RNA–Protein interactions for RNA: ENST00000262901.4

SIM1-201, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 3,999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-201ENST00000262901 ZSCAN29Q8IWY8 852 aaPredicted RBP10.81□□□□□ -0.68
SIM1-201ENST00000262901 C10orf67Q8IYJ2 551 aa10.81□□□□□ -0.68
SIM1-201ENST00000262901 OGFOD1Q8N543 542 aa10.81□□□□□ -0.68
SIM1-201ENST00000262901 TSPY2A6NKD2 308 aa10.81□□□□□ -0.68
SIM1-201ENST00000262901 COQ9O75208 318 aa10.81□□□□□ -0.68
SIM1-201ENST00000262901 LRMPQ12912 555 aa10.81□□□□□ -0.68
SIM1-201ENST00000262901 CCDC150Q8NCX0 1101 aa10.81□□□□□ -0.68
SIM1-201ENST00000262901 PDGFDQ9GZP0 370 aaPredicted RBP10.81□□□□□ -0.68
SIM1-201ENST00000262901 TPCN1Q9ULQ1 816 aa10.81□□□□□ -0.68
SIM1-201ENST00000262901 STX8Q9UNK0 236 aa10.81□□□□□ -0.68
SIM1-201ENST00000262901 CICQ96RK0 1608 aaPredicted RBP10.81□□□□□ -0.68
SIM1-201ENST00000262901 N4BP2Q86UW6 1770 aaPredicted RBP10.81□□□□□ -0.68
SIM1-201ENST00000262901 FAM163BP0C2L3 166 aa10.81□□□□□ -0.68
SIM1-201ENST00000262901 PODNQ7Z5L7 613 aa10.81□□□□□ -0.68
SIM1-201ENST00000262901 TTC6Q86TZ1 520 aa10.81□□□□□ -0.68
SIM1-201ENST00000262901 DHX58Q96C10 678 aa10.81□□□□□ -0.68
SIM1-201ENST00000262901 DBNDD1Q9H9R9 158 aa10.81□□□□□ -0.68
SIM1-201ENST00000262901 KARSQ15046 597 aaKnown RBP10.8□□□□□ -0.68
SIM1-201ENST00000262901 RTN1Q16799 776 aa10.8□□□□□ -0.68
SIM1-201ENST00000262901 SPECC1Q5M775 1068 aa10.8□□□□□ -0.68
SIM1-201ENST00000262901 RPAINQ86UA6 219 aa10.8□□□□□ -0.68
SIM1-201ENST00000262901 ARMT1Q9H993 441 aa10.8□□□□□ -0.68
SIM1-201ENST00000262901 BIN2Q9UBW5 565 aaPredicted RBP10.8□□□□□ -0.68
SIM1-201ENST00000262901 MTMR6Q9Y217 621 aa10.8□□□□□ -0.68
SIM1-201ENST00000262901 CD2APQ9Y5K6 639 aa10.8□□□□□ -0.68
SIM1-201ENST00000262901 ANKRD36CQ5JPF3 1778 aa10.8□□□□□ -0.68
SIM1-201ENST00000262901 KLRG2A4D1S0 409 aaPredicted RBP10.8□□□□□ -0.68
SIM1-201ENST00000262901 C11orf91Q3C1V1 193 aa10.8□□□□□ -0.68
SIM1-201ENST00000262901 CRACR2AQ9BSW2 395 aa10.8□□□□□ -0.68
SIM1-201ENST00000262901 MYL10Q9BUA6 226 aa10.8□□□□□ -0.68
SIM1-201ENST00000262901 DSCC1Q9BVC3 393 aa10.8□□□□□ -0.68
SIM1-201ENST00000262901 B4E1Z4 1266 aa10.8□□□□□ -0.68
SIM1-201ENST00000262901 SLU7O95391 586 aaKnown RBP10.8□□□□□ -0.68
SIM1-201ENST00000262901 UBA7P41226 1012 aa10.8□□□□□ -0.68
SIM1-201ENST00000262901 SCN7AQ01118 1682 aa10.8□□□□□ -0.68
SIM1-201ENST00000262901 TAOK3Q9H2K8 898 aa10.8□□□□□ -0.68
SIM1-201ENST00000262901 JRKLQ9Y4A0 524 aa10.8□□□□□ -0.68
SIM1-201ENST00000262901 A0A087WWV3 80 aa10.79□□□□□ -0.68
SIM1-201ENST00000262901 MCM6Q14566 821 aa10.79□□□□□ -0.68
SIM1-201ENST00000262901 CTR9Q6PD62 1173 aa10.79□□□□□ -0.68
SIM1-201ENST00000262901 EXOC8Q8IYI6 725 aa10.79□□□□□ -0.68
SIM1-201ENST00000262901 IRAK4Q9NWZ3 460 aa10.79□□□□□ -0.68
SIM1-201ENST00000262901 FAM160A1Q05DH4 1040 aa10.79□□□□□ -0.68
SIM1-201ENST00000262901 ZNF444Q8N0Y2 327 aaPredicted RBP10.79□□□□□ -0.68
SIM1-201ENST00000262901 KRT222Q8N1A0 295 aa10.79□□□□□ -0.68
SIM1-201ENST00000262901 SEPT11Q9NVA2 429 aaKnown RBP10.79□□□□□ -0.68
SIM1-201ENST00000262901 POLLQ9UGP5 575 aa10.79□□□□□ -0.68
SIM1-201ENST00000262901 MED23Q9ULK4 1368 aa10.79□□□□□ -0.68
SIM1-201ENST00000262901 NR1I2O75469 434 aa10.79□□□□□ -0.68
SIM1-201ENST00000262901 KLRK1P26718 216 aa10.79□□□□□ -0.68
SIM1-201ENST00000262901 MATR3P43243 847 aaKnown RBP eCLIP10.79□□□□□ -0.68
SIM1-201ENST00000262901 ZNF287Q9HBT7 754 aa10.79□□□□□ -0.68
SIM1-201ENST00000262901 LZTFL1Q9NQ48 299 aa10.79□□□□□ -0.68
SIM1-201ENST00000262901 BMP2KQ9NSY1 1161 aaPredicted RBP10.79□□□□□ -0.68
SIM1-201ENST00000262901 TTF2Q9UNY4 1162 aaKnown RBP10.79□□□□□ -0.68
SIM1-201ENST00000262901 RREB1Q92766 1687 aa10.78□□□□□ -0.68
SIM1-201ENST00000262901 MTIF2P46199 727 aaKnown RBP10.78□□□□□ -0.68
SIM1-201ENST00000262901 EIF6P56537 245 aaKnown RBP10.78□□□□□ -0.68
SIM1-201ENST00000262901 BMS1Q14692 1282 aaKnown RBP10.78□□□□□ -0.68
SIM1-201ENST00000262901 TDRD12Q587J7 1177 aaKnown RBP10.78□□□□□ -0.68
SIM1-201ENST00000262901 CCDC148Q8NFR7 591 aa10.78□□□□□ -0.68
SIM1-201ENST00000262901 TDRD7Q8NHU6 1098 aaKnown RBP10.78□□□□□ -0.68
SIM1-201ENST00000262901 OSBP2Q969R2 916 aa10.78□□□□□ -0.68
SIM1-201ENST00000262901 CLSTN2Q9H4D0 955 aa10.78□□□□□ -0.68
SIM1-201ENST00000262901 AATFQ9NY61 560 aaKnown RBP eCLIP10.78□□□□□ -0.68
SIM1-201ENST00000262901 ARHGAP27Q6ZUM4 889 aa10.78□□□□□ -0.68
SIM1-201ENST00000262901 PHKBQ93100 1093 aa10.78□□□□□ -0.68
SIM1-201ENST00000262901 LSG1Q9H089 658 aaKnown RBP10.78□□□□□ -0.68
SIM1-201ENST00000262901 ZNF75DP51815 510 aa10.78□□□□□ -0.68
SIM1-201ENST00000262901 SPA17Q15506 151 aa10.78□□□□□ -0.68
SIM1-201ENST00000262901 AOC3Q16853 763 aa10.78□□□□□ -0.68
SIM1-201ENST00000262901 RRAGBQ5VZM2 374 aa10.78□□□□□ -0.68
SIM1-201ENST00000262901 TRMT1LQ7Z2T5 733 aaKnown RBP10.78□□□□□ -0.68
SIM1-201ENST00000262901 CACNA2D4Q7Z3S7 1137 aa10.78□□□□□ -0.68
SIM1-201ENST00000262901 ZNF589Q86UQ0 364 aaPredicted RBP10.78□□□□□ -0.68
SIM1-201ENST00000262901 PAX3P23760 479 aa10.77□□□□□ -0.68
SIM1-201ENST00000262901 LMAN1P49257 510 aa10.77□□□□□ -0.68
SIM1-201ENST00000262901 PIAS4Q8N2W9 510 aaPredicted RBP10.77□□□□□ -0.68
SIM1-201ENST00000262901 FEZ1Q99689 392 aa10.77□□□□□ -0.68
SIM1-201ENST00000262901 UBA5Q9GZZ9 404 aa10.77□□□□□ -0.68
SIM1-201ENST00000262901 PICK1Q9NRD5 415 aa10.77□□□□□ -0.68
SIM1-201ENST00000262901 ZNF446Q9NWS9 450 aa10.77□□□□□ -0.68
SIM1-201ENST00000262901 LCMT1Q9UIC8 334 aa10.77□□□□□ -0.68
SIM1-201ENST00000262901 USP17L3A6NCW0 530 aa10.77□□□□□ -0.69
SIM1-201ENST00000262901 USP17L4A6NCW7 530 aa10.77□□□□□ -0.69
SIM1-201ENST00000262901 TPD52L2O43399 206 aaKnown RBP10.77□□□□□ -0.69
SIM1-201ENST00000262901 ECE2O60344 883 aa10.77□□□□□ -0.69
SIM1-201ENST00000262901 YEATS4O95619 227 aa10.77□□□□□ -0.69
SIM1-201ENST00000262901 HSPD1P10809 573 aaKnown RBP10.77□□□□□ -0.69
SIM1-201ENST00000262901 MECOMQ03112 1051 aa10.77□□□□□ -0.69
SIM1-201ENST00000262901 C15orf52Q6ZUT6 534 aaKnown RBP10.77□□□□□ -0.69
SIM1-201ENST00000262901 USP17L1Q7RTZ2 530 aa10.77□□□□□ -0.69
SIM1-201ENST00000262901 TXNRD3Q86VQ6 643 aa10.77□□□□□ -0.69
SIM1-201ENST00000262901 TEX11Q8IYF3 940 aa10.77□□□□□ -0.69
SIM1-201ENST00000262901 MAP4K1Q92918 833 aa10.77□□□□□ -0.69
SIM1-201ENST00000262901 TEKT1Q969V4 418 aa10.77□□□□□ -0.69
SIM1-201ENST00000262901 MYO1BO43795 1136 aa10.77□□□□□ -0.69
SIM1-201ENST00000262901 LARGE1O95461 756 aa10.77□□□□□ -0.69
SIM1-201ENST00000262901 PRDX5P30044 214 aa10.77□□□□□ -0.69
SIM1-201ENST00000262901 CDR1P51861 262 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms