RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 LDHCP07864 332 aa16.73■□□□□ 0.27
TRAFD1-201ENST00000257604 GOLGA8FQ08AF8 430 aa16.73■□□□□ 0.27
TRAFD1-201ENST00000257604 GOLGA8DPQ0D2H9 430 aa16.73■□□□□ 0.27
TRAFD1-201ENST00000257604 C12orf60Q5U649 245 aa16.73■□□□□ 0.27
TRAFD1-201ENST00000257604 EYA3Q99504 573 aa16.73■□□□□ 0.27
TRAFD1-201ENST00000257604 MAP3K14Q99558 947 aa16.73■□□□□ 0.27
TRAFD1-201ENST00000257604 PARP3Q9Y6F1 533 aa16.73■□□□□ 0.27
TRAFD1-201ENST00000257604 CTIFO43310 598 aaKnown RBP16.73■□□□□ 0.27
TRAFD1-201ENST00000257604 PRR29P0C7W0 189 aa16.72■□□□□ 0.27
TRAFD1-201ENST00000257604 IQCB1Q15051 598 aa16.72■□□□□ 0.27
TRAFD1-201ENST00000257604 SMYD4Q8IYR2 804 aaPredicted RBP16.72■□□□□ 0.27
TRAFD1-201ENST00000257604 SERPINC1P01008 464 aa16.72■□□□□ 0.27
TRAFD1-201ENST00000257604 ATP2B4P23634 1241 aa16.72■□□□□ 0.27
TRAFD1-201ENST00000257604 GSTO1P78417 241 aa16.72■□□□□ 0.27
TRAFD1-201ENST00000257604 TMTC3Q6ZXV5 915 aa16.72■□□□□ 0.27
TRAFD1-201ENST00000257604 CCDC112Q8NEF3 446 aa16.72■□□□□ 0.27
TRAFD1-201ENST00000257604 MAPK8IP1Q9UQF2 711 aa16.72■□□□□ 0.27
TRAFD1-201ENST00000257604 CICQ96RK0 1608 aaPredicted RBP16.72■□□□□ 0.27
TRAFD1-201ENST00000257604 A0A1W2PQ27 194 aa16.71■□□□□ 0.27
TRAFD1-201ENST00000257604 A0A1W2PQ64 194 aa16.71■□□□□ 0.27
TRAFD1-201ENST00000257604 A0A1W2PQD8 194 aa16.71■□□□□ 0.27
TRAFD1-201ENST00000257604 CDK11BP21127 795 aaKnown RBP16.71■□□□□ 0.27
TRAFD1-201ENST00000257604 RILPL1Q5EBL4 403 aa16.71■□□□□ 0.27
TRAFD1-201ENST00000257604 DHX40Q8IX18 779 aaKnown RBP16.71■□□□□ 0.27
TRAFD1-201ENST00000257604 BLZF1Q9H2G9 400 aa16.71■□□□□ 0.27
TRAFD1-201ENST00000257604 GPCPD1Q9NPB8 672 aa16.71■□□□□ 0.27
TRAFD1-201ENST00000257604 CDK8P49336 464 aa16.71■□□□□ 0.27
TRAFD1-201ENST00000257604 TMC6Q7Z403 805 aa16.71■□□□□ 0.27
TRAFD1-201ENST00000257604 RNF26Q9BY78 433 aaPredicted RBP16.71■□□□□ 0.27
TRAFD1-201ENST00000257604 PDGFDQ9GZP0 370 aaPredicted RBP16.71■□□□□ 0.27
TRAFD1-201ENST00000257604 ANAPC4Q9UJX5 808 aa16.71■□□□□ 0.27
TRAFD1-201ENST00000257604 SCAF8Q9UPN6 1271 aaKnown RBP16.71■□□□□ 0.27
TRAFD1-201ENST00000257604 BBOX1O75936 387 aa16.71■□□□□ 0.26
TRAFD1-201ENST00000257604 PTGDRQ13258 359 aa16.71■□□□□ 0.26
TRAFD1-201ENST00000257604 GTPBP4Q9BZE4 634 aaKnown RBP16.71■□□□□ 0.26
TRAFD1-201ENST00000257604 EN1Q05925 392 aaPredicted RBP16.7■□□□□ 0.26
TRAFD1-201ENST00000257604 RCSD1Q6JBY9 416 aa16.7■□□□□ 0.26
TRAFD1-201ENST00000257604 USP40Q9NVE5 1235 aa16.7■□□□□ 0.26
TRAFD1-201ENST00000257604 SCG2P13521 617 aa16.7■□□□□ 0.26
TRAFD1-201ENST00000257604 CFAP100Q494V2 611 aa16.7■□□□□ 0.26
TRAFD1-201ENST00000257604 FOXP4Q8IVH2 680 aaPredicted RBP16.7■□□□□ 0.26
TRAFD1-201ENST00000257604 EEF2KMTQ96G04 330 aa16.7■□□□□ 0.26
TRAFD1-201ENST00000257604 TMEM47Q9BQJ4 181 aa16.7■□□□□ 0.26
TRAFD1-201ENST00000257604 TMX1Q9H3N1 280 aa16.7■□□□□ 0.26
TRAFD1-201ENST00000257604 WNK3Q9BYP7 1800 aa16.7■□□□□ 0.26
TRAFD1-201ENST00000257604 METTL16Q86W50 562 aaKnown RBP16.69■□□□□ 0.26
TRAFD1-201ENST00000257604 RTFDC1Q9BY42 306 aaPredicted RBP16.69■□□□□ 0.26
TRAFD1-201ENST00000257604 XPO4Q9C0E2 1151 aaKnown RBP16.69■□□□□ 0.26
TRAFD1-201ENST00000257604 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.69■□□□□ 0.26
TRAFD1-201ENST00000257604 ADRA2BP18089 450 aa16.69■□□□□ 0.26
TRAFD1-201ENST00000257604 KIF5BP33176 963 aa16.69■□□□□ 0.26
TRAFD1-201ENST00000257604 INF2Q27J81 1249 aa16.69■□□□□ 0.26
TRAFD1-201ENST00000257604 RBM43Q6ZSC3 357 aaKnown RBP16.69■□□□□ 0.26
TRAFD1-201ENST00000257604 PLA2G4DQ86XP0 818 aa16.69■□□□□ 0.26
TRAFD1-201ENST00000257604 CEP95Q96GE4 821 aa16.69■□□□□ 0.26
TRAFD1-201ENST00000257604 KLRF2D3W0D1 207 aa16.69■□□□□ 0.26
TRAFD1-201ENST00000257604 CUTAO60888 179 aa16.69■□□□□ 0.26
TRAFD1-201ENST00000257604 TTC38Q5R3I4 469 aa16.69■□□□□ 0.26
TRAFD1-201ENST00000257604 KRBA2Q6ZNG9 492 aa16.69■□□□□ 0.26
TRAFD1-201ENST00000257604 FOXP1Q9H334 677 aaPredicted RBP16.69■□□□□ 0.26
TRAFD1-201ENST00000257604 SMTNL1A8MU46 457 aa16.68■□□□□ 0.26
TRAFD1-201ENST00000257604 SHROOM1Q2M3G4 852 aaPredicted RBP16.68■□□□□ 0.26
TRAFD1-201ENST00000257604 CEP135Q66GS9 1140 aa16.68■□□□□ 0.26
TRAFD1-201ENST00000257604 SYMPKQ92797 1274 aaKnown RBP16.68■□□□□ 0.26
TRAFD1-201ENST00000257604 ZNF215Q9UL58 517 aaPredicted RBP16.68■□□□□ 0.26
TRAFD1-201ENST00000257604 FLT1P17948 1338 aa16.68■□□□□ 0.26
TRAFD1-201ENST00000257604 CCDC194A0A1B0GVG4 234 aa16.68■□□□□ 0.26
TRAFD1-201ENST00000257604 SLC27A3Q5K4L6 730 aa16.68■□□□□ 0.26
TRAFD1-201ENST00000257604 C2CD5Q86YS7 1000 aa16.68■□□□□ 0.26
TRAFD1-201ENST00000257604 RBM28Q9NW13 759 aaKnown RBP16.68■□□□□ 0.26
TRAFD1-201ENST00000257604 DAGLAQ9Y4D2 1042 aa16.68■□□□□ 0.26
TRAFD1-201ENST00000257604 CNTNAP5Q8WYK1 1306 aa16.67■□□□□ 0.26
TRAFD1-201ENST00000257604 PP2D1A8MPX8 630 aa16.67■□□□□ 0.26
TRAFD1-201ENST00000257604 PRPF3O43395 683 aaKnown RBP16.67■□□□□ 0.26
TRAFD1-201ENST00000257604 CALM1P0DP23 149 aa16.67■□□□□ 0.26
TRAFD1-201ENST00000257604 CALM2P0DP24 149 aa16.67■□□□□ 0.26
TRAFD1-201ENST00000257604 CALM3P0DP25 149 aa16.67■□□□□ 0.26
TRAFD1-201ENST00000257604 RASA1P20936 1047 aa16.67■□□□□ 0.26
TRAFD1-201ENST00000257604 SLC16A2P36021 539 aa16.67■□□□□ 0.26
TRAFD1-201ENST00000257604 JAKMIP3Q5VZ66 844 aa16.67■□□□□ 0.26
TRAFD1-201ENST00000257604 RESP18Q5W5W9 173 aa16.67■□□□□ 0.26
TRAFD1-201ENST00000257604 TYW1BQ6NUM6 668 aa16.67■□□□□ 0.26
TRAFD1-201ENST00000257604 CERS5Q8N5B7 392 aa16.67■□□□□ 0.26
TRAFD1-201ENST00000257604 NAPAP54920 295 aa16.67■□□□□ 0.26
TRAFD1-201ENST00000257604 NFIAQ12857 509 aa16.67■□□□□ 0.26
TRAFD1-201ENST00000257604 NLGN1Q8N2Q7 840 aa16.67■□□□□ 0.26
TRAFD1-201ENST00000257604 FANCLQ9NW38 375 aa16.67■□□□□ 0.26
TRAFD1-201ENST00000257604 FBXO2Q9UK22 296 aaPredicted RBP16.67■□□□□ 0.26
TRAFD1-201ENST00000257604 PES1O00541 588 aaKnown RBP16.67■□□□□ 0.26
TRAFD1-201ENST00000257604 PPP6R2O75170 966 aa16.67■□□□□ 0.26
TRAFD1-201ENST00000257604 ELF2Q15723 593 aa16.67■□□□□ 0.26
TRAFD1-201ENST00000257604 STK36Q9NRP7 1315 aa16.66■□□□□ 0.26
TRAFD1-201ENST00000257604 USP17L5A8MUK1 530 aa16.66■□□□□ 0.26
TRAFD1-201ENST00000257604 ORC4O43929 436 aa16.66■□□□□ 0.26
TRAFD1-201ENST00000257604 ONECUT3O60422 494 aaPredicted RBP16.66■□□□□ 0.26
TRAFD1-201ENST00000257604 NLRP12P59046 1061 aa16.66■□□□□ 0.26
TRAFD1-201ENST00000257604 TPM4P67936 248 aa16.66■□□□□ 0.26
TRAFD1-201ENST00000257604 FUT2Q10981 343 aa16.66■□□□□ 0.26
TRAFD1-201ENST00000257604 CCDC96Q2M329 555 aa16.66■□□□□ 0.26
TRAFD1-201ENST00000257604 LETM2Q2VYF4 491 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms