RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 AKNAD1Q5T1N1 836 aa14.4□□□□□ -0.1
TMEM260-201ENST00000261556 SLC9C2Q5TAH2 1124 aa14.4□□□□□ -0.1
TMEM260-201ENST00000261556 TRMT1LQ7Z2T5 733 aaKnown RBP14.4□□□□□ -0.1
TMEM260-201ENST00000261556 HPCAL4Q9UM19 191 aa14.4□□□□□ -0.1
TMEM260-201ENST00000261556 RTCBQ9Y3I0 505 aaKnown RBP14.4□□□□□ -0.1
TMEM260-201ENST00000261556 CDHR2Q9BYE9 1310 aa14.4□□□□□ -0.1
TMEM260-201ENST00000261556 MAP3K5Q99683 1374 aa14.4□□□□□ -0.1
TMEM260-201ENST00000261556 CCDC194A0A1B0GVG4 234 aa14.4□□□□□ -0.1
TMEM260-201ENST00000261556 MAP2K7O14733 419 aa14.4□□□□□ -0.1
TMEM260-201ENST00000261556 CYP7A1P22680 504 aa14.4□□□□□ -0.1
TMEM260-201ENST00000261556 NDUFA8P51970 172 aa14.4□□□□□ -0.1
TMEM260-201ENST00000261556 NLRP5P59047 1200 aa14.4□□□□□ -0.1
TMEM260-201ENST00000261556 RCSD1Q6JBY9 416 aa14.4□□□□□ -0.1
TMEM260-201ENST00000261556 G2E3Q7L622 706 aa14.4□□□□□ -0.1
TMEM260-201ENST00000261556 KCNB2Q92953 911 aa14.4□□□□□ -0.1
TMEM260-201ENST00000261556 CEP131Q9UPN4 1083 aa14.4□□□□□ -0.1
TMEM260-201ENST00000261556 RPAP1Q9BWH6 1393 aaPredicted RBP14.39□□□□□ -0.11
TMEM260-201ENST00000261556 GCOM1H8Y6P7 765 aaPredicted RBP14.39□□□□□ -0.11
TMEM260-201ENST00000261556 KRT86O43790 486 aa14.39□□□□□ -0.11
TMEM260-201ENST00000261556 RPS6KA5O75582 802 aa14.39□□□□□ -0.11
TMEM260-201ENST00000261556 MYZAPP0CAP1 466 aa14.39□□□□□ -0.11
TMEM260-201ENST00000261556 FCHSD1Q86WN1 690 aa14.39□□□□□ -0.11
TMEM260-201ENST00000261556 DPF2Q92785 391 aa14.39□□□□□ -0.11
TMEM260-201ENST00000261556 SBNO1A3KN83 1393 aa14.39□□□□□ -0.11
TMEM260-201ENST00000261556 C21orf2O43822 256 aa14.39□□□□□ -0.11
TMEM260-201ENST00000261556 ATP6V1G1O75348 118 aa14.39□□□□□ -0.11
TMEM260-201ENST00000261556 ZNF827Q17R98 1081 aa14.39□□□□□ -0.11
TMEM260-201ENST00000261556 SPATA21Q7Z572 469 aa14.39□□□□□ -0.11
TMEM260-201ENST00000261556 SERPINA10Q9UK55 444 aa14.39□□□□□ -0.11
TMEM260-201ENST00000261556 SHANK2Q9UPX8 1470 aa14.39□□□□□ -0.11
TMEM260-201ENST00000261556 IRS4O14654 1257 aaPredicted RBP14.39□□□□□ -0.11
TMEM260-201ENST00000261556 PDE4BQ07343 736 aa14.39□□□□□ -0.11
TMEM260-201ENST00000261556 ZNF790Q6PG37 636 aa14.39□□□□□ -0.11
TMEM260-201ENST00000261556 Q6ZUG5 572 aa14.39□□□□□ -0.11
TMEM260-201ENST00000261556 KSR1Q8IVT5 923 aa14.39□□□□□ -0.11
TMEM260-201ENST00000261556 KLHL29Q96CT2 875 aa14.39□□□□□ -0.11
TMEM260-201ENST00000261556 IFT74Q96LB3 600 aa14.39□□□□□ -0.11
TMEM260-201ENST00000261556 NAA15Q9BXJ9 866 aaKnown RBP14.39□□□□□ -0.11
TMEM260-201ENST00000261556 LGR6Q9HBX8 967 aa14.39□□□□□ -0.11
TMEM260-201ENST00000261556 CD2APQ9Y5K6 639 aa14.39□□□□□ -0.11
TMEM260-201ENST00000261556 CFAP65Q6ZU64 1925 aaKnown RBP14.39□□□□□ -0.11
TMEM260-201ENST00000261556 ATP10AO60312 1499 aa14.39□□□□□ -0.11
TMEM260-201ENST00000261556 PFKFB2O60825 505 aa14.38□□□□□ -0.11
TMEM260-201ENST00000261556 ZFYP08048 801 aaPredicted RBP14.38□□□□□ -0.11
TMEM260-201ENST00000261556 PNOCQ13519 176 aa14.38□□□□□ -0.11
TMEM260-201ENST00000261556 ACCSLQ4AC99 568 aa14.38□□□□□ -0.11
TMEM260-201ENST00000261556 NAA35Q5VZE5 725 aa14.38□□□□□ -0.11
TMEM260-201ENST00000261556 CREB3L3Q68CJ9 461 aa14.38□□□□□ -0.11
TMEM260-201ENST00000261556 SPTY2D1Q68D10 685 aaPredicted RBP14.38□□□□□ -0.11
TMEM260-201ENST00000261556 NCOA7Q8NI08 942 aa14.38□□□□□ -0.11
TMEM260-201ENST00000261556 VCX3BQ9H321 246 aa14.38□□□□□ -0.11
TMEM260-201ENST00000261556 ANKZF1Q9H8Y5 726 aa14.38□□□□□ -0.11
TMEM260-201ENST00000261556 VCX3AQ9NNX9 186 aa14.38□□□□□ -0.11
TMEM260-201ENST00000261556 PAIP2BQ9ULR5 123 aaKnown RBP14.38□□□□□ -0.11
TMEM260-201ENST00000261556 USO1O60763 962 aaKnown RBP14.38□□□□□ -0.11
TMEM260-201ENST00000261556 JAKMIP2Q96AA8 810 aa14.38□□□□□ -0.11
TMEM260-201ENST00000261556 FAM89AQ96GI7 184 aa14.38□□□□□ -0.11
TMEM260-201ENST00000261556 FGD4Q96M96 766 aa14.38□□□□□ -0.11
TMEM260-201ENST00000261556 MMADHCQ9H3L0 296 aaPredicted RBP14.38□□□□□ -0.11
TMEM260-201ENST00000261556 VCPKMTQ9H867 229 aa14.38□□□□□ -0.11
TMEM260-201ENST00000261556 OPLAHO14841 1288 aa14.38□□□□□ -0.11
TMEM260-201ENST00000261556 OATP04181 439 aa14.38□□□□□ -0.11
TMEM260-201ENST00000261556 PARP1P09874 1014 aaKnown RBP14.38□□□□□ -0.11
TMEM260-201ENST00000261556 AFMP43652 599 aa14.38□□□□□ -0.11
TMEM260-201ENST00000261556 TAF4BQ92750 862 aa14.38□□□□□ -0.11
TMEM260-201ENST00000261556 NSRP1Q9H0G5 558 aaKnown RBP14.38□□□□□ -0.11
TMEM260-201ENST00000261556 VPS16Q9H269 839 aa14.38□□□□□ -0.11
TMEM260-201ENST00000261556 SLAIN2Q9P270 581 aa14.38□□□□□ -0.11
TMEM260-201ENST00000261556 HDAC6Q9UBN7 1215 aa14.38□□□□□ -0.11
TMEM260-201ENST00000261556 GGT7Q9UJ14 662 aa14.38□□□□□ -0.11
TMEM260-201ENST00000261556 ARHGEF12Q9NZN5 1544 aa14.38□□□□□ -0.11
TMEM260-201ENST00000261556 IL13P35225 146 aa14.38□□□□□ -0.11
TMEM260-201ENST00000261556 IGBP1P78318 339 aa14.38□□□□□ -0.11
TMEM260-201ENST00000261556 RSRC2Q7L4I2 434 aaKnown RBP14.38□□□□□ -0.11
TMEM260-201ENST00000261556 KCNG4Q8TDN1 519 aa14.38□□□□□ -0.11
TMEM260-201ENST00000261556 LBHD1Q9BQE6 289 aaPredicted RBP14.38□□□□□ -0.11
TMEM260-201ENST00000261556 IFNAR2P48551 515 aa14.37□□□□□ -0.11
TMEM260-201ENST00000261556 APBA1Q02410 837 aa14.37□□□□□ -0.11
TMEM260-201ENST00000261556 SSRP1Q08945 709 aaKnown RBP14.37□□□□□ -0.11
TMEM260-201ENST00000261556 CUL5Q93034 780 aa14.37□□□□□ -0.11
TMEM260-201ENST00000261556 ZC3H12CQ9C0D7 883 aaKnown RBP14.37□□□□□ -0.11
TMEM260-201ENST00000261556 UBAP1Q9NZ09 502 aa14.37□□□□□ -0.11
TMEM260-201ENST00000261556 TRPM2O94759 1503 aa14.37□□□□□ -0.11
TMEM260-201ENST00000261556 TRIM65Q6PJ69 517 aa14.37□□□□□ -0.11
TMEM260-201ENST00000261556 FAM81AQ8TBF8 368 aa14.37□□□□□ -0.11
TMEM260-201ENST00000261556 HNRNPLLQ8WVV9 542 aaKnown RBP14.37□□□□□ -0.11
TMEM260-201ENST00000261556 FERP16591 822 aa14.37□□□□□ -0.11
TMEM260-201ENST00000261556 LSP1P33241 339 aa14.37□□□□□ -0.11
TMEM260-201ENST00000261556 KRT9P35527 623 aa14.37□□□□□ -0.11
TMEM260-201ENST00000261556 ZMAT2Q96NC0 199 aaKnown RBP14.37□□□□□ -0.11
TMEM260-201ENST00000261556 MRPL44Q9H9J2 332 aaKnown RBP14.37□□□□□ -0.11
TMEM260-201ENST00000261556 KIF5AQ12840 1032 aa14.36□□□□□ -0.11
TMEM260-201ENST00000261556 KRT71Q3SY84 523 aa14.36□□□□□ -0.11
TMEM260-201ENST00000261556 ZC3H12AQ5D1E8 599 aaKnown RBP14.36□□□□□ -0.11
TMEM260-201ENST00000261556 CHST3Q7LGC8 479 aa14.36□□□□□ -0.11
TMEM260-201ENST00000261556 CNGA4Q8IV77 575 aa14.36□□□□□ -0.11
TMEM260-201ENST00000261556 VSTM4Q8IW00 320 aa14.36□□□□□ -0.11
TMEM260-201ENST00000261556 PAF1Q8N7H5 531 aa14.36□□□□□ -0.11
TMEM260-201ENST00000261556 CCDC197Q8NCU1 140 aa14.36□□□□□ -0.11
TMEM260-201ENST00000261556 PPFIBP2Q8ND30 876 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms