RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 ZBTB43O43298 467 aa18.24■□□□□ 0.51
GYPC-201ENST00000259254 LARGE1O95461 756 aa18.24■□□□□ 0.51
GYPC-201ENST00000259254 EEF2P13639 858 aaKnown RBP18.24■□□□□ 0.51
GYPC-201ENST00000259254 GUCY1A2P33402 732 aa18.24■□□□□ 0.51
GYPC-201ENST00000259254 SLC4A3P48751 1232 aa18.24■□□□□ 0.51
GYPC-201ENST00000259254 LBX1P52954 281 aa18.24■□□□□ 0.51
GYPC-201ENST00000259254 FKBP1BP68106 108 aa18.24■□□□□ 0.51
GYPC-201ENST00000259254 ME3Q16798 604 aa18.24■□□□□ 0.51
GYPC-201ENST00000259254 APOA5Q6Q788 366 aa18.24■□□□□ 0.51
GYPC-201ENST00000259254 ARMC9Q7Z3E5 817 aa18.24■□□□□ 0.51
GYPC-201ENST00000259254 SCYL3Q8IZE3 742 aa18.24■□□□□ 0.51
GYPC-201ENST00000259254 LRRC47Q8N1G4 583 aaKnown RBP18.24■□□□□ 0.51
GYPC-201ENST00000259254 NECAB1Q8N987 351 aa18.24■□□□□ 0.51
GYPC-201ENST00000259254 PNMA1Q8ND90 353 aa18.24■□□□□ 0.51
GYPC-201ENST00000259254 ANKS1AQ92625 1134 aa18.24■□□□□ 0.51
GYPC-201ENST00000259254 ZKSCAN4Q969J2 545 aaPredicted RBP18.24■□□□□ 0.51
GYPC-201ENST00000259254 ZNF274Q96GC6 653 aaPredicted RBP18.24■□□□□ 0.51
GYPC-201ENST00000259254 BEGAINQ9BUH8 593 aa18.24■□□□□ 0.51
GYPC-201ENST00000259254 ARHGEF10LQ9HCE6 1279 aa18.24■□□□□ 0.51
GYPC-201ENST00000259254 GINM1Q9NU53 330 aa18.24■□□□□ 0.51
GYPC-201ENST00000259254 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.24■□□□□ 0.51
GYPC-201ENST00000259254 GOLGA8AA7E2F4 631 aa18.23■□□□□ 0.51
GYPC-201ENST00000259254 FAM155AB1AL88 458 aaPredicted RBP18.23■□□□□ 0.51
GYPC-201ENST00000259254 RAD21O60216 631 aa18.23■□□□□ 0.51
GYPC-201ENST00000259254 RXRAP19793 462 aa18.23■□□□□ 0.51
GYPC-201ENST00000259254 PDIA3P30101 505 aaKnown RBP18.23■□□□□ 0.51
GYPC-201ENST00000259254 MAP3K9P80192 1104 aa18.23■□□□□ 0.51
GYPC-201ENST00000259254 CCDC83Q8IWF9 413 aa18.23■□□□□ 0.51
GYPC-201ENST00000259254 CCDC144CPQ8IYA2 1237 aa18.23■□□□□ 0.51
GYPC-201ENST00000259254 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.23■□□□□ 0.51
GYPC-201ENST00000259254 CHMP4CQ96CF2 233 aa18.23■□□□□ 0.51
GYPC-201ENST00000259254 NYAP2Q9P242 653 aa18.23■□□□□ 0.51
GYPC-201ENST00000259254 CSADQ9Y600 493 aa18.23■□□□□ 0.51
GYPC-201ENST00000259254 DDAH1O94760 285 aa18.22■□□□□ 0.51
GYPC-201ENST00000259254 CALM1P0DP23 149 aa18.22■□□□□ 0.51
GYPC-201ENST00000259254 CALM2P0DP24 149 aa18.22■□□□□ 0.51
GYPC-201ENST00000259254 CALM3P0DP25 149 aa18.22■□□□□ 0.51
GYPC-201ENST00000259254 METAP2P50579 478 aaKnown RBP eCLIP18.22■□□□□ 0.513e-7■■□□□ 14.3
GYPC-201ENST00000259254 ZNF157P51786 506 aaPredicted RBP18.22■□□□□ 0.51
GYPC-201ENST00000259254 EVCP57679 992 aa18.22■□□□□ 0.51
GYPC-201ENST00000259254 CCT2P78371 535 aaKnown RBP18.22■□□□□ 0.51
GYPC-201ENST00000259254 MOB2Q70IA6 237 aa18.22■□□□□ 0.51
GYPC-201ENST00000259254 CCDC84Q86UT8 332 aaPredicted RBP18.22■□□□□ 0.51
GYPC-201ENST00000259254 SPRYD3Q8NCJ5 442 aa18.22■□□□□ 0.51
GYPC-201ENST00000259254 CCDC102AQ96A19 550 aa18.22■□□□□ 0.51
GYPC-201ENST00000259254 IPO9Q96P70 1041 aaKnown RBP18.22■□□□□ 0.51
GYPC-201ENST00000259254 USP17L5A8MUK1 530 aa18.21■□□□□ 0.51
GYPC-201ENST00000259254 PFKFB2O60825 505 aa18.21■□□□□ 0.51
GYPC-201ENST00000259254 NOVP48745 357 aa18.21■□□□□ 0.51
GYPC-201ENST00000259254 ZIC5Q96T25 663 aa18.21■□□□□ 0.51
GYPC-201ENST00000259254 FEZ1Q99689 392 aa18.21■□□□□ 0.51
GYPC-201ENST00000259254 SH2D4AQ9H788 454 aa18.21■□□□□ 0.51
GYPC-201ENST00000259254 FOXD4L1Q9NU39 408 aa18.21■□□□□ 0.51
GYPC-201ENST00000259254 ISY1Q9ULR0 285 aaKnown RBP18.21■□□□□ 0.51
GYPC-201ENST00000259254 UBE2Q2LH0YL09 131 aa18.2■□□□□ 0.5
GYPC-201ENST00000259254 CA12O43570 354 aa18.2■□□□□ 0.5
GYPC-201ENST00000259254 SLC10A3P09131 477 aa18.2■□□□□ 0.5
GYPC-201ENST00000259254 VGLL4Q14135 290 aa18.2■□□□□ 0.5
GYPC-201ENST00000259254 RTN1Q16799 776 aa18.2■□□□□ 0.5
GYPC-201ENST00000259254 NOL9Q5SY16 702 aaKnown RBP18.2■□□□□ 0.5
GYPC-201ENST00000259254 ANKRD13AQ8IZ07 590 aa18.2■□□□□ 0.5
GYPC-201ENST00000259254 CTCFLQ8NI51 663 aaPredicted RBP18.2■□□□□ 0.5
GYPC-201ENST00000259254 GTF3C6Q969F1 213 aa18.2■□□□□ 0.5
GYPC-201ENST00000259254 AS3MTQ9HBK9 375 aa18.2■□□□□ 0.5
GYPC-201ENST00000259254 NCOA5Q9HCD5 579 aaKnown RBP18.2■□□□□ 0.5
GYPC-201ENST00000259254 HPS5Q9UPZ3 1129 aa18.2■□□□□ 0.5
GYPC-201ENST00000259254 CPLX1O14810 134 aa18.19■□□□□ 0.5
GYPC-201ENST00000259254 DHX16O60231 1041 aaKnown RBP18.19■□□□□ 0.5
GYPC-201ENST00000259254 RCAN1P53805 252 aa18.19■□□□□ 0.5
GYPC-201ENST00000259254 SCRN1Q12765 414 aa18.19■□□□□ 0.5
GYPC-201ENST00000259254 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.19■□□□□ 0.5
GYPC-201ENST00000259254 SIAH1Q8IUQ4 282 aa18.19■□□□□ 0.5
GYPC-201ENST00000259254 ACER1Q8TDN7 264 aa18.19■□□□□ 0.5
GYPC-201ENST00000259254 ELP3Q9H9T3 547 aa18.19■□□□□ 0.5
GYPC-201ENST00000259254 SNCAIPQ9Y6H5 919 aa18.19■□□□□ 0.5
GYPC-201ENST00000259254 PTPRAP18433 802 aa18.18■□□□□ 0.5
GYPC-201ENST00000259254 KIF5BP33176 963 aa18.18■□□□□ 0.5
GYPC-201ENST00000259254 TROAPQ12815 778 aa18.18■□□□□ 0.5
GYPC-201ENST00000259254 ZYXQ15942 572 aaKnown RBP18.18■□□□□ 0.5
GYPC-201ENST00000259254 MAP3K11Q16584 847 aa18.18■□□□□ 0.5
GYPC-201ENST00000259254 CCDC96Q2M329 555 aa18.18■□□□□ 0.5
GYPC-201ENST00000259254 CPLX2Q6PUV4 134 aaKnown RBP18.18■□□□□ 0.5
GYPC-201ENST00000259254 RASAL3Q86YV0 1011 aa18.18■□□□□ 0.5
GYPC-201ENST00000259254 FANCBQ8NB91 859 aa18.18■□□□□ 0.5
GYPC-201ENST00000259254 MKL1Q969V6 931 aa18.18■□□□□ 0.5
GYPC-201ENST00000259254 ZHX2Q9Y6X8 837 aa18.18■□□□□ 0.5
GYPC-201ENST00000259254 CCDC196A0A1B0GTZ2 297 aa18.17■□□□□ 0.5
GYPC-201ENST00000259254 A0A1W2PRG0 241 aa18.17■□□□□ 0.5
GYPC-201ENST00000259254 KIF23Q02241 960 aaPredicted RBP18.17■□□□□ 0.5
GYPC-201ENST00000259254 CUL4AQ13619 759 aa18.17■□□□□ 0.5
GYPC-201ENST00000259254 GRM4Q14833 912 aa18.17■□□□□ 0.5
GYPC-201ENST00000259254 SLFN13Q68D06 897 aa18.17■□□□□ 0.5
GYPC-201ENST00000259254 CLMNQ96JQ2 1002 aa18.17■□□□□ 0.5
GYPC-201ENST00000259254 GOPCQ9HD26 462 aa18.17■□□□□ 0.5
GYPC-201ENST00000259254 RBM28Q9NW13 759 aaKnown RBP18.17■□□□□ 0.5
GYPC-201ENST00000259254 TSKSQ9UJT2 592 aa18.17■□□□□ 0.5
GYPC-201ENST00000259254 TMX2Q9Y320 296 aa18.17■□□□□ 0.5
GYPC-201ENST00000259254 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.17■□□□□ 0.5
GYPC-201ENST00000259254 F5H6K3 240 aa18.16■□□□□ 0.5
GYPC-201ENST00000259254 PARP1P09874 1014 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms