RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 CTIFO43310 598 aaKnown RBP18.47■□□□□ 0.55
UBE3D-201ENST00000237186 BBOX1O75936 387 aa18.47■□□□□ 0.55
UBE3D-201ENST00000237186 SLFN14P0C7P3 912 aa18.47■□□□□ 0.55
UBE3D-201ENST00000237186 PRR29P0C7W0 189 aa18.47■□□□□ 0.55
UBE3D-201ENST00000237186 HOXA10P31260 410 aaPredicted RBP18.47■□□□□ 0.55
UBE3D-201ENST00000237186 GNAQP50148 359 aa18.47■□□□□ 0.55
UBE3D-201ENST00000237186 UBASH3AP57075 661 aa18.47■□□□□ 0.55
UBE3D-201ENST00000237186 GPSM2P81274 684 aa18.47■□□□□ 0.55
UBE3D-201ENST00000237186 GRIK5Q16478 980 aa18.47■□□□□ 0.55
UBE3D-201ENST00000237186 TTC38Q5R3I4 469 aa18.47■□□□□ 0.55
UBE3D-201ENST00000237186 ARMCX5Q6P1M9 558 aa18.47■□□□□ 0.55
UBE3D-201ENST00000237186 AMOTL1Q8IY63 956 aa18.47■□□□□ 0.55
UBE3D-201ENST00000237186 RPGRQ92834 1020 aaKnown RBP18.47■□□□□ 0.55
UBE3D-201ENST00000237186 C16orf45Q96MC5 204 aaPredicted RBP18.47■□□□□ 0.55
UBE3D-201ENST00000237186 CD209Q9NNX6 404 aa18.47■□□□□ 0.55
UBE3D-201ENST00000237186 FANCLQ9NW38 375 aa18.47■□□□□ 0.55
UBE3D-201ENST00000237186 PODXL2Q9NZ53 605 aa18.47■□□□□ 0.55
UBE3D-201ENST00000237186 EP400Q96L91 3159 aa18.46■□□□□ 0.55
UBE3D-201ENST00000237186 SFPQP23246 707 aaKnown RBP eCLIP18.46■□□□□ 0.55
UBE3D-201ENST00000237186 CALML3P27482 149 aa18.46■□□□□ 0.55
UBE3D-201ENST00000237186 ERCC5P28715 1186 aaPredicted RBP18.46■□□□□ 0.55
UBE3D-201ENST00000237186 FAM177A1Q8N128 213 aaPredicted RBP18.46■□□□□ 0.55
UBE3D-201ENST00000237186 CCAR2Q8N163 923 aaKnown RBP18.46■□□□□ 0.55
UBE3D-201ENST00000237186 FAM163AQ96GL9 167 aaPredicted RBP18.46■□□□□ 0.55
UBE3D-201ENST00000237186 RTFDC1Q9BY42 306 aaPredicted RBP18.46■□□□□ 0.55
UBE3D-201ENST00000237186 LAMB1P07942 1786 aa18.46■□□□□ 0.55
UBE3D-201ENST00000237186 GPR75-ASB3A0A0A6YYF3 556 aa18.46■□□□□ 0.54
UBE3D-201ENST00000237186 WNT7AO00755 349 aa18.46■□□□□ 0.54
UBE3D-201ENST00000237186 SERPINB2P05120 415 aa18.46■□□□□ 0.54
UBE3D-201ENST00000237186 ZNF18P17022 549 aa18.46■□□□□ 0.54
UBE3D-201ENST00000237186 NLRP5P59047 1200 aa18.46■□□□□ 0.54
UBE3D-201ENST00000237186 ST5P78524 1137 aa18.46■□□□□ 0.54
UBE3D-201ENST00000237186 RBM10P98175 930 aaKnown RBP18.46■□□□□ 0.54
UBE3D-201ENST00000237186 GRM4Q14833 912 aa18.46■□□□□ 0.54
UBE3D-201ENST00000237186 DIXDC1Q155Q3 683 aa18.46■□□□□ 0.54
UBE3D-201ENST00000237186 PNMA1Q8ND90 353 aa18.46■□□□□ 0.54
UBE3D-201ENST00000237186 RBM17Q96I25 401 aaKnown RBP18.46■□□□□ 0.54
UBE3D-201ENST00000237186 MYH13Q9UKX3 1938 aa18.45■□□□□ 0.54
UBE3D-201ENST00000237186 KLRG2A4D1S0 409 aaPredicted RBP18.45■□□□□ 0.54
UBE3D-201ENST00000237186 SERPINC1P01008 464 aa18.45■□□□□ 0.54
UBE3D-201ENST00000237186 SLC51AQ86UW1 340 aa18.45■□□□□ 0.54
UBE3D-201ENST00000237186 VSTM4Q8IW00 320 aa18.45■□□□□ 0.54
UBE3D-201ENST00000237186 PDILTQ8N807 584 aa18.45■□□□□ 0.54
UBE3D-201ENST00000237186 DYNLL2Q96FJ2 89 aa18.45■□□□□ 0.54
UBE3D-201ENST00000237186 EPSTI1Q96J88 318 aa18.45■□□□□ 0.54
UBE3D-201ENST00000237186 MKNK2Q9HBH9 465 aa18.45■□□□□ 0.54
UBE3D-201ENST00000237186 ZNF287Q9HBT7 754 aa18.45■□□□□ 0.54
UBE3D-201ENST00000237186 A0A087X0B3 334 aa18.44■□□□□ 0.54
UBE3D-201ENST00000237186 PSDA5PKW4 1024 aaPredicted RBP18.44■□□□□ 0.54
UBE3D-201ENST00000237186 PTGDRQ13258 359 aa18.44■□□□□ 0.54
UBE3D-201ENST00000237186 ZNF174Q15697 407 aa18.44■□□□□ 0.54
UBE3D-201ENST00000237186 NOM1Q5C9Z4 860 aaKnown RBP18.44■□□□□ 0.54
UBE3D-201ENST00000237186 TGFBRAP1Q8WUH2 860 aa18.44■□□□□ 0.54
UBE3D-201ENST00000237186 DPF2Q92785 391 aa18.44■□□□□ 0.54
UBE3D-201ENST00000237186 SYMPKQ92797 1274 aaKnown RBP18.44■□□□□ 0.54
UBE3D-201ENST00000237186 PYM1Q9BRP8 204 aaKnown RBP18.44■□□□□ 0.54
UBE3D-201ENST00000237186 MAD2L2Q9UI95 211 aa18.44■□□□□ 0.54
UBE3D-201ENST00000237186 GGA1Q9UJY5 639 aa18.44■□□□□ 0.54
UBE3D-201ENST00000237186 CCDC88AQ3V6T2 1871 aa18.44■□□□□ 0.54
UBE3D-201ENST00000237186 USP27XA6NNY8 438 aa18.43■□□□□ 0.54
UBE3D-201ENST00000237186 KIF2AO00139 706 aaPredicted RBP18.43■□□□□ 0.54
UBE3D-201ENST00000237186 NRDCO43847 1150 aa18.43■□□□□ 0.54
UBE3D-201ENST00000237186 VEGFAP15692 232 aaPredicted RBP18.43■□□□□ 0.54
UBE3D-201ENST00000237186 PTPN14Q15678 1187 aa18.43■□□□□ 0.54
UBE3D-201ENST00000237186 ARL6IP4Q66PJ3 421 aaKnown RBP18.43■□□□□ 0.54
UBE3D-201ENST00000237186 ZNF444Q8N0Y2 327 aaPredicted RBP18.43■□□□□ 0.54
UBE3D-201ENST00000237186 PAGE5Q96GU1 130 aa18.43■□□□□ 0.54
UBE3D-201ENST00000237186 CRAMP1Q96RY5 1269 aa18.43■□□□□ 0.54
UBE3D-201ENST00000237186 UFL1O94874 794 aa18.43■□□□□ 0.54
UBE3D-201ENST00000237186 PLCD1P51178 756 aa18.43■□□□□ 0.54
UBE3D-201ENST00000237186 FMR1Q06787 632 aaKnown RBP eCLIP18.43■□□□□ 0.54
UBE3D-201ENST00000237186 CEP135Q66GS9 1140 aa18.43■□□□□ 0.54
UBE3D-201ENST00000237186 GALNT17Q6IS24 598 aa18.43■□□□□ 0.54
UBE3D-201ENST00000237186 GSDMAQ96QA5 445 aa18.43■□□□□ 0.54
UBE3D-201ENST00000237186 LZTS2Q9BRK4 669 aa18.43■□□□□ 0.54
UBE3D-201ENST00000237186 TMX1Q9H3N1 280 aa18.43■□□□□ 0.54
UBE3D-201ENST00000237186 TSPY3P0CV98 308 aa18.42■□□□□ 0.54
UBE3D-201ENST00000237186 TSPY8P0CW00 308 aa18.42■□□□□ 0.54
UBE3D-201ENST00000237186 PLCG2P16885 1265 aa18.42■□□□□ 0.54
UBE3D-201ENST00000237186 DPYDQ12882 1025 aa18.42■□□□□ 0.54
UBE3D-201ENST00000237186 SYCP1Q15431 976 aa18.42■□□□□ 0.54
UBE3D-201ENST00000237186 CFAP100Q494V2 611 aa18.42■□□□□ 0.54
UBE3D-201ENST00000237186 E4F1Q66K89 784 aaPredicted RBP18.42■□□□□ 0.54
UBE3D-201ENST00000237186 PIK3AP1Q6ZUJ8 805 aa18.42■□□□□ 0.54
UBE3D-201ENST00000237186 GRAMD1CQ8IYS0 662 aa18.42■□□□□ 0.54
UBE3D-201ENST00000237186 BLIDQ8IZY5 108 aa18.42■□□□□ 0.54
UBE3D-201ENST00000237186 STAG2Q8N3U4 1231 aa18.42■□□□□ 0.54
UBE3D-201ENST00000237186 DAGLBQ8NCG7 672 aa18.42■□□□□ 0.54
UBE3D-201ENST00000237186 CCDC112Q8NEF3 446 aa18.42■□□□□ 0.54
UBE3D-201ENST00000237186 DHX58Q96C10 678 aa18.42■□□□□ 0.54
UBE3D-201ENST00000237186 MED15Q96RN5 788 aa18.42■□□□□ 0.54
UBE3D-201ENST00000237186 PCDHA4Q9UN74 947 aa18.42■□□□□ 0.54
UBE3D-201ENST00000237186 PALM3A6NDB9 673 aaPredicted RBP18.41■□□□□ 0.54
UBE3D-201ENST00000237186 M0R2N6 131 aa18.41■□□□□ 0.54
UBE3D-201ENST00000237186 TUBB4AP04350 444 aa18.41■□□□□ 0.54
UBE3D-201ENST00000237186 RASA1P20936 1047 aa18.41■□□□□ 0.54
UBE3D-201ENST00000237186 BTDP43251 543 aa18.41■□□□□ 0.54
UBE3D-201ENST00000237186 E2F4Q16254 413 aa18.41■□□□□ 0.54
UBE3D-201ENST00000237186 C16orf86Q6ZW13 317 aa18.41■□□□□ 0.54
UBE3D-201ENST00000237186 TMC4Q7Z404 712 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms