RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 FAM84BQ96KN1 310 aaPredicted RBP21.51■■□□□ 1.03
SNX4-201ENST00000251775 MAN1B1Q9UKM7 699 aa21.51■■□□□ 1.03
SNX4-201ENST00000251775 TNKSO95271 1327 aa21.51■■□□□ 1.03
SNX4-201ENST00000251775 CYP2D7A0A087X1C5 515 aa21.5■■□□□ 1.03
SNX4-201ENST00000251775 NR5A1Q13285 461 aa21.5■■□□□ 1.03
SNX4-201ENST00000251775 SPECC1Q5M775 1068 aa21.5■■□□□ 1.03
SNX4-201ENST00000251775 PLCD3Q8N3E9 789 aa21.5■■□□□ 1.03
SNX4-201ENST00000251775 PDE11AQ9HCR9 933 aa21.5■■□□□ 1.03
SNX4-201ENST00000251775 RSPH14Q9UHP6 348 aa21.5■■□□□ 1.03
SNX4-201ENST00000251775 CCDC196A0A1B0GTZ2 297 aa21.5■■□□□ 1.03
SNX4-201ENST00000251775 RCAN1P53805 252 aa21.5■■□□□ 1.03
SNX4-201ENST00000251775 GRIN1Q05586 938 aa21.5■■□□□ 1.03
SNX4-201ENST00000251775 KRI1Q8N9T8 703 aaKnown RBP21.5■■□□□ 1.03
SNX4-201ENST00000251775 ESR2Q92731 530 aa21.5■■□□□ 1.03
SNX4-201ENST00000251775 FOXP1Q9H334 677 aaPredicted RBP21.5■■□□□ 1.03
SNX4-201ENST00000251775 CAVIN4Q5BKX8 364 aa21.49■■□□□ 1.03
SNX4-201ENST00000251775 TBC1D9BQ66K14 1250 aa21.49■■□□□ 1.03
SNX4-201ENST00000251775 ZNF831Q5JPB2 1677 aa21.49■■□□□ 1.03
SNX4-201ENST00000251775 SOWAHDA6NJG2 315 aa21.49■■□□□ 1.03
SNX4-201ENST00000251775 CCDC175P0C221 793 aa21.49■■□□□ 1.03
SNX4-201ENST00000251775 USP5P45974 858 aa21.49■■□□□ 1.03
SNX4-201ENST00000251775 TRMT44Q8IYL2 757 aaKnown RBP21.49■■□□□ 1.03
SNX4-201ENST00000251775 OXER1Q8TDS5 423 aa21.49■■□□□ 1.03
SNX4-201ENST00000251775 MED15Q96RN5 788 aa21.49■■□□□ 1.03
SNX4-201ENST00000251775 VPS18Q9P253 973 aa21.49■■□□□ 1.03
SNX4-201ENST00000251775 RRP15Q9Y3B9 282 aaKnown RBP21.49■■□□□ 1.03
SNX4-201ENST00000251775 DUOX1Q9NRD9 1551 aa21.48■■□□□ 1.03
SNX4-201ENST00000251775 MCM6Q14566 821 aa21.48■■□□□ 1.03
SNX4-201ENST00000251775 ELOA2Q8IYF1 753 aaPredicted RBP21.48■■□□□ 1.03
SNX4-201ENST00000251775 ENOX1Q8TC92 643 aaKnown RBP21.48■■□□□ 1.03
SNX4-201ENST00000251775 SHISA4Q96DD7 197 aa21.48■■□□□ 1.03
SNX4-201ENST00000251775 PNKPQ96T60 521 aa21.48■■□□□ 1.03
SNX4-201ENST00000251775 PUF60Q9UHX1 559 aaKnown RBP21.48■■□□□ 1.03
SNX4-201ENST00000251775 RAB21Q9UL25 225 aa21.48■■□□□ 1.03
SNX4-201ENST00000251775 A0A0U1RQJ8 604 aa21.48■■□□□ 1.03
SNX4-201ENST00000251775 KLRK1P26718 216 aa21.48■■□□□ 1.03
SNX4-201ENST00000251775 NR1I3Q14994 352 aa21.48■■□□□ 1.03
SNX4-201ENST00000251775 ENAHQ8N8S7 591 aaPredicted RBP21.48■■□□□ 1.03
SNX4-201ENST00000251775 MSANTD4Q8NCY6 345 aa21.48■■□□□ 1.03
SNX4-201ENST00000251775 ATRIPQ8WXE1 791 aa21.48■■□□□ 1.03
SNX4-201ENST00000251775 LZTFL1Q9NQ48 299 aa21.48■■□□□ 1.03
SNX4-201ENST00000251775 FBXO2Q9UK22 296 aaPredicted RBP21.48■■□□□ 1.03
SNX4-201ENST00000251775 PCDHB6Q9Y5E3 794 aa21.48■■□□□ 1.03
SNX4-201ENST00000251775 RILPL1Q5EBL4 403 aa21.47■■□□□ 1.03
SNX4-201ENST00000251775 CDC23Q9UJX2 597 aa21.47■■□□□ 1.03
SNX4-201ENST00000251775 PTPREP23469 700 aa21.47■■□□□ 1.03
SNX4-201ENST00000251775 POSTNQ15063 836 aa21.47■■□□□ 1.03
SNX4-201ENST00000251775 ZNF827Q17R98 1081 aa21.47■■□□□ 1.03
SNX4-201ENST00000251775 SLC10A5Q5PT55 438 aa21.47■■□□□ 1.03
SNX4-201ENST00000251775 PTF1AQ7RTS3 328 aa21.47■■□□□ 1.03
SNX4-201ENST00000251775 HDXQ7Z353 690 aa21.47■■□□□ 1.03
SNX4-201ENST00000251775 SAMSN1Q9NSI8 373 aaKnown RBP21.47■■□□□ 1.03
SNX4-201ENST00000251775 ADGRG1Q9Y653 693 aa21.47■■□□□ 1.03
SNX4-201ENST00000251775 MYH13Q9UKX3 1938 aa21.46■■□□□ 1.03
SNX4-201ENST00000251775 PRR29P0C7W0 189 aa21.46■■□□□ 1.03
SNX4-201ENST00000251775 FAM98CQ17RN3 349 aaKnown RBP21.46■■□□□ 1.03
SNX4-201ENST00000251775 NT5DC1Q5TFE4 455 aa21.46■■□□□ 1.03
SNX4-201ENST00000251775 RAD9BQ6WBX8 426 aa21.46■■□□□ 1.03
SNX4-201ENST00000251775 MLKLQ8NB16 471 aa21.46■■□□□ 1.03
SNX4-201ENST00000251775 ZSCAN10Q96SZ4 725 aaPredicted RBP21.46■■□□□ 1.03
SNX4-201ENST00000251775 BRIP1Q9BX63 1249 aa21.46■■□□□ 1.03
SNX4-201ENST00000251775 PRDM1O75626 825 aa21.46■■□□□ 1.03
SNX4-201ENST00000251775 FBXO33Q7Z6M2 555 aa21.46■■□□□ 1.03
SNX4-201ENST00000251775 MSL3Q8N5Y2 521 aaKnown RBP21.46■■□□□ 1.03
SNX4-201ENST00000251775 CEP112Q8N8E3 955 aa21.46■■□□□ 1.03
SNX4-201ENST00000251775 PANX2Q96RD6 677 aa21.46■■□□□ 1.03
SNX4-201ENST00000251775 RNF26Q9BY78 433 aaPredicted RBP21.46■■□□□ 1.03
SNX4-201ENST00000251775 L1RE1Q9UN81 338 aa21.46■■□□□ 1.03
SNX4-201ENST00000251775 AKR1B15C9JRZ8 316 aaPredicted RBP21.45■■□□□ 1.02
SNX4-201ENST00000251775 N4BP1O75113 896 aaKnown RBP21.45■■□□□ 1.02
SNX4-201ENST00000251775 TNNT3P45378 269 aaPredicted RBP21.45■■□□□ 1.02
SNX4-201ENST00000251775 SARSP49591 514 aaKnown RBP21.45■■□□□ 1.02
SNX4-201ENST00000251775 MORC3Q14149 939 aa21.45■■□□□ 1.02
SNX4-201ENST00000251775 SUGCTQ9HAC7 445 aa21.45■■□□□ 1.02
SNX4-201ENST00000251775 POTEB2H3BUK9 544 aa21.45■■□□□ 1.02
SNX4-201ENST00000251775 EVX2Q03828 476 aa21.45■■□□□ 1.02
SNX4-201ENST00000251775 PKN1Q16512 942 aa21.45■■□□□ 1.02
SNX4-201ENST00000251775 LEKR1Q6ZMV7 388 aa21.45■■□□□ 1.02
SNX4-201ENST00000251775 EFCC1Q9HA90 598 aa21.45■■□□□ 1.02
SNX4-201ENST00000251775 ABCB6Q9NP58 842 aa21.45■■□□□ 1.02
SNX4-201ENST00000251775 DLEC1Q9Y238 1755 aa21.44■■□□□ 1.02
SNX4-201ENST00000251775 A0A1B0GTH6 734 aa21.44■■□□□ 1.02
SNX4-201ENST00000251775 ATP2B1P20020 1258 aa21.44■■□□□ 1.02
SNX4-201ENST00000251775 FUT2Q10981 343 aa21.44■■□□□ 1.02
SNX4-201ENST00000251775 CTR9Q6PD62 1173 aa21.44■■□□□ 1.02
SNX4-201ENST00000251775 ZBTB9Q96C00 473 aa21.44■■□□□ 1.02
SNX4-201ENST00000251775 CABP5Q9NP86 173 aa21.44■■□□□ 1.02
SNX4-201ENST00000251775 HOOK1Q9UJC3 728 aaKnown RBP21.44■■□□□ 1.02
SNX4-201ENST00000251775 LTBP4Q8N2S1 1624 aa21.44■■□□□ 1.02
SNX4-201ENST00000251775 CNTNAP4Q9C0A0 1308 aa21.44■■□□□ 1.02
SNX4-201ENST00000251775 NSUN4Q96CB9 384 aaKnown RBP21.44■■□□□ 1.02
SNX4-201ENST00000251775 VPS54Q9P1Q0 977 aa21.44■■□□□ 1.02
SNX4-201ENST00000251775 SRP68Q9UHB9 627 aaKnown RBP21.44■■□□□ 1.02
SNX4-201ENST00000251775 DACH1Q9UI36 760 aa21.44■■□□□ 1.02
SNX4-201ENST00000251775 hCG_1642624A0A1W2PR95 340 aa21.43■■□□□ 1.02
SNX4-201ENST00000251775 FAM205CA6NFA0 338 aa21.43■■□□□ 1.02
SNX4-201ENST00000251775 KIF5CO60282 957 aa21.43■■□□□ 1.02
SNX4-201ENST00000251775 IVLP07476 585 aa21.43■■□□□ 1.02
SNX4-201ENST00000251775 FGRP09769 529 aa21.43■■□□□ 1.02
SNX4-201ENST00000251775 FAN1Q9Y2M0 1017 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms