RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 SPATA1Q5VX52 437 aa18.61■□□□□ 0.57
TM9SF1-201ENST00000261789 PIK3AP1Q6ZUJ8 805 aa18.61■□□□□ 0.57
TM9SF1-201ENST00000261789 IGSF22Q8N9C0 903 aa18.61■□□□□ 0.57
TM9SF1-201ENST00000261789 TNFRSF25Q93038 417 aa18.61■□□□□ 0.57
TM9SF1-201ENST00000261789 TFCP2L1Q9NZI6 479 aa18.61■□□□□ 0.57
TM9SF1-201ENST00000261789 DUOX1Q9NRD9 1551 aa18.6■□□□□ 0.57
TM9SF1-201ENST00000261789 GABPB1Q06547 395 aaPredicted RBP18.6■□□□□ 0.57
TM9SF1-201ENST00000261789 TERF2Q15554 542 aa18.6■□□□□ 0.57
TM9SF1-201ENST00000261789 TMTC3Q6ZXV5 915 aa18.6■□□□□ 0.57
TM9SF1-201ENST00000261789 PPP1R3GB7ZBB8 358 aa18.6■□□□□ 0.57
TM9SF1-201ENST00000261789 AKR1B15C9JRZ8 316 aaPredicted RBP18.6■□□□□ 0.57
TM9SF1-201ENST00000261789 MCM7P33993 719 aa18.6■□□□□ 0.57
TM9SF1-201ENST00000261789 CCT6AP40227 531 aaKnown RBP18.6■□□□□ 0.57
TM9SF1-201ENST00000261789 RAD9BQ6WBX8 426 aa18.6■□□□□ 0.57
TM9SF1-201ENST00000261789 CREBRFQ8IUR6 639 aa18.6■□□□□ 0.57
TM9SF1-201ENST00000261789 KIFC2Q96AC6 838 aa18.6■□□□□ 0.57
TM9SF1-201ENST00000261789 MYH13Q9UKX3 1938 aa18.6■□□□□ 0.57
TM9SF1-201ENST00000261789 PNMA6AP0CW24 399 aaPredicted RBP18.59■□□□□ 0.57
TM9SF1-201ENST00000261789 MAP3K9P80192 1104 aa18.59■□□□□ 0.57
TM9SF1-201ENST00000261789 MECOMQ03112 1051 aa18.59■□□□□ 0.57
TM9SF1-201ENST00000261789 IL17AQ16552 155 aa18.59■□□□□ 0.57
TM9SF1-201ENST00000261789 BRIP1Q9BX63 1249 aa18.59■□□□□ 0.57
TM9SF1-201ENST00000261789 CTNND2Q9UQB3 1225 aa18.59■□□□□ 0.57
TM9SF1-201ENST00000261789 CNTNAP5Q8WYK1 1306 aa18.59■□□□□ 0.57
TM9SF1-201ENST00000261789 EFCAB8A8MWE9 144 aa18.59■□□□□ 0.57
TM9SF1-201ENST00000261789 KIF20AO95235 890 aa18.59■□□□□ 0.57
TM9SF1-201ENST00000261789 UBE4AQ14139 1066 aa18.59■□□□□ 0.57
TM9SF1-201ENST00000261789 BMS1Q14692 1282 aaKnown RBP18.59■□□□□ 0.57
TM9SF1-201ENST00000261789 PPP2R5BQ15173 497 aa18.59■□□□□ 0.57
TM9SF1-201ENST00000261789 ZSWIM4Q9H7M6 989 aa18.59■□□□□ 0.57
TM9SF1-201ENST00000261789 ADD3Q9UEY8 706 aaKnown RBP18.59■□□□□ 0.57
TM9SF1-201ENST00000261789 XDHP47989 1333 aa18.58■□□□□ 0.57
TM9SF1-201ENST00000261789 PRDX5P30044 214 aa18.58■□□□□ 0.57
TM9SF1-201ENST00000261789 FERMT2Q96AC1 680 aa18.58■□□□□ 0.57
TM9SF1-201ENST00000261789 NSUN4Q96CB9 384 aaKnown RBP18.58■□□□□ 0.57
TM9SF1-201ENST00000261789 MTRQ99707 1265 aa18.58■□□□□ 0.57
TM9SF1-201ENST00000261789 BRMS1Q9HCU9 246 aa18.58■□□□□ 0.57
TM9SF1-201ENST00000261789 RBM28Q9NW13 759 aaKnown RBP18.58■□□□□ 0.57
TM9SF1-201ENST00000261789 BSDC1Q9NW68 430 aaPredicted RBP18.58■□□□□ 0.57
TM9SF1-201ENST00000261789 MAPK8IP1Q9UQF2 711 aa18.58■□□□□ 0.57
TM9SF1-201ENST00000261789 GTF2E1P29083 439 aaPredicted RBP18.58■□□□□ 0.56
TM9SF1-201ENST00000261789 CASP14P31944 242 aa18.58■□□□□ 0.56
TM9SF1-201ENST00000261789 NLRP5P59047 1200 aa18.58■□□□□ 0.56
TM9SF1-201ENST00000261789 TEX35Q5T0J7 233 aa18.58■□□□□ 0.56
TM9SF1-201ENST00000261789 CCDC12Q8WUD4 166 aaPredicted RBP18.58■□□□□ 0.56
TM9SF1-201ENST00000261789 SRRTQ9BXP5 876 aaKnown RBP18.58■□□□□ 0.56
TM9SF1-201ENST00000261789 MRFAP1Q9Y605 127 aa18.58■□□□□ 0.56
TM9SF1-201ENST00000261789 ATP2C1P98194 919 aaPredicted RBP18.57■□□□□ 0.56
TM9SF1-201ENST00000261789 PPP2R3AQ06190 1150 aa18.57■□□□□ 0.56
TM9SF1-201ENST00000261789 CDKAL1Q5VV42 579 aa18.57■□□□□ 0.56
TM9SF1-201ENST00000261789 PPFIBP1Q86W92 1011 aa18.57■□□□□ 0.56
TM9SF1-201ENST00000261789 CTCFLQ8NI51 663 aaPredicted RBP18.57■□□□□ 0.56
TM9SF1-201ENST00000261789 GSDMAQ96QA5 445 aa18.57■□□□□ 0.56
TM9SF1-201ENST00000261789 DCP1AQ9NPI6 582 aaPredicted RBP18.57■□□□□ 0.56
TM9SF1-201ENST00000261789 ZRANB2O95218 330 aaKnown RBP eCLIP18.57■□□□□ 0.56
TM9SF1-201ENST00000261789 PLA2G4AP47712 749 aa18.57■□□□□ 0.56
TM9SF1-201ENST00000261789 FXR1P51114 621 aaKnown RBP eCLIP18.57■□□□□ 0.56
TM9SF1-201ENST00000261789 TMCO3Q6UWJ1 677 aa18.57■□□□□ 0.56
TM9SF1-201ENST00000261789 SLC51AQ86UW1 340 aa18.57■□□□□ 0.56
TM9SF1-201ENST00000261789 ABL1P00519 1130 aa18.56■□□□□ 0.56
TM9SF1-201ENST00000261789 FGRP09769 529 aa18.56■□□□□ 0.56
TM9SF1-201ENST00000261789 RASGRP4Q8TDF6 673 aa18.56■□□□□ 0.56
TM9SF1-201ENST00000261789 CCDC34Q96HJ3 373 aa18.56■□□□□ 0.56
TM9SF1-201ENST00000261789 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.56■□□□□ 0.56
TM9SF1-201ENST00000261789 WNK3Q9BYP7 1800 aa18.56■□□□□ 0.56
TM9SF1-201ENST00000261789 GOLGA6L9A6NEM1 432 aa18.56■□□□□ 0.56
TM9SF1-201ENST00000261789 RNF225M0QZC1 329 aaPredicted RBP18.56■□□□□ 0.56
TM9SF1-201ENST00000261789 CCDC175P0C221 793 aa18.56■□□□□ 0.56
TM9SF1-201ENST00000261789 PBX1P40424 430 aa18.56■□□□□ 0.56
TM9SF1-201ENST00000261789 E2F4Q16254 413 aa18.56■□□□□ 0.56
TM9SF1-201ENST00000261789 RRAGBQ5VZM2 374 aa18.56■□□□□ 0.56
TM9SF1-201ENST00000261789 GPKOWQ92917 476 aaPredicted RBP eCLIP18.56■□□□□ 0.56
TM9SF1-201ENST00000261789 VPS16Q9H269 839 aa18.56■□□□□ 0.56
TM9SF1-201ENST00000261789 MTMR7Q9Y216 660 aa18.56■□□□□ 0.56
TM9SF1-201ENST00000261789 ZNF652Q9Y2D9 606 aa18.56■□□□□ 0.56
TM9SF1-201ENST00000261789 ADGRG1Q9Y653 693 aa18.56■□□□□ 0.56
TM9SF1-201ENST00000261789 NRAPQ86VF7 1730 aa18.55■□□□□ 0.56
TM9SF1-201ENST00000261789 DDAH1O94760 285 aa18.55■□□□□ 0.56
TM9SF1-201ENST00000261789 GYPCP04921 128 aa18.55■□□□□ 0.56
TM9SF1-201ENST00000261789 CALM1P0DP23 149 aa18.55■□□□□ 0.56
TM9SF1-201ENST00000261789 CALM2P0DP24 149 aa18.55■□□□□ 0.56
TM9SF1-201ENST00000261789 CALM3P0DP25 149 aa18.55■□□□□ 0.56
TM9SF1-201ENST00000261789 SCG2P13521 617 aa18.55■□□□□ 0.56
TM9SF1-201ENST00000261789 PANX2Q96RD6 677 aa18.55■□□□□ 0.56
TM9SF1-201ENST00000261789 NOL10Q9BSC4 688 aaKnown RBP18.55■□□□□ 0.56
TM9SF1-201ENST00000261789 SPATA31A1Q5TZJ5 1347 aa18.55■□□□□ 0.56
TM9SF1-201ENST00000261789 TFRCP02786 760 aaKnown RBP18.55■□□□□ 0.56
TM9SF1-201ENST00000261789 SF3B3Q15393 1217 aaKnown RBP18.55■□□□□ 0.56
TM9SF1-201ENST00000261789 TBC1D9BQ66K14 1250 aa18.55■□□□□ 0.56
TM9SF1-201ENST00000261789 TXNRD3Q86VQ6 643 aa18.55■□□□□ 0.56
TM9SF1-201ENST00000261789 ARGLU1Q9NWB6 273 aaPredicted RBP18.55■□□□□ 0.56
TM9SF1-201ENST00000261789 TSPY2A6NKD2 308 aa18.54■□□□□ 0.56
TM9SF1-201ENST00000261789 PDXDC2PQ6P474 469 aa18.54■□□□□ 0.56
TM9SF1-201ENST00000261789 LINC00116Q8NCU8 138 aa18.54■□□□□ 0.56
TM9SF1-201ENST00000261789 ZBTB9Q96C00 473 aa18.54■□□□□ 0.56
TM9SF1-201ENST00000261789 MFAP3LO75121 409 aa18.54■□□□□ 0.56
TM9SF1-201ENST00000261789 SASH3O75995 380 aa18.54■□□□□ 0.56
TM9SF1-201ENST00000261789 USP17L8P0C7I0 530 aa18.54■□□□□ 0.56
TM9SF1-201ENST00000261789 KRT31Q15323 416 aa18.54■□□□□ 0.56
TM9SF1-201ENST00000261789 FBXO33Q7Z6M2 555 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms