RNA–Protein interactions for RNA: ENST00000243040.10

PFDN5-201, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-201ENST00000243040 ZNF213O14771 459 aa12.6□□□□□ -0.39
PFDN5-201ENST00000243040 WDR46O15213 610 aaKnown RBP12.6□□□□□ -0.39
PFDN5-201ENST00000243040 GNRH1P01148 92 aa12.6□□□□□ -0.39
PFDN5-201ENST00000243040 NOVP48745 357 aa12.6□□□□□ -0.39
PFDN5-201ENST00000243040 HAND2P61296 217 aa12.6□□□□□ -0.39
PFDN5-201ENST00000243040 HERVK_113P62684 666 aa12.6□□□□□ -0.39
PFDN5-201ENST00000243040 TFAP4Q01664 338 aa12.6□□□□□ -0.39
PFDN5-201ENST00000243040 ARHGEF6Q15052 776 aa12.6□□□□□ -0.39
PFDN5-201ENST00000243040 PPP4R3BQ5MIZ7 849 aa12.6□□□□□ -0.39
PFDN5-201ENST00000243040 AKNAD1Q5T1N1 836 aa12.6□□□□□ -0.39
PFDN5-201ENST00000243040 LBX2Q6XYB7 198 aa12.6□□□□□ -0.39
PFDN5-201ENST00000243040 CATSPERGQ6ZRH7 1159 aa12.6□□□□□ -0.39
PFDN5-201ENST00000243040 OTOP1Q7RTM1 612 aa12.6□□□□□ -0.39
PFDN5-201ENST00000243040 TBC1D10CQ8IV04 446 aa12.6□□□□□ -0.39
PFDN5-201ENST00000243040 MKL1Q969V6 931 aa12.6□□□□□ -0.39
PFDN5-201ENST00000243040 CEP95Q96GE4 821 aa12.6□□□□□ -0.39
PFDN5-201ENST00000243040 RNF41Q9H4P4 317 aaPredicted RBP12.6□□□□□ -0.39
PFDN5-201ENST00000243040 RPAP3Q9H6T3 665 aaPredicted RBP12.6□□□□□ -0.39
PFDN5-201ENST00000243040 MTMR4Q9NYA4 1195 aa12.6□□□□□ -0.39
PFDN5-201ENST00000243040 MORF4L1Q9UBU8 362 aa12.6□□□□□ -0.39
PFDN5-201ENST00000243040 CTNNA3Q9UI47 895 aa12.6□□□□□ -0.39
PFDN5-201ENST00000243040 DOCK3Q8IZD9 2030 aa12.6□□□□□ -0.39
PFDN5-201ENST00000243040 TSPY2A6NKD2 308 aa12.59□□□□□ -0.39
PFDN5-201ENST00000243040 TTLL1O95922 423 aa12.59□□□□□ -0.39
PFDN5-201ENST00000243040 KIF22Q14807 665 aa12.59□□□□□ -0.39
PFDN5-201ENST00000243040 IMMTQ16891 758 aaKnown RBP12.59□□□□□ -0.39
PFDN5-201ENST00000243040 FAM47AQ5JRC9 791 aa12.59□□□□□ -0.39
PFDN5-201ENST00000243040 KIAA1755Q5JYT7 1200 aa12.59□□□□□ -0.39
PFDN5-201ENST00000243040 FBXO46Q6PJ61 603 aaPredicted RBP12.59□□□□□ -0.39
PFDN5-201ENST00000243040 P2RX7Q99572 595 aaKnown RBP12.59□□□□□ -0.39
PFDN5-201ENST00000243040 EFCC1Q9HA90 598 aa12.59□□□□□ -0.39
PFDN5-201ENST00000243040 GOPCQ9HD26 462 aa12.59□□□□□ -0.39
PFDN5-201ENST00000243040 TRIM17Q9Y577 477 aa12.59□□□□□ -0.39
PFDN5-201ENST00000243040 MYPNQ86TC9 1320 aa12.59□□□□□ -0.39
PFDN5-201ENST00000243040 RBBP6Q7Z6E9 1792 aaKnown RBP12.58□□□□□ -0.39
PFDN5-201ENST00000243040 ZNF236Q9UL36 1845 aa12.58□□□□□ -0.4
PFDN5-201ENST00000243040 SPDYE16A6NNV3 312 aaPredicted RBP12.58□□□□□ -0.4
PFDN5-201ENST00000243040 RANBP6O60518 1105 aaKnown RBP12.58□□□□□ -0.4
PFDN5-201ENST00000243040 CTGFP29279 349 aa12.58□□□□□ -0.4
PFDN5-201ENST00000243040 ATP2B2Q01814 1243 aa12.58□□□□□ -0.4
PFDN5-201ENST00000243040 MFSD6Q6ZSS7 791 aa12.58□□□□□ -0.4
PFDN5-201ENST00000243040 ANKRD13CQ8N6S4 541 aa12.58□□□□□ -0.4
PFDN5-201ENST00000243040 ESYT1Q9BSJ8 1104 aa12.58□□□□□ -0.4
PFDN5-201ENST00000243040 ARHGAP39Q9C0H5 1083 aa12.58□□□□□ -0.4
PFDN5-201ENST00000243040 INCENPQ9NQS7 918 aa12.58□□□□□ -0.4
PFDN5-201ENST00000243040 TCP11L1Q9NUJ3 509 aa12.58□□□□□ -0.4
PFDN5-201ENST00000243040 NEDD4P46934 1319 aa12.58□□□□□ -0.4
PFDN5-201ENST00000243040 PRMT2P55345 433 aa12.57□□□□□ -0.4
PFDN5-201ENST00000243040 FCGRTP55899 365 aa12.57□□□□□ -0.4
PFDN5-201ENST00000243040 PTH1RQ03431 593 aa12.57□□□□□ -0.4
PFDN5-201ENST00000243040 POTEEQ6S8J3 1075 aa12.57□□□□□ -0.4
PFDN5-201ENST00000243040 GMCL1P1Q8NEA9 526 aa12.57□□□□□ -0.4
PFDN5-201ENST00000243040 TRIM47Q96LD4 638 aa12.57□□□□□ -0.4
PFDN5-201ENST00000243040 TXNRD2Q9NNW7 524 aa12.57□□□□□ -0.4
PFDN5-201ENST00000243040 IL17RBQ9NRM6 502 aa12.57□□□□□ -0.4
PFDN5-201ENST00000243040 CLIP2Q9UDT6 1046 aa12.57□□□□□ -0.4
PFDN5-201ENST00000243040 PTPN22Q9Y2R2 807 aa12.57□□□□□ -0.4
PFDN5-201ENST00000243040 RABGAP1Q9Y3P9 1069 aa12.57□□□□□ -0.4
PFDN5-201ENST00000243040 U3KPZ7 1027 aaPredicted RBP12.57□□□□□ -0.4
PFDN5-201ENST00000243040 CENPFP49454 3210 aa12.56□□□□□ -0.4
PFDN5-201ENST00000243040 F5H6K3 240 aa12.56□□□□□ -0.4
PFDN5-201ENST00000243040 CDC45O75419 566 aa12.56□□□□□ -0.4
PFDN5-201ENST00000243040 NDUFB10O96000 172 aa12.56□□□□□ -0.4
PFDN5-201ENST00000243040 PSMC4P43686 418 aa12.56□□□□□ -0.4
PFDN5-201ENST00000243040 ERVK-9P63128 1117 aa12.56□□□□□ -0.4
PFDN5-201ENST00000243040 ERVK-24P63145 666 aa12.56□□□□□ -0.4
PFDN5-201ENST00000243040 KLRC3Q07444 240 aa12.56□□□□□ -0.4
PFDN5-201ENST00000243040 COG2Q14746 738 aa12.56□□□□□ -0.4
PFDN5-201ENST00000243040 RRP12Q5JTH9 1297 aaKnown RBP12.56□□□□□ -0.4
PFDN5-201ENST00000243040 SPICE1Q8N0Z3 855 aa12.56□□□□□ -0.4
PFDN5-201ENST00000243040 LRRC47Q8N1G4 583 aaKnown RBP12.56□□□□□ -0.4
PFDN5-201ENST00000243040 ESR2Q92731 530 aa12.56□□□□□ -0.4
PFDN5-201ENST00000243040 MAP4K1Q92918 833 aa12.56□□□□□ -0.4
PFDN5-201ENST00000243040 ABHD8Q96I13 439 aa12.56□□□□□ -0.4
PFDN5-201ENST00000243040 TANGO6Q9C0B7 1094 aa12.56□□□□□ -0.4
PFDN5-201ENST00000243040 LSG1Q9H089 658 aaKnown RBP12.56□□□□□ -0.4
PFDN5-201ENST00000243040 TOMM22Q9NS69 142 aa12.56□□□□□ -0.4
PFDN5-201ENST00000243040 RBPJLQ9UBG7 517 aa12.56□□□□□ -0.4
PFDN5-201ENST00000243040 NMT2O60551 498 aa12.55□□□□□ -0.4
PFDN5-201ENST00000243040 CNMDO75829 334 aa12.55□□□□□ -0.4
PFDN5-201ENST00000243040 FLOT1O75955 427 aa12.55□□□□□ -0.4
PFDN5-201ENST00000243040 CYP21A2P08686 494 aa12.55□□□□□ -0.4
PFDN5-201ENST00000243040 HOXD10P28358 340 aa12.55□□□□□ -0.4
PFDN5-201ENST00000243040 DSG3P32926 999 aa12.55□□□□□ -0.4
PFDN5-201ENST00000243040 FAM83BQ5T0W9 1011 aa12.55□□□□□ -0.4
PFDN5-201ENST00000243040 CASC1Q6TDU7 716 aa12.55□□□□□ -0.4
PFDN5-201ENST00000243040 MB21D1Q8N884 522 aa12.55□□□□□ -0.4
PFDN5-201ENST00000243040 GPRC5AQ8NFJ5 357 aa12.55□□□□□ -0.4
PFDN5-201ENST00000243040 CNNM2Q9H8M5 875 aa12.55□□□□□ -0.4
PFDN5-201ENST00000243040 HOXC10Q9NYD6 342 aa12.55□□□□□ -0.4
PFDN5-201ENST00000243040 SRRDQ9UH36 339 aa12.55□□□□□ -0.4
PFDN5-201ENST00000243040 STX8Q9UNK0 236 aa12.55□□□□□ -0.4
PFDN5-201ENST00000243040 HPS5Q9UPZ3 1129 aa12.55□□□□□ -0.4
PFDN5-201ENST00000243040 FMNL1O95466 1100 aaPredicted RBP12.54□□□□□ -0.4
PFDN5-201ENST00000243040 KIAA1211Q6ZU35 1233 aa12.54□□□□□ -0.4
PFDN5-201ENST00000243040 NKX2-3Q8TAU0 364 aa12.54□□□□□ -0.4
PFDN5-201ENST00000243040 GMCL1Q96IK5 515 aa12.54□□□□□ -0.4
PFDN5-201ENST00000243040 TTC14Q96N46 770 aa12.54□□□□□ -0.4
PFDN5-201ENST00000243040 PAGR1Q9BTK6 254 aa12.54□□□□□ -0.4
PFDN5-201ENST00000243040 KRT23Q9C075 422 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms