RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 CAGE1Q8TC20 777 aa17.96■□□□□ 0.47
LMNB1-201ENST00000261366 CEP131Q9UPN4 1083 aa17.96■□□□□ 0.47
LMNB1-201ENST00000261366 MYH8P13535 1937 aa17.96■□□□□ 0.46
LMNB1-201ENST00000261366 ZNF185O15231 689 aa17.95■□□□□ 0.46
LMNB1-201ENST00000261366 DEXIO95424 95 aa17.95■□□□□ 0.46
LMNB1-201ENST00000261366 TCIRG1Q13488 830 aa17.95■□□□□ 0.46
LMNB1-201ENST00000261366 CYP26C1Q6V0L0 522 aa17.95■□□□□ 0.46
LMNB1-201ENST00000261366 TMTC1Q8IUR5 882 aa17.95■□□□□ 0.46
LMNB1-201ENST00000261366 TTLL11Q8NHH1 800 aa17.95■□□□□ 0.46
LMNB1-201ENST00000261366 AFAP1L1Q8TED9 768 aa17.95■□□□□ 0.46
LMNB1-201ENST00000261366 CTAGE1Q96RT6 745 aa17.95■□□□□ 0.46
LMNB1-201ENST00000261366 GBP3Q9H0R5 595 aa17.95■□□□□ 0.46
LMNB1-201ENST00000261366 EHD4Q9H223 541 aa17.95■□□□□ 0.46
LMNB1-201ENST00000261366 LMTK3Q96Q04 1460 aa17.95■□□□□ 0.46
LMNB1-201ENST00000261366 TRIM49BA6NDI0 452 aa17.95■□□□□ 0.46
LMNB1-201ENST00000261366 LIFRP42702 1097 aa17.95■□□□□ 0.46
LMNB1-201ENST00000261366 GDAQ9Y2T3 454 aa17.95■□□□□ 0.46
LMNB1-201ENST00000261366 SLC4A4Q9Y6R1 1079 aa17.95■□□□□ 0.46
LMNB1-201ENST00000261366 SART3Q15020 963 aaKnown RBP17.94■□□□□ 0.46
LMNB1-201ENST00000261366 CTR9Q6PD62 1173 aa17.94■□□□□ 0.46
LMNB1-201ENST00000261366 ZNF654Q8IZM8 581 aa17.94■□□□□ 0.46
LMNB1-201ENST00000261366 IQUBQ8NA54 791 aa17.94■□□□□ 0.46
LMNB1-201ENST00000261366 FANCBQ8NB91 859 aa17.94■□□□□ 0.46
LMNB1-201ENST00000261366 SPATA20Q8TB22 786 aa17.94■□□□□ 0.46
LMNB1-201ENST00000261366 SMARCC1Q92922 1105 aaPredicted RBP17.94■□□□□ 0.46
LMNB1-201ENST00000261366 POLD4Q9HCU8 107 aa17.94■□□□□ 0.46
LMNB1-201ENST00000261366 RIPOR2Q9Y4F9 1068 aa17.94■□□□□ 0.46
LMNB1-201ENST00000261366 SYF2O95926 243 aaKnown RBP17.94■□□□□ 0.46
LMNB1-201ENST00000261366 MYBL2P10244 700 aa17.94■□□□□ 0.46
LMNB1-201ENST00000261366 COPB1P53618 953 aaKnown RBP17.94■□□□□ 0.46
LMNB1-201ENST00000261366 CCDC122Q5T0U0 273 aa17.94■□□□□ 0.46
LMNB1-201ENST00000261366 LCORLQ8N3X6 602 aa17.94■□□□□ 0.46
LMNB1-201ENST00000261366 PLIN2Q99541 437 aa17.94■□□□□ 0.46
LMNB1-201ENST00000261366 UBAC1Q9BSL1 405 aa17.94■□□□□ 0.46
LMNB1-201ENST00000261366 ACBD3Q9H3P7 528 aa17.94■□□□□ 0.46
LMNB1-201ENST00000261366 REXO2Q9Y3B8 237 aaKnown RBP17.94■□□□□ 0.46
LMNB1-201ENST00000261366 V9GY48 417 aaPredicted RBP17.94■□□□□ 0.46
LMNB1-201ENST00000261366 GGCXP38435 758 aa17.93■□□□□ 0.46
LMNB1-201ENST00000261366 UBE3CQ15386 1083 aa17.93■□□□□ 0.46
LMNB1-201ENST00000261366 E2F4Q16254 413 aa17.93■□□□□ 0.46
LMNB1-201ENST00000261366 GNL3LQ9NVN8 582 aaKnown RBP17.93■□□□□ 0.46
LMNB1-201ENST00000261366 EPN1Q9Y6I3 576 aaPredicted RBP17.93■□□□□ 0.46
LMNB1-201ENST00000261366 KCNJ18B7U540 433 aa17.93■□□□□ 0.46
LMNB1-201ENST00000261366 PATL2C9JE40 543 aaKnown RBP17.93■□□□□ 0.46
LMNB1-201ENST00000261366 MATR3P43243 847 aaKnown RBP eCLIP17.93■□□□□ 0.46
LMNB1-201ENST00000261366 PPARDQ03181 441 aa17.93■□□□□ 0.46
LMNB1-201ENST00000261366 KCNJ12Q14500 433 aa17.93■□□□□ 0.46
LMNB1-201ENST00000261366 TTF1Q15361 905 aaPredicted RBP17.93■□□□□ 0.46
LMNB1-201ENST00000261366 MICALL1Q8N3F8 863 aa17.93■□□□□ 0.46
LMNB1-201ENST00000261366 NELFBQ8WX92 580 aa17.93■□□□□ 0.46
LMNB1-201ENST00000261366 PSMB7Q99436 277 aa17.93■□□□□ 0.46
LMNB1-201ENST00000261366 CARD10Q9BWT7 1032 aa17.93■□□□□ 0.46
LMNB1-201ENST00000261366 MACROD2A1Z1Q3 448 aa17.93■□□□□ 0.46
LMNB1-201ENST00000261366 NDUFA10O95299 355 aa17.93■□□□□ 0.46
LMNB1-201ENST00000261366 MAGEA9P43362 315 aa17.93■□□□□ 0.46
LMNB1-201ENST00000261366 HLFQ16534 295 aa17.93■□□□□ 0.46
LMNB1-201ENST00000261366 ZNF579Q8NAF0 562 aaKnown RBP17.93■□□□□ 0.46
LMNB1-201ENST00000261366 SDR42E1Q8WUS8 393 aa17.93■□□□□ 0.46
LMNB1-201ENST00000261366 DUSP10Q9Y6W6 482 aa17.93■□□□□ 0.46
LMNB1-201ENST00000261366 STK36Q9NRP7 1315 aa17.92■□□□□ 0.46
LMNB1-201ENST00000261366 TTC26A0AVF1 554 aa17.92■□□□□ 0.46
LMNB1-201ENST00000261366 GSG1L2A8MUP6 293 aa17.92■□□□□ 0.46
LMNB1-201ENST00000261366 ERVV-2B6SEH9 535 aa17.92■□□□□ 0.46
LMNB1-201ENST00000261366 AMPD2Q01433 879 aa17.92■□□□□ 0.46
LMNB1-201ENST00000261366 PTGDRQ13258 359 aa17.92■□□□□ 0.46
LMNB1-201ENST00000261366 KIAA1328Q86T90 577 aa17.92■□□□□ 0.46
LMNB1-201ENST00000261366 CRACR2AQ9BSW2 395 aa17.92■□□□□ 0.46
LMNB1-201ENST00000261366 ISCA1Q9BUE6 129 aa17.92■□□□□ 0.46
LMNB1-201ENST00000261366 EFCC1Q9HA90 598 aa17.92■□□□□ 0.46
LMNB1-201ENST00000261366 COL5A2P05997 1499 aaPredicted RBP17.92■□□□□ 0.46
LMNB1-201ENST00000261366 TCRBV5S4A2TA0A5A2 114 aa17.92■□□□□ 0.46
LMNB1-201ENST00000261366 PLEKHA8P1O95397 391 aa17.92■□□□□ 0.46
LMNB1-201ENST00000261366 MCM7P33993 719 aa17.92■□□□□ 0.46
LMNB1-201ENST00000261366 STIM1Q13586 685 aa17.92■□□□□ 0.46
LMNB1-201ENST00000261366 TICAM2Q86XR7 235 aa17.92■□□□□ 0.46
LMNB1-201ENST00000261366 JRKLQ9Y4A0 524 aa17.92■□□□□ 0.46
LMNB1-201ENST00000261366 XDHP47989 1333 aa17.91■□□□□ 0.46
LMNB1-201ENST00000261366 ANKRD18BA2A2Z9 1011 aa17.91■□□□□ 0.46
LMNB1-201ENST00000261366 IRX3P78415 501 aaPredicted RBP17.91■□□□□ 0.46
LMNB1-201ENST00000261366 C2orf54Q08AI8 447 aa17.91■□□□□ 0.46
LMNB1-201ENST00000261366 JADE2Q9NQC1 790 aa17.91■□□□□ 0.46
LMNB1-201ENST00000261366 AATFQ9NY61 560 aaKnown RBP eCLIP17.91■□□□□ 0.46
LMNB1-201ENST00000261366 HPCAL4Q9UM19 191 aa17.91■□□□□ 0.46
LMNB1-201ENST00000261366 RIC1Q4ADV7 1423 aa17.91■□□□□ 0.46
LMNB1-201ENST00000261366 CYP2D7A0A087X1C5 515 aa17.91■□□□□ 0.46
LMNB1-201ENST00000261366 CCT5P48643 541 aa17.91■□□□□ 0.46
LMNB1-201ENST00000261366 LIG3P49916 1009 aa17.91■□□□□ 0.46
LMNB1-201ENST00000261366 USP14P54578 494 aa17.91■□□□□ 0.46
LMNB1-201ENST00000261366 CYP27A1Q02318 531 aa17.91■□□□□ 0.46
LMNB1-201ENST00000261366 RASSF8Q8NHQ8 419 aa17.91■□□□□ 0.46
LMNB1-201ENST00000261366 KRT23Q9C075 422 aa17.91■□□□□ 0.46
LMNB1-201ENST00000261366 SAR1BQ9Y6B6 198 aa17.91■□□□□ 0.46
LMNB1-201ENST00000261366 MYO5AQ9Y4I1 1855 aaKnown RBP17.9■□□□□ 0.46
LMNB1-201ENST00000261366 PPARAQ07869 468 aa17.9■□□□□ 0.46
LMNB1-201ENST00000261366 PAK1Q13153 545 aa17.9■□□□□ 0.46
LMNB1-201ENST00000261366 TCP11X2Q5H9J9 407 aa17.9■□□□□ 0.46
LMNB1-201ENST00000261366 ICE2Q659A1 982 aa17.9■□□□□ 0.46
LMNB1-201ENST00000261366 ELOA2Q8IYF1 753 aaPredicted RBP17.9■□□□□ 0.46
LMNB1-201ENST00000261366 ANKRD20A12PQ8NF67 263 aa17.9■□□□□ 0.46
LMNB1-201ENST00000261366 GSDMAQ96QA5 445 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms