RNA–Protein interactions for RNA: ENST00000262812.8

COPE-201, Transcript of coatomer protein complex subunit epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPE, Length 1,141 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-201ENST00000262812 MORF4L1Q9UBU8 362 aa21.93■■□□□ 1.1
COPE-201ENST00000262812 CCDC171Q6TFL3 1326 aa21.92■■□□□ 1.1
COPE-201ENST00000262812 FGAP02671 866 aa21.92■■□□□ 1.1
COPE-201ENST00000262812 HSPD1P10809 573 aaKnown RBP21.92■■□□□ 1.1
COPE-201ENST00000262812 SAMD1Q6SPF0 538 aaPredicted RBP21.92■■□□□ 1.1
COPE-201ENST00000262812 COA7Q96BR5 231 aa21.92■■□□□ 1.1
COPE-201ENST00000262812 CLIP2Q9UDT6 1046 aa21.92■■□□□ 1.1
COPE-201ENST00000262812 ZSWIM8A7E2V4 1837 aa21.92■■□□□ 1.1
COPE-201ENST00000262812 GSPT1P15170 499 aaKnown RBP21.91■■□□□ 1.1
COPE-201ENST00000262812 FLT3LGP49771 235 aa21.91■■□□□ 1.1
COPE-201ENST00000262812 TFAP4Q01664 338 aa21.91■■□□□ 1.1
COPE-201ENST00000262812 ALX1Q15699 326 aa21.91■■□□□ 1.1
COPE-201ENST00000262812 CCAR1Q8IX12 1150 aaKnown RBP21.91■■□□□ 1.1
COPE-201ENST00000262812 ARMC5Q96C12 935 aa21.91■■□□□ 1.1
COPE-201ENST00000262812 VCPKMTQ9H867 229 aa21.91■■□□□ 1.1
COPE-201ENST00000262812 BIN2Q9UBW5 565 aaPredicted RBP21.91■■□□□ 1.1
COPE-201ENST00000262812 HTTP42858 3142 aa21.9■■□□□ 1.1
COPE-201ENST00000262812 HIP1O00291 1037 aa21.9■■□□□ 1.1
COPE-201ENST00000262812 TSPY3P0CV98 308 aa21.9■■□□□ 1.1
COPE-201ENST00000262812 TSPY8P0CW00 308 aa21.9■■□□□ 1.1
COPE-201ENST00000262812 ERVK-9P63128 1117 aa21.9■■□□□ 1.1
COPE-201ENST00000262812 ERVK-24P63145 666 aa21.9■■□□□ 1.1
COPE-201ENST00000262812 COG2Q14746 738 aa21.9■■□□□ 1.1
COPE-201ENST00000262812 GTF3C2Q8WUA4 911 aaPredicted RBP21.9■■□□□ 1.1
COPE-201ENST00000262812 LPAR1Q92633 364 aa21.9■■□□□ 1.1
COPE-201ENST00000262812 CNMDO75829 334 aa21.89■■□□□ 1.09
COPE-201ENST00000262812 GRK4P32298 578 aa21.89■■□□□ 1.09
COPE-201ENST00000262812 MFAP1P55081 439 aaKnown RBP21.89■■□□□ 1.09
COPE-201ENST00000262812 ZNF333Q96JL9 665 aa21.89■■□□□ 1.09
COPE-201ENST00000262812 GOPCQ9HD26 462 aa21.89■■□□□ 1.09
COPE-201ENST00000262812 HOXC10Q9NYD6 342 aa21.89■■□□□ 1.09
COPE-201ENST00000262812 NYAP2Q9P242 653 aa21.89■■□□□ 1.09
COPE-201ENST00000262812 RABGAP1Q9Y3P9 1069 aa21.89■■□□□ 1.09
COPE-201ENST00000262812 TACC3Q9Y6A5 838 aa21.89■■□□□ 1.09
COPE-201ENST00000262812 SPDYE16A6NNV3 312 aaPredicted RBP21.88■■□□□ 1.09
COPE-201ENST00000262812 RGS19P49795 217 aa21.88■■□□□ 1.09
COPE-201ENST00000262812 HAND2P61296 217 aa21.88■■□□□ 1.09
COPE-201ENST00000262812 NEDD1Q8NHV4 660 aa21.88■■□□□ 1.09
COPE-201ENST00000262812 CEP95Q96GE4 821 aa21.88■■□□□ 1.09
COPE-201ENST00000262812 TOMM22Q9NS69 142 aa21.88■■□□□ 1.09
COPE-201ENST00000262812 BTBD7Q9P203 1132 aa21.88■■□□□ 1.09
COPE-201ENST00000262812 IGKV6D-41A0A0C4DH26 115 aa21.87■■□□□ 1.09
COPE-201ENST00000262812 ADCY3O60266 1144 aa21.87■■□□□ 1.09
COPE-201ENST00000262812 RANBP6O60518 1105 aaKnown RBP21.87■■□□□ 1.09
COPE-201ENST00000262812 FLOT1O75955 427 aa21.87■■□□□ 1.09
COPE-201ENST00000262812 TMEM106CQ9BVX2 250 aa21.87■■□□□ 1.09
COPE-201ENST00000262812 PORCNQ9H237 461 aa21.87■■□□□ 1.09
COPE-201ENST00000262812 CWC22Q9HCG8 908 aaKnown RBP21.87■■□□□ 1.09
COPE-201ENST00000262812 MTMR4Q9NYA4 1195 aa21.87■■□□□ 1.09
COPE-201ENST00000262812 ANAPC4Q9UJX5 808 aa21.87■■□□□ 1.09
COPE-201ENST00000262812 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.87■■□□□ 1.09
COPE-201ENST00000262812 POTEFA5A3E0 1075 aa21.86■■□□□ 1.09
COPE-201ENST00000262812 TSPY2A6NKD2 308 aa21.86■■□□□ 1.09
COPE-201ENST00000262812 F5H6K3 240 aa21.86■■□□□ 1.09
COPE-201ENST00000262812 WDR46O15213 610 aaKnown RBP21.86■■□□□ 1.09
COPE-201ENST00000262812 ELNP15502 786 aa21.86■■□□□ 1.09
COPE-201ENST00000262812 DSG3P32926 999 aa21.86■■□□□ 1.09
COPE-201ENST00000262812 KLRC3Q07444 240 aa21.86■■□□□ 1.09
COPE-201ENST00000262812 RRP12Q5JTH9 1297 aaKnown RBP21.86■■□□□ 1.09
COPE-201ENST00000262812 FAM83BQ5T0W9 1011 aa21.86■■□□□ 1.09
COPE-201ENST00000262812 WDR78Q5VTH9 848 aa21.86■■□□□ 1.09
COPE-201ENST00000262812 NUP88Q99567 741 aaPredicted RBP21.86■■□□□ 1.09
COPE-201ENST00000262812 TTLL1O95922 423 aa21.85■■□□□ 1.09
COPE-201ENST00000262812 MAPK4P31152 587 aa21.85■■□□□ 1.09
COPE-201ENST00000262812 MLLT1Q03111 559 aaPredicted RBP21.85■■□□□ 1.09
COPE-201ENST00000262812 SKAP1Q86WV1 359 aa21.85■■□□□ 1.09
COPE-201ENST00000262812 LRRC47Q8N1G4 583 aaKnown RBP21.85■■□□□ 1.09
COPE-201ENST00000262812 CHMP4CQ96CF2 233 aa21.85■■□□□ 1.09
COPE-201ENST00000262812 GJD2Q9UKL4 321 aa21.85■■□□□ 1.09
COPE-201ENST00000262812 NMT2O60551 498 aa21.84■■□□□ 1.09
COPE-201ENST00000262812 CCNA1P78396 465 aa21.84■■□□□ 1.09
COPE-201ENST00000262812 MTFR1Q15390 333 aa21.84■■□□□ 1.09
COPE-201ENST00000262812 LBX2Q6XYB7 198 aa21.84■■□□□ 1.09
COPE-201ENST00000262812 CENPQQ7L2Z9 268 aaPredicted RBP21.84■■□□□ 1.09
COPE-201ENST00000262812 PLEKHH3Q7Z736 793 aa21.84■■□□□ 1.09
COPE-201ENST00000262812 SLAIN1Q8ND83 568 aa21.84■■□□□ 1.09
COPE-201ENST00000262812 ATG4CQ96DT6 458 aa21.84■■□□□ 1.09
COPE-201ENST00000262812 FBXO28Q9NVF7 368 aa21.84■■□□□ 1.09
COPE-201ENST00000262812 NDUFB10O96000 172 aa21.83■■□□□ 1.09
COPE-201ENST00000262812 EN2P19622 333 aaPredicted RBP21.83■■□□□ 1.09
COPE-201ENST00000262812 CYP2B6P20813 491 aa21.83■■□□□ 1.09
COPE-201ENST00000262812 IRF5Q13568 498 aa21.83■■□□□ 1.09
COPE-201ENST00000262812 PLS1Q14651 629 aa21.83■■□□□ 1.09
COPE-201ENST00000262812 GPR142Q7Z601 462 aa21.83■■□□□ 1.09
COPE-201ENST00000262812 MKL1Q969V6 931 aa21.83■■□□□ 1.09
COPE-201ENST00000262812 IL25Q9H293 177 aa21.83■■□□□ 1.09
COPE-201ENST00000262812 ZNF213O14771 459 aa21.82■■□□□ 1.08
COPE-201ENST00000262812 ORC4O43929 436 aa21.82■■□□□ 1.08
COPE-201ENST00000262812 UBXN2AP68543 259 aa21.82■■□□□ 1.08
COPE-201ENST00000262812 NUDT12Q9BQG2 462 aa21.82■■□□□ 1.08
COPE-201ENST00000262812 IL17RBQ9NRM6 502 aa21.82■■□□□ 1.08
COPE-201ENST00000262812 STX8Q9UNK0 236 aa21.82■■□□□ 1.08
COPE-201ENST00000262812 CENPFP49454 3210 aa21.82■■□□□ 1.08
COPE-201ENST00000262812 FGRP09769 529 aa21.81■■□□□ 1.08
COPE-201ENST00000262812 CHMLP26374 656 aa21.81■■□□□ 1.08
COPE-201ENST00000262812 SLFN13Q68D06 897 aa21.81■■□□□ 1.08
COPE-201ENST00000262812 MFSD6Q6ZSS7 791 aa21.81■■□□□ 1.08
COPE-201ENST00000262812 PXYLP1Q8TE99 480 aa21.81■■□□□ 1.08
COPE-201ENST00000262812 MOV10L1Q9BXT6 1211 aaKnown RBP21.81■■□□□ 1.08
COPE-201ENST00000262812 NBPF3Q9H094 633 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms