RNA–Protein interactions for RNA: ENST00000255390.9

SCO1-201, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCO1, Length 9,612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-201ENST00000255390 LMBR1LQ6UX01 489 aa12.52□□□□□ -0.4
SCO1-201ENST00000255390 PEX26Q7Z412 305 aa12.52□□□□□ -0.4
SCO1-201ENST00000255390 BBS5Q8N3I7 341 aa12.52□□□□□ -0.4
SCO1-201ENST00000255390 FAF1Q9UNN5 650 aaPredicted RBP12.52□□□□□ -0.4
SCO1-201ENST00000255390 GOLGA8QA0A0J9YX86 632 aa12.52□□□□□ -0.41
SCO1-201ENST00000255390 GOLGA8OA6NCC3 632 aa12.52□□□□□ -0.41
SCO1-201ENST00000255390 GOLGA8NF8WBI6 632 aa12.52□□□□□ -0.41
SCO1-201ENST00000255390 IFNB1P01574 187 aa12.52□□□□□ -0.41
SCO1-201ENST00000255390 GARSP41250 739 aaKnown RBP12.52□□□□□ -0.41
SCO1-201ENST00000255390 TXKP42681 527 aa12.52□□□□□ -0.41
SCO1-201ENST00000255390 DPP8Q6V1X1 898 aaPredicted RBP12.52□□□□□ -0.41
SCO1-201ENST00000255390 EMILIN1Q9Y6C2 1016 aa12.52□□□□□ -0.41
SCO1-201ENST00000255390 AQRO60306 1485 aaKnown RBP eCLIP12.52□□□□□ -0.411e-7■■■■■ 39.7
SCO1-201ENST00000255390 CFBP00751 764 aa12.52□□□□□ -0.41
SCO1-201ENST00000255390 TMOD1P28289 359 aa12.52□□□□□ -0.41
SCO1-201ENST00000255390 OTUD7BQ6GQQ9 843 aa12.52□□□□□ -0.41
SCO1-201ENST00000255390 SUPT20HQ8NEM7 779 aa12.52□□□□□ -0.41
SCO1-201ENST00000255390 RIC8AQ9NPQ8 531 aa12.52□□□□□ -0.41
SCO1-201ENST00000255390 RNF113AO15541 343 aaKnown RBP12.52□□□□□ -0.41
SCO1-201ENST00000255390 SORBS3O60504 671 aa12.52□□□□□ -0.41
SCO1-201ENST00000255390 MAPK8IP1Q9UQF2 711 aa12.52□□□□□ -0.41
SCO1-201ENST00000255390 WASLO00401 505 aaPredicted RBP12.52□□□□□ -0.41
SCO1-201ENST00000255390 RAB20Q9NX57 234 aa12.52□□□□□ -0.41
SCO1-201ENST00000255390 KIF14Q15058 1648 aa12.52□□□□□ -0.41
SCO1-201ENST00000255390 SRGAP2BP0DMP2 458 aa12.52□□□□□ -0.41
SCO1-201ENST00000255390 RHPN1Q8TCX5 695 aa12.52□□□□□ -0.41
SCO1-201ENST00000255390 ATAD2BQ9ULI0 1458 aa12.52□□□□□ -0.41
SCO1-201ENST00000255390 GNPTABQ3T906 1256 aa12.51□□□□□ -0.41
SCO1-201ENST00000255390 CSGALNACT2Q8N6G5 542 aa12.51□□□□□ -0.41
SCO1-201ENST00000255390 IGSF22Q8N9C0 903 aa12.51□□□□□ -0.41
SCO1-201ENST00000255390 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.51□□□□□ -0.41
SCO1-201ENST00000255390 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.51□□□□□ -0.41
SCO1-201ENST00000255390 TMX3Q96JJ7 454 aa12.51□□□□□ -0.41
SCO1-201ENST00000255390 MYSM1Q5VVJ2 828 aa12.51□□□□□ -0.41
SCO1-201ENST00000255390 RSRC2Q7L4I2 434 aaKnown RBP12.51□□□□□ -0.41
SCO1-201ENST00000255390 CERS3Q8IU89 383 aa12.51□□□□□ -0.41
SCO1-201ENST00000255390 TPH2Q8IWU9 490 aa12.51□□□□□ -0.41
SCO1-201ENST00000255390 CCDC13Q8IYE1 715 aa12.51□□□□□ -0.41
SCO1-201ENST00000255390 AS3MTQ9HBK9 375 aa12.51□□□□□ -0.41
SCO1-201ENST00000255390 A6NJR5 290 aa12.51□□□□□ -0.41
SCO1-201ENST00000255390 SYT10Q6XYQ8 523 aa12.51□□□□□ -0.41
SCO1-201ENST00000255390 SZRD1Q7Z422 152 aa12.51□□□□□ -0.41
SCO1-201ENST00000255390 SLC7A5P2Q9GIP4 190 aa12.51□□□□□ -0.41
SCO1-201ENST00000255390 RAB17Q9H0T7 212 aa12.51□□□□□ -0.41
SCO1-201ENST00000255390 CEP104O60308 925 aa12.51□□□□□ -0.41
SCO1-201ENST00000255390 RSBN1LQ6PCB5 846 aaPredicted RBP12.51□□□□□ -0.41
SCO1-201ENST00000255390 CFTRP13569 1480 aa12.51□□□□□ -0.41
SCO1-201ENST00000255390 PHLDB3Q6NSJ2 640 aa12.51□□□□□ -0.41
SCO1-201ENST00000255390 MIS12Q9H081 205 aa12.51□□□□□ -0.41
SCO1-201ENST00000255390 ZSCAN32Q9NX65 697 aa12.51□□□□□ -0.41
SCO1-201ENST00000255390 THEGQ9P2T0 379 aa12.51□□□□□ -0.41
SCO1-201ENST00000255390 TESPA1A2RU30 521 aaPredicted RBP12.5□□□□□ -0.41
SCO1-201ENST00000255390 PABPC4Q13310 644 aaKnown RBP eCLIP12.5□□□□□ -0.413e-6■■■■□ 19.6
SCO1-201ENST00000255390 PUM3Q15397 648 aaKnown RBP12.5□□□□□ -0.41
SCO1-201ENST00000255390 HADHQ16836 314 aaKnown RBP12.5□□□□□ -0.41
SCO1-201ENST00000255390 PIK3AP1Q6ZUJ8 805 aa12.5□□□□□ -0.41
SCO1-201ENST00000255390 NUP58Q9BVL2 599 aa12.5□□□□□ -0.41
SCO1-201ENST00000255390 TPX2Q9ULW0 747 aaKnown RBP12.5□□□□□ -0.41
SCO1-201ENST00000255390 HERC4Q5GLZ8 1057 aaPredicted RBP12.5□□□□□ -0.41
SCO1-201ENST00000255390 IL2RBP14784 551 aa12.5□□□□□ -0.41
SCO1-201ENST00000255390 ARHGAP44Q17R89 818 aa12.5□□□□□ -0.41
SCO1-201ENST00000255390 LZICQ8WZA0 190 aa12.5□□□□□ -0.41
SCO1-201ENST00000255390 HESX1Q9UBX0 185 aa12.5□□□□□ -0.41
SCO1-201ENST00000255390 F8W8V4 182 aa12.5□□□□□ -0.41
SCO1-201ENST00000255390 TRIM27P14373 513 aa12.5□□□□□ -0.41
SCO1-201ENST00000255390 LIG4P49917 911 aa12.5□□□□□ -0.41
SCO1-201ENST00000255390 SLC39A6Q13433 755 aa12.5□□□□□ -0.41
SCO1-201ENST00000255390 CDC37L1Q7L3B6 337 aa12.5□□□□□ -0.41
SCO1-201ENST00000255390 CDCA7Q9BWT1 371 aaPredicted RBP12.5□□□□□ -0.41
SCO1-201ENST00000255390 GAS7O60861 476 aa12.5□□□□□ -0.41
SCO1-201ENST00000255390 ADCY7P51828 1080 aa12.5□□□□□ -0.41
SCO1-201ENST00000255390 KLHL7Q8IXQ5 586 aa12.5□□□□□ -0.41
SCO1-201ENST00000255390 SLC12A6Q9UHW9 1150 aa12.5□□□□□ -0.41
SCO1-201ENST00000255390 STX2P32856 288 aa12.5□□□□□ -0.41
SCO1-201ENST00000255390 DRC3Q9H069 523 aa12.5□□□□□ -0.41
SCO1-201ENST00000255390 FAM170AA1A519 330 aa12.5□□□□□ -0.41
SCO1-201ENST00000255390 LRMPQ12912 555 aa12.5□□□□□ -0.41
SCO1-201ENST00000255390 NMIQ13287 307 aaPredicted RBP12.5□□□□□ -0.41
SCO1-201ENST00000255390 MTMR3Q13615 1198 aa12.49□□□□□ -0.41
SCO1-201ENST00000255390 ANGPTL8Q6UXH0 198 aa12.49□□□□□ -0.41
SCO1-201ENST00000255390 DCPSQ96C86 337 aaKnown RBP12.49□□□□□ -0.41
SCO1-201ENST00000255390 FOXD4Q12950 439 aaPredicted RBP12.49□□□□□ -0.41
SCO1-201ENST00000255390 MMTAG2Q9BU76 263 aaKnown RBP12.49□□□□□ -0.41
SCO1-201ENST00000255390 TBC1D2Q9BYX2 928 aa12.49□□□□□ -0.41
SCO1-201ENST00000255390 NPHP3Q7Z494 1330 aa12.49□□□□□ -0.41
SCO1-201ENST00000255390 TLR3O15455 904 aaKnown RBP12.49□□□□□ -0.41
SCO1-201ENST00000255390 VPS41P49754 854 aa12.49□□□□□ -0.41
SCO1-201ENST00000255390 TMEM247A6NEH6 219 aa12.49□□□□□ -0.41
SCO1-201ENST00000255390 DMP1Q13316 513 aaPredicted RBP12.49□□□□□ -0.41
SCO1-201ENST00000255390 MCUQ8NE86 351 aa12.49□□□□□ -0.41
SCO1-201ENST00000255390 SECISBP2LQ93073 1101 aaKnown RBP12.49□□□□□ -0.41
SCO1-201ENST00000255390 PPWD1Q96BP3 646 aaKnown RBP12.49□□□□□ -0.41
SCO1-201ENST00000255390 CCDC87Q9NVE4 849 aa12.49□□□□□ -0.41
SCO1-201ENST00000255390 TPCN1Q9ULQ1 816 aa12.49□□□□□ -0.41
SCO1-201ENST00000255390 POLR2DO15514 142 aaKnown RBP12.49□□□□□ -0.41
SCO1-201ENST00000255390 DISC1Q9NRI5 854 aa12.49□□□□□ -0.41
SCO1-201ENST00000255390 CFAP221Q4G0U5 840 aa12.49□□□□□ -0.41
SCO1-201ENST00000255390 SFMBT2Q5VUG0 894 aa12.49□□□□□ -0.41
SCO1-201ENST00000255390 FAM186BQ8IYM0 893 aa12.49□□□□□ -0.41
SCO1-201ENST00000255390 MICAL1Q8TDZ2 1067 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms