RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 ZBTB7AO95365 584 aa16.44■□□□□ 0.22
SFSWAP-201ENST00000261674 CDC25AP30304 524 aa16.44■□□□□ 0.22
SFSWAP-201ENST00000261674 IGHMBP2P38935 993 aaKnown RBP16.44■□□□□ 0.22
SFSWAP-201ENST00000261674 PARP10Q53GL7 1025 aa16.44■□□□□ 0.22
SFSWAP-201ENST00000261674 RC3H1Q5TC82 1133 aaKnown RBP16.44■□□□□ 0.22
SFSWAP-201ENST00000261674 ENOX1Q8TC92 643 aaKnown RBP16.44■□□□□ 0.22
SFSWAP-201ENST00000261674 ZFP91Q96JP5 570 aaPredicted RBP16.44■□□□□ 0.22
SFSWAP-201ENST00000261674 VPS16Q9H269 839 aa16.44■□□□□ 0.22
SFSWAP-201ENST00000261674 CCDC175P0C221 793 aa16.44■□□□□ 0.22
SFSWAP-201ENST00000261674 RNF216Q9NWF9 866 aaPredicted RBP16.44■□□□□ 0.22
SFSWAP-201ENST00000261674 CEP131Q9UPN4 1083 aa16.44■□□□□ 0.22
SFSWAP-201ENST00000261674 A0A087X0B3 334 aa16.43■□□□□ 0.22
SFSWAP-201ENST00000261674 SYMPKQ92797 1274 aaKnown RBP16.43■□□□□ 0.22
SFSWAP-201ENST00000261674 EEF2KMTQ96G04 330 aa16.43■□□□□ 0.22
SFSWAP-201ENST00000261674 ATF5Q9Y2D1 282 aaPredicted RBP16.43■□□□□ 0.22
SFSWAP-201ENST00000261674 TJP1Q07157 1748 aa16.43■□□□□ 0.22
SFSWAP-201ENST00000261674 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.43■□□□□ 0.22
SFSWAP-201ENST00000261674 TNKSO95271 1327 aa16.43■□□□□ 0.22
SFSWAP-201ENST00000261674 SASH3O75995 380 aa16.43■□□□□ 0.22
SFSWAP-201ENST00000261674 CD44P16070 742 aaKnown RBP16.43■□□□□ 0.22
SFSWAP-201ENST00000261674 XBP1P17861 261 aa16.43■□□□□ 0.22
SFSWAP-201ENST00000261674 KLRK1P26718 216 aa16.43■□□□□ 0.22
SFSWAP-201ENST00000261674 OAS2P29728 719 aaKnown RBP16.43■□□□□ 0.22
SFSWAP-201ENST00000261674 MORC3Q14149 939 aa16.43■□□□□ 0.22
SFSWAP-201ENST00000261674 RASSF8Q8NHQ8 419 aa16.43■□□□□ 0.22
SFSWAP-201ENST00000261674 MYH15Q9Y2K3 1946 aa16.43■□□□□ 0.22
SFSWAP-201ENST00000261674 PAPPAQ13219 1627 aa16.43■□□□□ 0.22
SFSWAP-201ENST00000261674 RHOXF2BP0C7M4 288 aa16.43■□□□□ 0.22
SFSWAP-201ENST00000261674 CASP14P31944 242 aa16.43■□□□□ 0.22
SFSWAP-201ENST00000261674 GYG1P46976 350 aa16.43■□□□□ 0.22
SFSWAP-201ENST00000261674 RHOXF2Q9BQY4 288 aa16.43■□□□□ 0.22
SFSWAP-201ENST00000261674 FOXP1Q9H334 677 aaPredicted RBP16.43■□□□□ 0.22
SFSWAP-201ENST00000261674 SRPRBQ9Y5M8 271 aaKnown RBP16.43■□□□□ 0.22
SFSWAP-201ENST00000261674 N4BP3O15049 544 aa16.42■□□□□ 0.22
SFSWAP-201ENST00000261674 PLEKHA8P1O95397 391 aa16.42■□□□□ 0.22
SFSWAP-201ENST00000261674 ARID4AP29374 1257 aaPredicted RBP16.42■□□□□ 0.22
SFSWAP-201ENST00000261674 ST5P78524 1137 aa16.42■□□□□ 0.22
SFSWAP-201ENST00000261674 PPARAQ07869 468 aa16.42■□□□□ 0.22
SFSWAP-201ENST00000261674 FILIP1LQ4L180 1135 aa16.42■□□□□ 0.22
SFSWAP-201ENST00000261674 SLC27A3Q5K4L6 730 aa16.42■□□□□ 0.22
SFSWAP-201ENST00000261674 PRR5LQ6MZQ0 368 aa16.42■□□□□ 0.22
SFSWAP-201ENST00000261674 WNT7AO00755 349 aa16.42■□□□□ 0.22
SFSWAP-201ENST00000261674 KIF5CO60282 957 aa16.42■□□□□ 0.22
SFSWAP-201ENST00000261674 MAP3K9P80192 1104 aa16.42■□□□□ 0.22
SFSWAP-201ENST00000261674 SMC1AQ14683 1233 aaKnown RBP16.42■□□□□ 0.22
SFSWAP-201ENST00000261674 CLEC4GQ6UXB4 293 aa16.42■□□□□ 0.22
SFSWAP-201ENST00000261674 RAD9BQ6WBX8 426 aa16.42■□□□□ 0.22
SFSWAP-201ENST00000261674 ZNF622Q969S3 477 aaKnown RBP eCLIP16.42■□□□□ 0.223e-7■□□□□ 10.5
SFSWAP-201ENST00000261674 CTNND2Q9UQB3 1225 aa16.42■□□□□ 0.22
SFSWAP-201ENST00000261674 ACTN4O43707 911 aaKnown RBP16.41■□□□□ 0.22
SFSWAP-201ENST00000261674 ZNF18P17022 549 aa16.41■□□□□ 0.22
SFSWAP-201ENST00000261674 PLCD1P51178 756 aa16.41■□□□□ 0.22
SFSWAP-201ENST00000261674 CC2D1AQ6P1N0 951 aaPredicted RBP16.41■□□□□ 0.22
SFSWAP-201ENST00000261674 ANKRD18AQ8IVF6 992 aa16.41■□□□□ 0.22
SFSWAP-201ENST00000261674 ACRBPQ8NEB7 543 aa16.41■□□□□ 0.22
SFSWAP-201ENST00000261674 ANKIB1Q9P2G1 1089 aa16.41■□□□□ 0.22
SFSWAP-201ENST00000261674 SYNRGQ9UMZ2 1314 aa16.41■□□□□ 0.22
SFSWAP-201ENST00000261674 GOLGA6L9A6NEM1 432 aa16.41■□□□□ 0.22
SFSWAP-201ENST00000261674 CHRNDQ07001 517 aa16.41■□□□□ 0.22
SFSWAP-201ENST00000261674 TBX2Q13207 712 aaPredicted RBP16.41■□□□□ 0.22
SFSWAP-201ENST00000261674 RRAGBQ5VZM2 374 aa16.41■□□□□ 0.22
SFSWAP-201ENST00000261674 KANK3Q6NY19 840 aa16.41■□□□□ 0.22
SFSWAP-201ENST00000261674 TPM1P09493 284 aa16.41■□□□□ 0.22
SFSWAP-201ENST00000261674 MCM7P33993 719 aa16.41■□□□□ 0.22
SFSWAP-201ENST00000261674 DYNLL1P63167 89 aaKnown RBP16.41■□□□□ 0.22
SFSWAP-201ENST00000261674 NR1I3Q14994 352 aa16.41■□□□□ 0.22
SFSWAP-201ENST00000261674 IFIT1BQ5T764 474 aaKnown RBP16.41■□□□□ 0.22
SFSWAP-201ENST00000261674 ESR2Q92731 530 aa16.41■□□□□ 0.22
SFSWAP-201ENST00000261674 GOLGA1Q92805 767 aa16.41■□□□□ 0.22
SFSWAP-201ENST00000261674 CDC5LQ99459 802 aaKnown RBP16.41■□□□□ 0.22
SFSWAP-201ENST00000261674 PLIN2Q99541 437 aa16.41■□□□□ 0.22
SFSWAP-201ENST00000261674 NUP88Q99567 741 aaPredicted RBP16.41■□□□□ 0.22
SFSWAP-201ENST00000261674 FAM237AA0A1B0GTK4 181 aa16.4■□□□□ 0.22
SFSWAP-201ENST00000261674 ZRANB2O95218 330 aaKnown RBP eCLIP16.4■□□□□ 0.22
SFSWAP-201ENST00000261674 WWC2Q6AWC2 1192 aa16.4■□□□□ 0.22
SFSWAP-201ENST00000261674 FCHSD1Q86WN1 690 aa16.4■□□□□ 0.22
SFSWAP-201ENST00000261674 GPR161Q8N6U8 529 aaKnown RBP16.4■□□□□ 0.22
SFSWAP-201ENST00000261674 RNF41Q9H4P4 317 aaPredicted RBP16.4■□□□□ 0.22
SFSWAP-201ENST00000261674 MRFAP1Q9Y605 127 aa16.4■□□□□ 0.22
SFSWAP-201ENST00000261674 TBC1D8O95759 1140 aa16.4■□□□□ 0.22
SFSWAP-201ENST00000261674 ABL1P00519 1130 aa16.4■□□□□ 0.22
SFSWAP-201ENST00000261674 HNRNPH2P55795 449 aaKnown RBP16.4■□□□□ 0.22
SFSWAP-201ENST00000261674 CHMP4BP1P59074 171 aa16.4■□□□□ 0.22
SFSWAP-201ENST00000261674 ALX1Q15699 326 aa16.4■□□□□ 0.22
SFSWAP-201ENST00000261674 ADGRA1Q86SQ6 560 aa16.4■□□□□ 0.22
SFSWAP-201ENST00000261674 PAGE5Q96GU1 130 aa16.4■□□□□ 0.22
SFSWAP-201ENST00000261674 FAM53CQ9NYF3 392 aa16.4■□□□□ 0.22
SFSWAP-201ENST00000261674 KRT2P35908 639 aa16.4■□□□□ 0.22
SFSWAP-201ENST00000261674 PTGDRQ13258 359 aa16.4■□□□□ 0.22
SFSWAP-201ENST00000261674 CATIPQ7Z7H3 387 aa16.4■□□□□ 0.22
SFSWAP-201ENST00000261674 TMTC2Q8N394 836 aa16.4■□□□□ 0.22
SFSWAP-201ENST00000261674 TAB2Q9NYJ8 693 aa16.4■□□□□ 0.22
SFSWAP-201ENST00000261674 LAMB4A4D0S4 1761 aa16.39■□□□□ 0.22
SFSWAP-201ENST00000261674 PHACTR2O75167 634 aa16.39■□□□□ 0.21
SFSWAP-201ENST00000261674 CHRNA5P30532 468 aa16.39■□□□□ 0.21
SFSWAP-201ENST00000261674 SARSP49591 514 aaKnown RBP16.39■□□□□ 0.21
SFSWAP-201ENST00000261674 RPGRQ92834 1020 aaKnown RBP16.39■□□□□ 0.21
SFSWAP-201ENST00000261674 MROH5Q6ZUA9 1318 aa16.39■□□□□ 0.21
SFSWAP-201ENST00000261674 CDHR2Q9BYE9 1310 aa16.39■□□□□ 0.21
SFSWAP-201ENST00000261674 MAGEB6P1A0A0J9YX57 407 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms