RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 MTMR2Q13614 643 aa11.94□□□□□ -0.5
HMGCL-201ENST00000235958 WTAPQ15007 396 aa11.94□□□□□ -0.5
HMGCL-201ENST00000235958 ZYXQ15942 572 aaKnown RBP11.94□□□□□ -0.5
HMGCL-201ENST00000235958 KIAA1755Q5JYT7 1200 aa11.94□□□□□ -0.5
HMGCL-201ENST00000235958 IFIT1BQ5T764 474 aaKnown RBP11.94□□□□□ -0.5
HMGCL-201ENST00000235958 Q6ZUG5 572 aa11.94□□□□□ -0.5
HMGCL-201ENST00000235958 CAPNS2Q96L46 248 aa11.94□□□□□ -0.5
HMGCL-201ENST00000235958 KIAA1683Q9H0B3 1180 aa11.94□□□□□ -0.5
HMGCL-201ENST00000235958 LY9Q9HBG7 655 aa11.94□□□□□ -0.5
HMGCL-201ENST00000235958 EMILIN3Q9NT22 766 aa11.94□□□□□ -0.5
HMGCL-201ENST00000235958 PDRG1Q9NUG6 133 aa11.94□□□□□ -0.5
HMGCL-201ENST00000235958 SH2B2O14492 632 aaPredicted RBP11.93□□□□□ -0.5
HMGCL-201ENST00000235958 GTF2A2P52657 109 aa11.93□□□□□ -0.5
HMGCL-201ENST00000235958 USP14P54578 494 aa11.93□□□□□ -0.5
HMGCL-201ENST00000235958 HMGCS2P54868 508 aa11.93□□□□□ -0.5
HMGCL-201ENST00000235958 SNAPC2Q13487 334 aa11.93□□□□□ -0.5
HMGCL-201ENST00000235958 SH3D19Q5HYK7 790 aa11.93□□□□□ -0.5
HMGCL-201ENST00000235958 USP17L2Q6R6M4 530 aa11.93□□□□□ -0.5
HMGCL-201ENST00000235958 LRRC47Q8N1G4 583 aaKnown RBP11.93□□□□□ -0.5
HMGCL-201ENST00000235958 FBXL16Q8N461 479 aa11.93□□□□□ -0.5
HMGCL-201ENST00000235958 CHMP4CQ96CF2 233 aa11.93□□□□□ -0.5
HMGCL-201ENST00000235958 ZIC5Q96T25 663 aa11.93□□□□□ -0.5
HMGCL-201ENST00000235958 FEZ1Q99689 392 aa11.93□□□□□ -0.5
HMGCL-201ENST00000235958 ALDH8A1Q9H2A2 487 aaPredicted RBP11.93□□□□□ -0.5
HMGCL-201ENST00000235958 SH2D4AQ9H788 454 aa11.93□□□□□ -0.5
HMGCL-201ENST00000235958 A0A0G2JLL6 359 aaPredicted RBP11.92□□□□□ -0.5
HMGCL-201ENST00000235958 RAD21O60216 631 aa11.92□□□□□ -0.5
HMGCL-201ENST00000235958 CETPP11597 493 aa11.92□□□□□ -0.5
HMGCL-201ENST00000235958 VEGFBP49765 207 aa11.92□□□□□ -0.5
HMGCL-201ENST00000235958 INHBEP58166 350 aa11.92□□□□□ -0.5
HMGCL-201ENST00000235958 DGKZQ13574 1117 aa11.92□□□□□ -0.5
HMGCL-201ENST00000235958 SLFN13Q68D06 897 aa11.92□□□□□ -0.5
HMGCL-201ENST00000235958 NFXL1Q6ZNB6 911 aa11.92□□□□□ -0.5
HMGCL-201ENST00000235958 FASTKD5Q7L8L6 764 aaKnown RBP11.92□□□□□ -0.5
HMGCL-201ENST00000235958 PRRT2Q7Z6L0 340 aaPredicted RBP11.92□□□□□ -0.5
HMGCL-201ENST00000235958 SPICE1Q8N0Z3 855 aa11.92□□□□□ -0.5
HMGCL-201ENST00000235958 PNMA1Q8ND90 353 aa11.92□□□□□ -0.5
HMGCL-201ENST00000235958 LARP6Q9BRS8 491 aaKnown RBP11.92□□□□□ -0.5
HMGCL-201ENST00000235958 AGXT2Q9BYV1 514 aa11.92□□□□□ -0.5
HMGCL-201ENST00000235958 VCPKMTQ9H867 229 aa11.92□□□□□ -0.5
HMGCL-201ENST00000235958 KAT14Q9H8E8 782 aa11.92□□□□□ -0.5
HMGCL-201ENST00000235958 GOPCQ9HD26 462 aa11.92□□□□□ -0.5
HMGCL-201ENST00000235958 TMOD4Q9NZQ9 345 aa11.92□□□□□ -0.5
HMGCL-201ENST00000235958 SYNPO2Q9UMS6 1093 aa11.92□□□□□ -0.5
HMGCL-201ENST00000235958 MTMR7Q9Y216 660 aa11.92□□□□□ -0.5
HMGCL-201ENST00000235958 WDR33Q9C0J8 1336 aaKnown RBP11.91□□□□□ -0.5
HMGCL-201ENST00000235958 CCL15-CCL14A0A0B4J2E2 113 aa11.91□□□□□ -0.5
HMGCL-201ENST00000235958 TESPA1A2RU30 521 aaPredicted RBP11.91□□□□□ -0.5
HMGCL-201ENST00000235958 MANSC4A6NHS7 340 aaPredicted RBP11.91□□□□□ -0.5
HMGCL-201ENST00000235958 CCDC69A6NI79 296 aa11.91□□□□□ -0.5
HMGCL-201ENST00000235958 AOC2O75106 756 aa11.91□□□□□ -0.5
HMGCL-201ENST00000235958 NDUFB10O96000 172 aa11.91□□□□□ -0.5
HMGCL-201ENST00000235958 KIF23Q02241 960 aaPredicted RBP11.91□□□□□ -0.5
HMGCL-201ENST00000235958 NOGQ13253 232 aa11.91□□□□□ -0.5
HMGCL-201ENST00000235958 MOGSQ13724 837 aa11.91□□□□□ -0.5
HMGCL-201ENST00000235958 TOB2Q14106 344 aaPredicted RBP11.91□□□□□ -0.5
HMGCL-201ENST00000235958 RABEP1Q15276 862 aa11.91□□□□□ -0.5
HMGCL-201ENST00000235958 CCL15Q16663 113 aa11.91□□□□□ -0.5
HMGCL-201ENST00000235958 GADL1Q6ZQY3 521 aa11.91□□□□□ -0.5
HMGCL-201ENST00000235958 CATIPQ7Z7H3 387 aa11.91□□□□□ -0.5
HMGCL-201ENST00000235958 SGMS1Q86VZ5 419 aa11.91□□□□□ -0.5
HMGCL-201ENST00000235958 GMCL1P1Q8NEA9 526 aa11.91□□□□□ -0.5
HMGCL-201ENST00000235958 BRI3BPQ8WY22 251 aa11.91□□□□□ -0.5
HMGCL-201ENST00000235958 LPAR1Q92633 364 aa11.91□□□□□ -0.5
HMGCL-201ENST00000235958 BRF1Q92994 677 aa11.91□□□□□ -0.5
HMGCL-201ENST00000235958 PTPN18Q99952 460 aa11.91□□□□□ -0.5
HMGCL-201ENST00000235958 BRPF3Q9ULD4 1205 aa11.91□□□□□ -0.5
HMGCL-201ENST00000235958 PTPRFP10586 1907 aa11.9□□□□□ -0.5
HMGCL-201ENST00000235958 MAP2K2P36507 400 aa11.9□□□□□ -0.5
HMGCL-201ENST00000235958 TM4SF4P48230 202 aa11.9□□□□□ -0.5
HMGCL-201ENST00000235958 EVCP57679 992 aa11.9□□□□□ -0.5
HMGCL-201ENST00000235958 APOBRQ0VD83 1088 aa11.9□□□□□ -0.5
HMGCL-201ENST00000235958 TROAPQ12815 778 aa11.9□□□□□ -0.5
HMGCL-201ENST00000235958 GPAT2Q6NUI2 795 aa11.9□□□□□ -0.5
HMGCL-201ENST00000235958 SYNE3Q6ZMZ3 975 aa11.9□□□□□ -0.5
HMGCL-201ENST00000235958 ZNF654Q8IZM8 581 aa11.9□□□□□ -0.5
HMGCL-201ENST00000235958 DNAJC5GQ8N7S2 189 aa11.9□□□□□ -0.5
HMGCL-201ENST00000235958 PROCA1Q8NCQ7 364 aaPredicted RBP11.9□□□□□ -0.5
HMGCL-201ENST00000235958 C12orf42Q96LP6 360 aa11.9□□□□□ -0.5
HMGCL-201ENST00000235958 NUP88Q99567 741 aaPredicted RBP11.9□□□□□ -0.5
HMGCL-201ENST00000235958 SLC12A7Q9Y666 1083 aa11.9□□□□□ -0.5
HMGCL-201ENST00000235958 BAZ2BQ9UIF8 2168 aaKnown RBP11.89□□□□□ -0.51
HMGCL-201ENST00000235958 KLF18A0A0U1RQI7 1052 aa11.89□□□□□ -0.51
HMGCL-201ENST00000235958 BTBD19C9JJ37 291 aa11.89□□□□□ -0.51
HMGCL-201ENST00000235958 PDHBP11177 359 aa11.89□□□□□ -0.51
HMGCL-201ENST00000235958 BMP3P12645 472 aa11.89□□□□□ -0.51
HMGCL-201ENST00000235958 SLC1A4P43007 532 aa11.89□□□□□ -0.51
HMGCL-201ENST00000235958 AK2P54819 239 aa11.89□□□□□ -0.51
HMGCL-201ENST00000235958 TREML2Q5T2D2 321 aa11.89□□□□□ -0.51
HMGCL-201ENST00000235958 IL27Q8NEV9 243 aa11.89□□□□□ -0.51
HMGCL-201ENST00000235958 NUP133Q8WUM0 1156 aa11.89□□□□□ -0.51
HMGCL-201ENST00000235958 GMCL1Q96IK5 515 aa11.89□□□□□ -0.51
HMGCL-201ENST00000235958 MYL10Q9BUA6 226 aa11.89□□□□□ -0.51
HMGCL-201ENST00000235958 RPAP3Q9H6T3 665 aaPredicted RBP11.89□□□□□ -0.51
HMGCL-201ENST00000235958 NAP1L2Q9ULW6 460 aaPredicted RBP11.89□□□□□ -0.51
HMGCL-201ENST00000235958 USP17L15C9J2P7 530 aa11.88□□□□□ -0.51
HMGCL-201ENST00000235958 USP17L13C9JLJ4 530 aa11.88□□□□□ -0.51
HMGCL-201ENST00000235958 USP17L11C9JVI0 530 aa11.88□□□□□ -0.51
HMGCL-201ENST00000235958 USP17L18D6R9N7 530 aa11.88□□□□□ -0.51
HMGCL-201ENST00000235958 USP17L22D6RA61 530 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms