RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 ST18O60284 1047 aa23.6■■□□□ 1.37
SNRPA-201ENST00000243563 DTNBO60941 627 aa23.6■■□□□ 1.37
SNRPA-201ENST00000243563 MTMR2Q13614 643 aa23.6■■□□□ 1.37
SNRPA-201ENST00000243563 ME3Q16798 604 aa23.6■■□□□ 1.37
SNRPA-201ENST00000243563 ERO1BQ86YB8 467 aa23.6■■□□□ 1.37
SNRPA-201ENST00000243563 CCDC144CPQ8IYA2 1237 aa23.6■■□□□ 1.37
SNRPA-201ENST00000243563 TLL2Q9Y6L7 1015 aa23.6■■□□□ 1.37
SNRPA-201ENST00000243563 PARP14Q460N5 1801 aa23.6■■□□□ 1.37
SNRPA-201ENST00000243563 CCDC69A6NI79 296 aa23.59■■□□□ 1.37
SNRPA-201ENST00000243563 TMEM88BA6NKF7 163 aa23.59■■□□□ 1.37
SNRPA-201ENST00000243563 IRF6O14896 467 aa23.59■■□□□ 1.37
SNRPA-201ENST00000243563 TROAPQ12815 778 aa23.59■■□□□ 1.37
SNRPA-201ENST00000243563 ZNF280CQ8ND82 737 aa23.59■■□□□ 1.37
SNRPA-201ENST00000243563 SLC10A4Q96EP9 437 aa23.59■■□□□ 1.37
SNRPA-201ENST00000243563 ARHGEF10LQ9HCE6 1279 aa23.59■■□□□ 1.37
SNRPA-201ENST00000243563 PDIA3P30101 505 aaKnown RBP23.59■■□□□ 1.37
SNRPA-201ENST00000243563 MKRN3Q13064 507 aaKnown RBP23.59■■□□□ 1.37
SNRPA-201ENST00000243563 STK3Q13188 491 aa23.59■■□□□ 1.37
SNRPA-201ENST00000243563 MICU3Q86XE3 530 aa23.59■■□□□ 1.37
SNRPA-201ENST00000243563 WNK4Q96J92 1243 aa23.59■■□□□ 1.37
SNRPA-201ENST00000243563 NAP1L2Q9ULW6 460 aaPredicted RBP23.59■■□□□ 1.37
SNRPA-201ENST00000243563 GOLGA8BA8MQT2 603 aa23.58■■□□□ 1.36
SNRPA-201ENST00000243563 PPATQ06203 517 aa23.58■■□□□ 1.36
SNRPA-201ENST00000243563 SPICE1Q8N0Z3 855 aa23.58■■□□□ 1.36
SNRPA-201ENST00000243563 NECAB1Q8N987 351 aa23.58■■□□□ 1.36
SNRPA-201ENST00000243563 NUP88Q99567 741 aaPredicted RBP23.58■■□□□ 1.36
SNRPA-201ENST00000243563 EMILIN3Q9NT22 766 aa23.58■■□□□ 1.36
SNRPA-201ENST00000243563 SLC12A7Q9Y666 1083 aa23.58■■□□□ 1.36
SNRPA-201ENST00000243563 F5H6K3 240 aa23.57■■□□□ 1.36
SNRPA-201ENST00000243563 NDUFB10O96000 172 aa23.57■■□□□ 1.36
SNRPA-201ENST00000243563 KLRC3Q07444 240 aa23.57■■□□□ 1.36
SNRPA-201ENST00000243563 PPIL2Q13356 520 aa23.57■■□□□ 1.36
SNRPA-201ENST00000243563 ANKRD1Q15327 319 aa23.57■■□□□ 1.36
SNRPA-201ENST00000243563 RASAL3Q86YV0 1011 aa23.57■■□□□ 1.36
SNRPA-201ENST00000243563 NUP133Q8WUM0 1156 aa23.57■■□□□ 1.36
SNRPA-201ENST00000243563 FEZ1Q99689 392 aa23.57■■□□□ 1.36
SNRPA-201ENST00000243563 TBC1D2Q9BYX2 928 aa23.57■■□□□ 1.36
SNRPA-201ENST00000243563 KIAA1683Q9H0B3 1180 aa23.57■■□□□ 1.36
SNRPA-201ENST00000243563 AS3MTQ9HBK9 375 aa23.57■■□□□ 1.36
SNRPA-201ENST00000243563 NCOA5Q9HCD5 579 aaKnown RBP23.57■■□□□ 1.36
SNRPA-201ENST00000243563 FAM217BQ9NTX9 383 aaPredicted RBP23.57■■□□□ 1.36
SNRPA-201ENST00000243563 LIMCH1Q9UPQ0 1083 aa23.57■■□□□ 1.36
SNRPA-201ENST00000243563 RLFQ13129 1914 aa23.56■■□□□ 1.36
SNRPA-201ENST00000243563 UNCXA6NJT0 531 aa23.56■■□□□ 1.36
SNRPA-201ENST00000243563 USP17L10C9JJH3 530 aa23.56■■□□□ 1.36
SNRPA-201ENST00000243563 RAD21O60216 631 aa23.56■■□□□ 1.36
SNRPA-201ENST00000243563 PDHBP11177 359 aa23.56■■□□□ 1.36
SNRPA-201ENST00000243563 HMGCS2P54868 508 aa23.56■■□□□ 1.36
SNRPA-201ENST00000243563 BACE1P56817 501 aa23.56■■□□□ 1.36
SNRPA-201ENST00000243563 CCT2P78371 535 aaKnown RBP23.56■■□□□ 1.36
SNRPA-201ENST00000243563 TMTC2Q8N394 836 aa23.56■■□□□ 1.36
SNRPA-201ENST00000243563 GMCL1P1Q8NEA9 526 aa23.56■■□□□ 1.36
SNRPA-201ENST00000243563 SNX21Q969T3 373 aa23.56■■□□□ 1.36
SNRPA-201ENST00000243563 VCPKMTQ9H867 229 aa23.56■■□□□ 1.36
SNRPA-201ENST00000243563 ABT1Q9ULW3 272 aaKnown RBP23.56■■□□□ 1.36
SNRPA-201ENST00000243563 GOLGA8HP0CJ92 632 aa23.55■■□□□ 1.36
SNRPA-201ENST00000243563 SNHG28P0DPA3 235 aa23.55■■□□□ 1.36
SNRPA-201ENST00000243563 CDC27P30260 824 aa23.55■■□□□ 1.36
SNRPA-201ENST00000243563 SLFN13Q68D06 897 aa23.55■■□□□ 1.36
SNRPA-201ENST00000243563 USP17L2Q6R6M4 530 aa23.55■■□□□ 1.36
SNRPA-201ENST00000243563 CATIPQ7Z7H3 387 aa23.55■■□□□ 1.36
SNRPA-201ENST00000243563 STAG2Q8N3U4 1231 aa23.55■■□□□ 1.36
SNRPA-201ENST00000243563 ZNF274Q96GC6 653 aaPredicted RBP23.55■■□□□ 1.36
SNRPA-201ENST00000243563 TMX3Q96JJ7 454 aa23.55■■□□□ 1.36
SNRPA-201ENST00000243563 KCNH4Q9UQ05 1017 aa23.55■■□□□ 1.36
SNRPA-201ENST00000243563 FRMPD2Q68DX3 1309 aaPredicted RBP23.55■■□□□ 1.36
SNRPA-201ENST00000243563 ZBTB43O43298 467 aa23.55■■□□□ 1.36
SNRPA-201ENST00000243563 DDAH1O94760 285 aa23.55■■□□□ 1.36
SNRPA-201ENST00000243563 APLP1P51693 650 aa23.55■■□□□ 1.36
SNRPA-201ENST00000243563 HTRA3P83110 453 aa23.55■■□□□ 1.36
SNRPA-201ENST00000243563 MOGSQ13724 837 aa23.55■■□□□ 1.36
SNRPA-201ENST00000243563 SLC35G1Q2M3R5 365 aa23.55■■□□□ 1.36
SNRPA-201ENST00000243563 PPP4R3BQ5MIZ7 849 aa23.55■■□□□ 1.36
SNRPA-201ENST00000243563 CPVLQ9H3G5 476 aa23.55■■□□□ 1.36
SNRPA-201ENST00000243563 NID2Q14112 1375 aa23.54■■□□□ 1.36
SNRPA-201ENST00000243563 ZNF157P51786 506 aaPredicted RBP23.54■■□□□ 1.36
SNRPA-201ENST00000243563 SCRN1Q12765 414 aa23.54■■□□□ 1.36
SNRPA-201ENST00000243563 GRM4Q14833 912 aa23.54■■□□□ 1.36
SNRPA-201ENST00000243563 SPRYD7Q5W111 196 aa23.54■■□□□ 1.36
SNRPA-201ENST00000243563 RGMBQ6NW40 437 aa23.54■■□□□ 1.36
SNRPA-201ENST00000243563 MAD2L2Q9UI95 211 aa23.54■■□□□ 1.36
SNRPA-201ENST00000243563 BAZ2BQ9UIF8 2168 aaKnown RBP23.53■■□□□ 1.36
SNRPA-201ENST00000243563 GOLGA8AA7E2F4 631 aa23.53■■□□□ 1.36
SNRPA-201ENST00000243563 FAM155AB1AL88 458 aaPredicted RBP23.53■■□□□ 1.36
SNRPA-201ENST00000243563 PFKFB2O60825 505 aa23.53■■□□□ 1.36
SNRPA-201ENST00000243563 KCTD1Q719H9 257 aa23.53■■□□□ 1.36
SNRPA-201ENST00000243563 CMTR1Q8N1G2 835 aaKnown RBP23.53■■□□□ 1.36
SNRPA-201ENST00000243563 A0A0G2JLL6 359 aaPredicted RBP23.52■■□□□ 1.36
SNRPA-201ENST00000243563 PLEKHA8P1O95397 391 aa23.52■■□□□ 1.36
SNRPA-201ENST00000243563 SH3D19Q5HYK7 790 aa23.52■■□□□ 1.36
SNRPA-201ENST00000243563 FAM83BQ5T0W9 1011 aa23.52■■□□□ 1.36
SNRPA-201ENST00000243563 TTBK2Q6IQ55 1244 aa23.52■■□□□ 1.36
SNRPA-201ENST00000243563 PRRT2Q7Z6L0 340 aaPredicted RBP23.52■■□□□ 1.36
SNRPA-201ENST00000243563 NBPF11Q86T75 865 aa23.52■■□□□ 1.36
SNRPA-201ENST00000243563 SH2D4AQ9H788 454 aa23.52■■□□□ 1.36
SNRPA-201ENST00000243563 GOPCQ9HD26 462 aa23.52■■□□□ 1.36
SNRPA-201ENST00000243563 SYNPO2Q9UMS6 1093 aa23.52■■□□□ 1.36
SNRPA-201ENST00000243563 MYH6P13533 1939 aa23.52■■□□□ 1.36
SNRPA-201ENST00000243563 PPFIA3O75145 1194 aa23.51■■□□□ 1.35
SNRPA-201ENST00000243563 VCAM1P19320 739 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms