 MRPS25P82663 173 aaKnown RBP13.35□□□□□ -0.27
SMG6-201ENST00000263073 IFT88Q13099 833 aa13.35□□□□□ -0.27
SMG6-201ENST00000263073 CCDC13Q8IYE1 715 aa13.35□□□□□ -0.27
SMG6-201ENST00000263073 CCT6BQ92526 530 aa13.35□□□□□ -0.27
SMG6-201ENST00000263073 GBP5Q96PP8 586 aa13.35□□□□□ -0.27
SMG6-201ENST00000263073 GINS2Q9Y248 185 aa13.35□□□□□ -0.27
SMG6-201ENST00000263073 ABCC1P33527 1531 aa13.34□□□□□ -0.27
SMG6-201ENST00000263073 SNX16P57768 344 aa13.34□□□□□ -0.27
SMG6-201ENST00000263073 ADCK5Q3MIX3 580 aa13.34□□□□□ -0.27
SMG6-201ENST00000263073 ADALQ6DHV7 355 aa13.34□□□□□ -0.27
SMG6-201ENST00000263073 PTPN22Q9Y2R2 807 aa13.34□□□□□ -0.27
SMG6-201ENST00000263073 GMNNO75496 209 aa13.34□□□□□ -0.27
SMG6-201ENST00000263073 TECP42680 631 aa13.34□□□□□ -0.27
SMG6-201ENST00000263073 RNF34Q969K3 372 aa13.34□□□□□ -0.27
SMG6-201ENST00000263073 A1BGP04217 495 aa13.34□□□□□ -0.27
SMG6-201ENST00000263073 CXCR5P32302 372 aa13.34□□□□□ -0.27
SMG6-201ENST00000263073 C2orf54Q08AI8 447 aa13.34□□□□□ -0.27
SMG6-201ENST00000263073 SLC35F6Q8N357 371 aa13.34□□□□□ -0.27
SMG6-201ENST00000263073 EXOC3O60645 756 aa13.34□□□□□ -0.27
SMG6-201ENST00000263073 GUCY2DQ02846 1103 aa13.34□□□□□ -0.27
SMG6-201ENST00000263073 WHAMMP3Q1A5X7 153 aa13.34□□□□□ -0.27
SMG6-201ENST00000263073 CCDC14Q49A88 953 aa13.34□□□□□ -0.27
SMG6-201ENST00000263073 SH2D4BQ5SQS7 431 aa13.34□□□□□ -0.27
SMG6-201ENST00000263073 CTAGE3PQ8IX95 158 aa13.34□□□□□ -0.27
SMG6-201ENST00000263073 KBTBD3Q8NAB2 608 aa13.34□□□□□ -0.27
SMG6-201ENST00000263073 BANK1Q8NDB2 785 aa13.34□□□□□ -0.27
SMG6-201ENST00000263073 NUF2Q9BZD4 464 aa13.34□□□□□ -0.27
SMG6-201ENST00000263073 VCXQ9H320 206 aa13.34□□□□□ -0.27
SMG6-201ENST00000263073 MAP3K19Q56UN5 1328 aa13.34□□□□□ -0.27
SMG6-201ENST00000263073 FLT4P35916 1363 aa13.34□□□□□ -0.27
SMG6-201ENST00000263073 GAS8O95995 478 aa13.33□□□□□ -0.27
SMG6-201ENST00000263073 CYP2J2P51589 502 aa13.33□□□□□ -0.27
SMG6-201ENST00000263073 GRAMD1CQ8IYS0 662 aa13.33□□□□□ -0.27
SMG6-201ENST00000263073 GOLGA5Q8TBA6 731 aa13.33□□□□□ -0.27
SMG6-201ENST00000263073 I3L4J1 428 aa13.33□□□□□ -0.28
SMG6-201ENST00000263073 DAPK3O43293 454 aa13.33□□□□□ -0.28
SMG6-201ENST00000263073 IFNB1P01574 187 aa13.33□□□□□ -0.28
SMG6-201ENST00000263073 ETF1P62495 437 aaKnown RBP13.33□□□□□ -0.28
SMG6-201ENST00000263073 ANKRD20A3Q5VUR7 823 aa13.33□□□□□ -0.28
SMG6-201ENST00000263073 DCUN1D2Q6PH85 259 aa13.33□□□□□ -0.28
SMG6-201ENST00000263073 METTL22Q9BUU2 404 aaPredicted RBP13.33□□□□□ -0.28
SMG6-201ENST00000263073 KAT6BQ8WYB5 2073 aa13.33□□□□□ -0.28
SMG6-201ENST00000263073 CASP14P31944 242 aa13.33□□□□□ -0.28
SMG6-201ENST00000263073 RPAINQ86UA6 219 aa13.33□□□□□ -0.28
SMG6-201ENST00000263073 CSRNP2Q9H175 543 aa13.33□□□□□ -0.28
SMG6-201ENST00000263073 KDM5BQ9UGL1 1544 aa13.33□□□□□ -0.28
SMG6-201ENST00000263073 PLCH2O75038 1416 aa13.33□□□□□ -0.28
SMG6-201ENST00000263073 GOLGA8KD6RF30 607 aa13.33□□□□□ -0.28
SMG6-201ENST00000263073 KRT12Q99456 494 aa13.33□□□□□ -0.28
SMG6-201ENST00000263073 ASXL2Q76L83 1435 aa13.33□□□□□ -0.28
SMG6-201ENST00000263073 IL13P35225 146 aa13.33□□□□□ -0.28
SMG6-201ENST00000263073 LIN9Q5TKA1 542 aa13.33□□□□□ -0.28
SMG6-201ENST00000263073 CACTINQ8WUQ7 758 aaKnown RBP13.32□□□□□ -0.28
SMG6-201ENST00000263073 SLC39A2Q9NP94 309 aa13.32□□□□□ -0.28
SMG6-201ENST00000263073 PLCB1Q9NQ66 1216 aa13.32□□□□□ -0.28
SMG6-201ENST00000263073 KRT19P08727 400 aa13.32□□□□□ -0.28
SMG6-201ENST00000263073 MTMR3Q13615 1198 aa13.32□□□□□ -0.28
SMG6-201ENST00000263073 GPKOWQ92917 476 aaPredicted RBP eCLIP13.32□□□□□ -0.28
SMG6-201ENST00000263073 MYCBPQ99417 103 aaPredicted RBP13.32□□□□□ -0.28
SMG6-201ENST00000263073 ARHGEF35A5YM69 484 aa13.32□□□□□ -0.28
SMG6-201ENST00000263073 POLR2FP61218 127 aaKnown RBP13.32□□□□□ -0.28
SMG6-201ENST00000263073 RASSF7Q02833 373 aa13.32□□□□□ -0.28
SMG6-201ENST00000263073 UNC5CLQ8IV45 518 aa13.32□□□□□ -0.28
SMG6-201ENST00000263073 MAPKAPK5Q8IW41 473 aa13.32□□□□□ -0.28
SMG6-201ENST00000263073 MSANTD4Q8NCY6 345 aa13.32□□□□□ -0.28
SMG6-201ENST00000263073 GPATCH8Q9UKJ3 1502 aaKnown RBP13.32□□□□□ -0.28
SMG6-201ENST00000263073 SCRN1Q12765 414 aa13.32□□□□□ -0.28
SMG6-201ENST00000263073 TCP10Q12799 353 aa13.32□□□□□ -0.28
SMG6-201ENST00000263073 OR8K1Q8NGG5 319 aa13.32□□□□□ -0.28
SMG6-201ENST00000263073 AMFRQ9UKV5 643 aa13.32□□□□□ -0.28
SMG6-201ENST00000263073 TACC3Q9Y6A5 838 aa13.32□□□□□ -0.28
SMG6-201ENST00000263073 ABCA5Q8WWZ7 1642 aa13.32□□□□□ -0.28
SMG6-201ENST00000263073 FLOT1O75955 427 aa13.32□□□□□ -0.28
SMG6-201ENST00000263073 NONOQ15233 471 aaKnown RBP eCLIP13.32□□□□□ -0.28
SMG6-201ENST00000263073 SNCBQ16143 134 aa13.32□□□□□ -0.28
SMG6-201ENST00000263073 OGFOD1Q8N543 542 aa13.32□□□□□ -0.28
SMG6-201ENST00000263073 ZC3H12CQ9C0D7 883 aaKnown RBP13.32□□□□□ -0.28
SMG6-201ENST00000263073 NPATQ14207 1427 aa13.32□□□□□ -0.28
SMG6-201ENST00000263073 MRPL12P52815 198 aaKnown RBP13.31□□□□□ -0.28
SMG6-201ENST00000263073 TRPC3Q13507 836 aa13.31□□□□□ -0.28
SMG6-201ENST00000263073 ARID5BQ14865 1188 aa13.31□□□□□ -0.28
SMG6-201ENST00000263073 PUM3Q15397 648 aaKnown RBP13.31□□□□□ -0.28
SMG6-201ENST00000263073 DPCR1Q3MIW9 517 aa13.31□□□□□ -0.28
SMG6-201ENST00000263073 CCDC89Q8N998 374 aa13.31□□□□□ -0.28
SMG6-201ENST00000263073 FRMPD2Q68DX3 1309 aaPredicted RBP13.31□□□□□ -0.28
SMG6-201ENST00000263073 RBL2Q08999 1139 aa13.31□□□□□ -0.28
SMG6-201ENST00000263073 STAG1Q8WVM7 1258 aa13.31□□□□□ -0.28
SMG6-201ENST00000263073 WDR70Q9NW82 654 aa13.31□□□□□ -0.28
SMG6-201ENST00000263073 TEX14Q8IWB6 1497 aa13.31□□□□□ -0.28
SMG6-201ENST00000263073 RNF40O75150 1001 aa13.31□□□□□ -0.28
SMG6-201ENST00000263073 GOLGA8HP0CJ92 632 aa13.31□□□□□ -0.28
SMG6-201ENST00000263073 ADCY8P40145 1251 aa13.31□□□□□ -0.28
SMG6-201ENST00000263073 EHHADHQ08426 723 aa13.31□□□□□ -0.28
SMG6-201ENST00000263073 KAZNQ674X7 775 aa13.31□□□□□ -0.28
SMG6-201ENST00000263073 NXNQ6DKJ4 435 aa13.31□□□□□ -0.28
SMG6-201ENST00000263073 TPH2Q8IWU9 490 aa13.31□□□□□ -0.28
SMG6-201ENST00000263073 HAUS7Q99871 368 aa13.31□□□□□ -0.28
SMG6-201ENST00000263073 HYOU1Q9Y4L1 999 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms