RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 CYP26C1Q6V0L0 522 aa11.35□□□□□ -0.59
PALB2-201ENST00000261584 OTUD6BQ8N6M0 293 aa11.35□□□□□ -0.59
PALB2-201ENST00000261584 SLC39A2Q9NP94 309 aa11.35□□□□□ -0.59
PALB2-201ENST00000261584 BABAM1Q9NWV8 329 aa11.35□□□□□ -0.59
PALB2-201ENST00000261584 EHD2Q9NZN4 543 aa11.35□□□□□ -0.59
PALB2-201ENST00000261584 MED23Q9ULK4 1368 aa11.34□□□□□ -0.59
PALB2-201ENST00000261584 CUL4BQ13620 913 aa11.34□□□□□ -0.59
PALB2-201ENST00000261584 ANKRD18AQ8IVF6 992 aa11.34□□□□□ -0.59
PALB2-201ENST00000261584 REXO1L1PQ8IX06 675 aa11.34□□□□□ -0.59
PALB2-201ENST00000261584 ZNF444Q8N0Y2 327 aaPredicted RBP11.34□□□□□ -0.59
PALB2-201ENST00000261584 ZNF219Q9P2Y4 722 aaPredicted RBP11.34□□□□□ -0.59
PALB2-201ENST00000261584 FBXO3Q9UK99 471 aa11.34□□□□□ -0.59
PALB2-201ENST00000261584 PHLPP2Q6ZVD8 1323 aa11.34□□□□□ -0.59
PALB2-201ENST00000261584 NCAPHQ15003 741 aa11.34□□□□□ -0.59
PALB2-201ENST00000261584 SYCP1Q15431 976 aa11.34□□□□□ -0.59
PALB2-201ENST00000261584 CT47A1Q5JQC4 288 aaPredicted RBP11.34□□□□□ -0.59
PALB2-201ENST00000261584 NAA35Q5VZE5 725 aa11.34□□□□□ -0.59
PALB2-201ENST00000261584 RRAGAQ7L523 313 aa11.34□□□□□ -0.59
PALB2-201ENST00000261584 UBN2Q6ZU65 1347 aa11.34□□□□□ -0.59
PALB2-201ENST00000261584 SH2B2O14492 632 aaPredicted RBP11.34□□□□□ -0.59
PALB2-201ENST00000261584 PLCD1P51178 756 aa11.34□□□□□ -0.59
PALB2-201ENST00000261584 DTHD1Q6ZMT9 781 aa11.34□□□□□ -0.59
PALB2-201ENST00000261584 TC2NQ8N9U0 490 aa11.34□□□□□ -0.59
PALB2-201ENST00000261584 HPS5Q9UPZ3 1129 aa11.34□□□□□ -0.59
PALB2-201ENST00000261584 SOS2Q07890 1332 aaPredicted RBP11.34□□□□□ -0.59
PALB2-201ENST00000261584 A2ML1A8K2U0 1454 aa11.34□□□□□ -0.59
PALB2-201ENST00000261584 IKBKBO14920 756 aa11.33□□□□□ -0.6
PALB2-201ENST00000261584 NAPAP54920 295 aa11.33□□□□□ -0.6
PALB2-201ENST00000261584 PLS1Q14651 629 aa11.33□□□□□ -0.6
PALB2-201ENST00000261584 KRT31Q15323 416 aa11.33□□□□□ -0.6
PALB2-201ENST00000261584 MB21D2Q8IYB1 491 aaPredicted RBP11.33□□□□□ -0.6
PALB2-201ENST00000261584 TMEM87BQ96K49 555 aa11.33□□□□□ -0.6
PALB2-201ENST00000261584 FEZ2Q9UHY8 353 aaPredicted RBP11.33□□□□□ -0.6
PALB2-201ENST00000261584 ADGRB2O60241 1585 aa11.33□□□□□ -0.6
PALB2-201ENST00000261584 POTEB2H3BUK9 544 aa11.33□□□□□ -0.6
PALB2-201ENST00000261584 TNNI2P48788 182 aa11.33□□□□□ -0.6
PALB2-201ENST00000261584 PICALMQ13492 652 aa11.33□□□□□ -0.6
PALB2-201ENST00000261584 SPATA1Q5VX52 437 aa11.33□□□□□ -0.6
PALB2-201ENST00000261584 ADGRG1Q9Y653 693 aa11.33□□□□□ -0.6
PALB2-201ENST00000261584 CAPN7Q9Y6W3 813 aa11.33□□□□□ -0.6
PALB2-201ENST00000261584 NEXMIFQ5QGS0 1516 aa11.33□□□□□ -0.6
PALB2-201ENST00000261584 NCK2O43639 380 aa11.33□□□□□ -0.6
PALB2-201ENST00000261584 COPB1P53618 953 aaKnown RBP11.33□□□□□ -0.6
PALB2-201ENST00000261584 RAPGEF1Q13905 1077 aa11.33□□□□□ -0.6
PALB2-201ENST00000261584 GIMAP7Q8NHV1 300 aa11.33□□□□□ -0.6
PALB2-201ENST00000261584 TMEM110-MUSTN1A8MSY1 372 aa11.32□□□□□ -0.6
PALB2-201ENST00000261584 TACC1O75410 805 aa11.32□□□□□ -0.6
PALB2-201ENST00000261584 TCIRG1Q13488 830 aa11.32□□□□□ -0.6
PALB2-201ENST00000261584 TMTC1Q8IUR5 882 aa11.32□□□□□ -0.6
PALB2-201ENST00000261584 EHD4Q9H223 541 aa11.32□□□□□ -0.6
PALB2-201ENST00000261584 CNNM2Q9H8M5 875 aa11.32□□□□□ -0.6
PALB2-201ENST00000261584 TTF2Q9UNY4 1162 aaKnown RBP11.32□□□□□ -0.6
PALB2-201ENST00000261584 EIF4E1BA6NMX2 242 aaKnown RBP11.32□□□□□ -0.6
PALB2-201ENST00000261584 CCNT1O60563 726 aaKnown RBP11.32□□□□□ -0.6
PALB2-201ENST00000261584 TMC4Q7Z404 712 aa11.32□□□□□ -0.6
PALB2-201ENST00000261584 SH2D3CQ8N5H7 860 aa11.32□□□□□ -0.6
PALB2-201ENST00000261584 PAGE5Q96GU1 130 aa11.32□□□□□ -0.6
PALB2-201ENST00000261584 MRFAP1Q9Y605 127 aa11.32□□□□□ -0.6
PALB2-201ENST00000261584 DUSP10Q9Y6W6 482 aa11.32□□□□□ -0.6
PALB2-201ENST00000261584 SH3TC1Q8TE82 1336 aa11.32□□□□□ -0.6
PALB2-201ENST00000261584 BUB1BO60566 1050 aaPredicted RBP11.32□□□□□ -0.6
PALB2-201ENST00000261584 UQCRFS1P1P0C7P4 283 aa11.32□□□□□ -0.6
PALB2-201ENST00000261584 H2AFXP16104 143 aaPredicted RBP11.32□□□□□ -0.6
PALB2-201ENST00000261584 FOXO4P98177 505 aa11.32□□□□□ -0.6
PALB2-201ENST00000261584 PDCLQ13371 301 aa11.32□□□□□ -0.6
PALB2-201ENST00000261584 BRD3Q15059 726 aa11.32□□□□□ -0.6
PALB2-201ENST00000261584 CFAP58Q5T655 872 aa11.32□□□□□ -0.6
PALB2-201ENST00000261584 ZSCAN29Q8IWY8 852 aaPredicted RBP11.32□□□□□ -0.6
PALB2-201ENST00000261584 OR8K1Q8NGG5 319 aa11.32□□□□□ -0.6
PALB2-201ENST00000261584 GOLGA5Q8TBA6 731 aa11.32□□□□□ -0.6
PALB2-201ENST00000261584 ALS2CR12Q96Q35 445 aa11.32□□□□□ -0.6
PALB2-201ENST00000261584 CCDC151A5D8V7 595 aa11.32□□□□□ -0.6
PALB2-201ENST00000261584 MOCS3O95396 460 aa11.32□□□□□ -0.6
PALB2-201ENST00000261584 MMP1P03956 469 aa11.32□□□□□ -0.6
PALB2-201ENST00000261584 TSPY3P0CV98 308 aa11.32□□□□□ -0.6
PALB2-201ENST00000261584 TSPY8P0CW00 308 aa11.32□□□□□ -0.6
PALB2-201ENST00000261584 TECP42680 631 aa11.32□□□□□ -0.6
PALB2-201ENST00000261584 KLK7P49862 253 aa11.32□□□□□ -0.6
PALB2-201ENST00000261584 RASGRF1Q13972 1273 aa11.32□□□□□ -0.6
PALB2-201ENST00000261584 RESP18Q5W5W9 173 aa11.32□□□□□ -0.6
PALB2-201ENST00000261584 IQCEQ6IPM2 695 aa11.32□□□□□ -0.6
PALB2-201ENST00000261584 C8orf74Q6P047 294 aa11.32□□□□□ -0.6
PALB2-201ENST00000261584 LRWD1Q9UFC0 647 aa11.32□□□□□ -0.6
PALB2-201ENST00000261584 PACSIN2Q9UNF0 486 aaPredicted RBP11.32□□□□□ -0.6
PALB2-201ENST00000261584 MLH3Q9UHC1 1453 aa11.31□□□□□ -0.6
PALB2-201ENST00000261584 ATP1A1P05023 1023 aaKnown RBP11.31□□□□□ -0.6
PALB2-201ENST00000261584 INPP5BP32019 993 aa11.31□□□□□ -0.6
PALB2-201ENST00000261584 GGCXP38435 758 aa11.31□□□□□ -0.6
PALB2-201ENST00000261584 MAGEA1P43355 309 aa11.31□□□□□ -0.6
PALB2-201ENST00000261584 RFX5P48382 616 aaPredicted RBP11.31□□□□□ -0.6
PALB2-201ENST00000261584 USPL1Q5W0Q7 1092 aa11.31□□□□□ -0.6
PALB2-201ENST00000261584 UBLCP1Q8WVY7 318 aaPredicted RBP11.31□□□□□ -0.6
PALB2-201ENST00000261584 SPAG5Q96R06 1193 aa11.31□□□□□ -0.6
PALB2-201ENST00000261584 ZBTB1Q9Y2K1 713 aa11.31□□□□□ -0.6
PALB2-201ENST00000261584 EIF3CLB5ME19 914 aaKnown RBP11.31□□□□□ -0.6
PALB2-201ENST00000261584 TRAF5O00463 557 aa11.31□□□□□ -0.6
PALB2-201ENST00000261584 ERLIN2O94905 339 aa11.31□□□□□ -0.6
PALB2-201ENST00000261584 ADD2P35612 726 aa11.31□□□□□ -0.6
PALB2-201ENST00000261584 MKRN4PQ13434 485 aaPredicted RBP11.31□□□□□ -0.6
PALB2-201ENST00000261584 CCDC25Q86WR0 208 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms