RNA–Protein interactions for RNA: ENST00000239690.8

NUDCD1-201, Transcript of NudC domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD1, Length 4,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-201ENST00000239690 CCDC160A6NGH7 325 aa10.59□□□□□ -0.71
NUDCD1-201ENST00000239690 RGS16O15492 202 aaPredicted RBP10.59□□□□□ -0.71
NUDCD1-201ENST00000239690 HEXIM1O94992 359 aaKnown RBP10.59□□□□□ -0.71
NUDCD1-201ENST00000239690 DAAM2Q86T65 1068 aa10.59□□□□□ -0.71
NUDCD1-201ENST00000239690 ALDH8A1Q9H2A2 487 aaPredicted RBP10.59□□□□□ -0.71
NUDCD1-201ENST00000239690 RNMTO43148 476 aaKnown RBP10.58□□□□□ -0.72
NUDCD1-201ENST00000239690 USP14P54578 494 aa10.58□□□□□ -0.72
NUDCD1-201ENST00000239690 NBPF9Q3BBW0 867 aa10.58□□□□□ -0.72
NUDCD1-201ENST00000239690 TRIM68Q6AZZ1 485 aa10.58□□□□□ -0.72
NUDCD1-201ENST00000239690 NUCKS1Q9H1E3 243 aaKnown RBP10.58□□□□□ -0.72
NUDCD1-201ENST00000239690 EPB41L5Q9HCM4 733 aa10.58□□□□□ -0.72
NUDCD1-201ENST00000239690 KDRP35968 1356 aa10.58□□□□□ -0.72
NUDCD1-201ENST00000239690 E9PCH4 1651 aa10.58□□□□□ -0.72
NUDCD1-201ENST00000239690 SAMD9LQ8IVG5 1584 aa10.58□□□□□ -0.72
NUDCD1-201ENST00000239690 TRAF5O00463 557 aa10.58□□□□□ -0.72
NUDCD1-201ENST00000239690 CYP7A1P22680 504 aa10.58□□□□□ -0.72
NUDCD1-201ENST00000239690 PPP2R5BQ15173 497 aa10.58□□□□□ -0.72
NUDCD1-201ENST00000239690 DENND2CQ68D51 928 aa10.58□□□□□ -0.72
NUDCD1-201ENST00000239690 RBM43Q6ZSC3 357 aaKnown RBP10.58□□□□□ -0.72
NUDCD1-201ENST00000239690 PIK3AP1Q6ZUJ8 805 aa10.58□□□□□ -0.72
NUDCD1-201ENST00000239690 LGR6Q9HBX8 967 aa10.58□□□□□ -0.72
NUDCD1-201ENST00000239690 DNAJC5BQ9UF47 199 aa10.58□□□□□ -0.72
NUDCD1-201ENST00000239690 DBNLQ9UJU6 430 aaKnown RBP10.58□□□□□ -0.72
NUDCD1-201ENST00000239690 V9GY48 417 aaPredicted RBP10.58□□□□□ -0.72
NUDCD1-201ENST00000239690 ATP10DQ9P241 1426 aa10.58□□□□□ -0.72
NUDCD1-201ENST00000239690 PBRM1Q86U86 1689 aa10.58□□□□□ -0.72
NUDCD1-201ENST00000239690 HMGB1P1B2RPK0 211 aaPredicted RBP10.58□□□□□ -0.72
NUDCD1-201ENST00000239690 GTPBP6O43824 516 aaPredicted RBP10.58□□□□□ -0.72
NUDCD1-201ENST00000239690 POTEJP0CG39 1038 aa10.58□□□□□ -0.72
NUDCD1-201ENST00000239690 GPTP24298 496 aa10.58□□□□□ -0.72
NUDCD1-201ENST00000239690 ACTN3Q08043 901 aaPredicted RBP10.58□□□□□ -0.72
NUDCD1-201ENST00000239690 SLMAPQ14BN4 828 aa10.58□□□□□ -0.72
NUDCD1-201ENST00000239690 WDR66Q8TBY9 1149 aa10.58□□□□□ -0.72
NUDCD1-201ENST00000239690 IRX2Q9BZI1 471 aaPredicted RBP10.58□□□□□ -0.72
NUDCD1-201ENST00000239690 HOMER3Q9NSC5 361 aa10.58□□□□□ -0.72
NUDCD1-201ENST00000239690 MTUS1Q9ULD2 1270 aa10.58□□□□□ -0.72
NUDCD1-201ENST00000239690 ATP7AQ04656 1500 aa10.58□□□□□ -0.72
NUDCD1-201ENST00000239690 FGAP02671 866 aa10.57□□□□□ -0.72
NUDCD1-201ENST00000239690 TOM1L2Q6ZVM7 507 aa10.57□□□□□ -0.72
NUDCD1-201ENST00000239690 HEATR3Q7Z4Q2 680 aa10.57□□□□□ -0.72
NUDCD1-201ENST00000239690 GPIHBP1Q8IV16 184 aa10.57□□□□□ -0.72
NUDCD1-201ENST00000239690 DPF2Q92785 391 aa10.57□□□□□ -0.72
NUDCD1-201ENST00000239690 RAB17Q9H0T7 212 aa10.57□□□□□ -0.72
NUDCD1-201ENST00000239690 MEFVO15553 781 aaPredicted RBP10.57□□□□□ -0.72
NUDCD1-201ENST00000239690 SETSIPP0DME0 302 aa10.57□□□□□ -0.72
NUDCD1-201ENST00000239690 ELF1P32519 619 aa10.57□□□□□ -0.72
NUDCD1-201ENST00000239690 KRT79Q5XKE5 535 aa10.57□□□□□ -0.72
NUDCD1-201ENST00000239690 SAAL1Q96ER3 474 aa10.57□□□□□ -0.72
NUDCD1-201ENST00000239690 MBD4O95243 580 aa10.57□□□□□ -0.72
NUDCD1-201ENST00000239690 GRAMD1CQ8IYS0 662 aa10.57□□□□□ -0.72
NUDCD1-201ENST00000239690 ANKRD13CQ8N6S4 541 aa10.57□□□□□ -0.72
NUDCD1-201ENST00000239690 RETREG2Q8NC44 543 aa10.57□□□□□ -0.72
NUDCD1-201ENST00000239690 SMC6Q96SB8 1091 aa10.57□□□□□ -0.72
NUDCD1-201ENST00000239690 COPRSQ9NQ92 184 aa10.57□□□□□ -0.72
NUDCD1-201ENST00000239690 KLC4Q9NSK0 619 aa10.57□□□□□ -0.72
NUDCD1-201ENST00000239690 RNF14Q9UBS8 474 aa10.57□□□□□ -0.72
NUDCD1-201ENST00000239690 SMIM24O75264 130 aa10.57□□□□□ -0.72
NUDCD1-201ENST00000239690 KLHL30Q0D2K2 578 aa10.57□□□□□ -0.72
NUDCD1-201ENST00000239690 ASIC2Q16515 512 aa10.57□□□□□ -0.72
NUDCD1-201ENST00000239690 ZMYM1Q5SVZ6 1142 aa10.57□□□□□ -0.72
NUDCD1-201ENST00000239690 SV2BQ7L1I2 683 aa10.57□□□□□ -0.72
NUDCD1-201ENST00000239690 OSCARQ8IYS5 282 aa10.57□□□□□ -0.72
NUDCD1-201ENST00000239690 RAB3IPQ96QF0 476 aaPredicted RBP10.57□□□□□ -0.72
NUDCD1-201ENST00000239690 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.57□□□□□ -0.72
NUDCD1-201ENST00000239690 ADCY10Q96PN6 1610 aa10.56□□□□□ -0.72
NUDCD1-201ENST00000239690 KCNK3O14649 394 aa10.56□□□□□ -0.72
NUDCD1-201ENST00000239690 SEMA3EO15041 775 aa10.56□□□□□ -0.72
NUDCD1-201ENST00000239690 ATF3P18847 181 aa10.56□□□□□ -0.72
NUDCD1-201ENST00000239690 EEF1GP26641 437 aaKnown RBP10.56□□□□□ -0.72
NUDCD1-201ENST00000239690 SFMBT2Q5VUG0 894 aa10.56□□□□□ -0.72
NUDCD1-201ENST00000239690 PEX26Q7Z412 305 aa10.56□□□□□ -0.72
NUDCD1-201ENST00000239690 SPATA24Q86W54 205 aa10.56□□□□□ -0.72
NUDCD1-201ENST00000239690 SMYD4Q8IYR2 804 aaPredicted RBP10.56□□□□□ -0.72
NUDCD1-201ENST00000239690 MAGEB6Q8N7X4 407 aa10.56□□□□□ -0.72
NUDCD1-201ENST00000239690 XAGE2Q96GT9 111 aa10.56□□□□□ -0.72
NUDCD1-201ENST00000239690 KRT12Q99456 494 aa10.56□□□□□ -0.72
NUDCD1-201ENST00000239690 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.56□□□□□ -0.72
NUDCD1-201ENST00000239690 CDK12Q9NYV4 1490 aaPredicted RBP10.56□□□□□ -0.72
NUDCD1-201ENST00000239690 IQGAP3Q86VI3 1631 aa10.56□□□□□ -0.72
NUDCD1-201ENST00000239690 CFAP65Q6ZU64 1925 aaKnown RBP10.56□□□□□ -0.72
NUDCD1-201ENST00000239690 BUB1O43683 1085 aa10.56□□□□□ -0.72
NUDCD1-201ENST00000239690 HNRNPH1P31943 449 aaKnown RBP10.56□□□□□ -0.72
NUDCD1-201ENST00000239690 ZNF76P36508 570 aa10.56□□□□□ -0.72
NUDCD1-201ENST00000239690 SAMD1Q6SPF0 538 aaPredicted RBP10.56□□□□□ -0.72
NUDCD1-201ENST00000239690 ARMC2Q8NEN0 867 aa10.56□□□□□ -0.72
NUDCD1-201ENST00000239690 WHAMMQ8TF30 809 aa10.56□□□□□ -0.72
NUDCD1-201ENST00000239690 STAG1Q8WVM7 1258 aa10.56□□□□□ -0.72
NUDCD1-201ENST00000239690 CSRNP2Q9H175 543 aa10.56□□□□□ -0.72
NUDCD1-201ENST00000239690 NLRC4Q9NPP4 1024 aa10.56□□□□□ -0.72
NUDCD1-201ENST00000239690 VPS54Q9P1Q0 977 aa10.56□□□□□ -0.72
NUDCD1-201ENST00000239690 KLHL14Q9P2G3 628 aa10.56□□□□□ -0.72
NUDCD1-201ENST00000239690 POGZQ7Z3K3 1410 aa10.56□□□□□ -0.72
NUDCD1-201ENST00000239690 ANO9A1A5B4 782 aa10.56□□□□□ -0.72
NUDCD1-201ENST00000239690 NEURL1BA8MQ27 555 aa10.56□□□□□ -0.72
NUDCD1-201ENST00000239690 ARID4AP29374 1257 aaPredicted RBP10.56□□□□□ -0.72
NUDCD1-201ENST00000239690 RASSF2P50749 326 aa10.56□□□□□ -0.72
NUDCD1-201ENST00000239690 MTF1Q14872 753 aa10.56□□□□□ -0.72
NUDCD1-201ENST00000239690 RESP18Q5W5W9 173 aa10.56□□□□□ -0.72
NUDCD1-201ENST00000239690 CCHCR1Q8TD31 782 aa10.56□□□□□ -0.72
NUDCD1-201ENST00000239690 VAT1LQ9HCJ6 419 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms