RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 DACH1Q9UI36 760 aa12.97□□□□□ -0.33
CCND1-201ENST00000227507 ZNF804BA4D1E1 1349 aa12.97□□□□□ -0.33
CCND1-201ENST00000227507 CCT5P48643 541 aa12.97□□□□□ -0.33
CCND1-201ENST00000227507 TNNI2P48788 182 aa12.97□□□□□ -0.33
CCND1-201ENST00000227507 LEMD3Q9Y2U8 911 aa12.97□□□□□ -0.33
CCND1-201ENST00000227507 EBAG9O00559 213 aa12.97□□□□□ -0.33
CCND1-201ENST00000227507 ENC1O14682 589 aa12.97□□□□□ -0.33
CCND1-201ENST00000227507 STX10O60499 249 aa12.97□□□□□ -0.33
CCND1-201ENST00000227507 WTAPQ15007 396 aa12.97□□□□□ -0.33
CCND1-201ENST00000227507 GPR162Q16538 588 aa12.97□□□□□ -0.33
CCND1-201ENST00000227507 SMARCC2Q8TAQ2 1214 aa12.97□□□□□ -0.33
CCND1-201ENST00000227507 STAMQ92783 540 aa12.97□□□□□ -0.33
CCND1-201ENST00000227507 SLF1Q9BQI6 1058 aa12.97□□□□□ -0.33
CCND1-201ENST00000227507 N4BP3O15049 544 aa12.96□□□□□ -0.33
CCND1-201ENST00000227507 KIAA0754O94854 1291 aa12.96□□□□□ -0.33
CCND1-201ENST00000227507 METAP2P50579 478 aaKnown RBP eCLIP12.96□□□□□ -0.33
CCND1-201ENST00000227507 GTF2IP78347 998 aa12.96□□□□□ -0.33
CCND1-201ENST00000227507 TRIM28Q13263 835 aaKnown RBP12.96□□□□□ -0.33
CCND1-201ENST00000227507 CCDC70Q6NSX1 233 aa12.96□□□□□ -0.33
CCND1-201ENST00000227507 EGFL6Q8IUX8 553 aa12.96□□□□□ -0.33
CCND1-201ENST00000227507 RIN2Q8WYP3 895 aaPredicted RBP12.96□□□□□ -0.33
CCND1-201ENST00000227507 KCNB2Q92953 911 aa12.96□□□□□ -0.33
CCND1-201ENST00000227507 ISCA1Q9BUE6 129 aa12.96□□□□□ -0.33
CCND1-201ENST00000227507 SLC26A6Q9BXS9 759 aa12.96□□□□□ -0.33
CCND1-201ENST00000227507 MRPL44Q9H9J2 332 aaKnown RBP12.96□□□□□ -0.33
CCND1-201ENST00000227507 GPR108Q9NPR9 543 aa12.96□□□□□ -0.33
CCND1-201ENST00000227507 CDC23Q9UJX2 597 aa12.96□□□□□ -0.33
CCND1-201ENST00000227507 NF2P35240 595 aa12.96□□□□□ -0.33
CCND1-201ENST00000227507 RDXP35241 583 aaKnown RBP12.96□□□□□ -0.33
CCND1-201ENST00000227507 DNA2P51530 1060 aa12.96□□□□□ -0.33
CCND1-201ENST00000227507 NCAPHQ15003 741 aa12.96□□□□□ -0.33
CCND1-201ENST00000227507 BRAPQ7Z569 592 aa12.96□□□□□ -0.33
CCND1-201ENST00000227507 TMTC2Q8N394 836 aa12.96□□□□□ -0.33
CCND1-201ENST00000227507 SHTN1A0MZ66 631 aa12.96□□□□□ -0.34
CCND1-201ENST00000227507 IKBKBO14920 756 aa12.96□□□□□ -0.34
CCND1-201ENST00000227507 RNF40O75150 1001 aa12.96□□□□□ -0.34
CCND1-201ENST00000227507 VSNL1P62760 191 aa12.96□□□□□ -0.34
CCND1-201ENST00000227507 SEMA3FQ13275 785 aa12.96□□□□□ -0.34
CCND1-201ENST00000227507 MFSD14BQ5SR56 506 aa12.96□□□□□ -0.34
CCND1-201ENST00000227507 RNF187Q5TA31 235 aaPredicted RBP12.96□□□□□ -0.34
CCND1-201ENST00000227507 TBC1D9BQ66K14 1250 aa12.96□□□□□ -0.34
CCND1-201ENST00000227507 NCAPH2Q6IBW4 605 aa12.96□□□□□ -0.34
CCND1-201ENST00000227507 PACS2Q86VP3 889 aa12.96□□□□□ -0.34
CCND1-201ENST00000227507 ACRBPQ8NEB7 543 aa12.96□□□□□ -0.34
CCND1-201ENST00000227507 ANKRD20A12PQ8NF67 263 aa12.96□□□□□ -0.34
CCND1-201ENST00000227507 HSPD1P10809 573 aaKnown RBP12.95□□□□□ -0.34
CCND1-201ENST00000227507 NPR1P16066 1061 aa12.95□□□□□ -0.34
CCND1-201ENST00000227507 EPHA10Q5JZY3 1008 aa12.95□□□□□ -0.34
CCND1-201ENST00000227507 PNKPQ96T60 521 aa12.95□□□□□ -0.34
CCND1-201ENST00000227507 ZEB2O60315 1214 aa12.95□□□□□ -0.34
CCND1-201ENST00000227507 CUTAO60888 179 aa12.95□□□□□ -0.34
CCND1-201ENST00000227507 KCNA4P22459 653 aa12.95□□□□□ -0.34
CCND1-201ENST00000227507 IARSP41252 1262 aaKnown RBP12.95□□□□□ -0.34
CCND1-201ENST00000227507 GPIHBP1Q8IV16 184 aa12.95□□□□□ -0.34
CCND1-201ENST00000227507 ERLIN2O94905 339 aa12.95□□□□□ -0.34
CCND1-201ENST00000227507 BCAMP50895 628 aa12.95□□□□□ -0.34
CCND1-201ENST00000227507 PTPN12Q05209 780 aaKnown RBP12.95□□□□□ -0.34
CCND1-201ENST00000227507 KIAA1328Q86T90 577 aa12.95□□□□□ -0.34
CCND1-201ENST00000227507 MKRN1Q9UHC7 482 aaKnown RBP12.95□□□□□ -0.34
CCND1-201ENST00000227507 KIF28PB7ZC32 967 aa12.94□□□□□ -0.34
CCND1-201ENST00000227507 GPAA1O43292 621 aa12.94□□□□□ -0.34
CCND1-201ENST00000227507 ITPK1Q13572 414 aa12.94□□□□□ -0.34
CCND1-201ENST00000227507 GRAPQ13588 217 aa12.94□□□□□ -0.34
CCND1-201ENST00000227507 CC2D2BQ6DHV5 1058 aa12.94□□□□□ -0.34
CCND1-201ENST00000227507 GRAPLQ8TC17 118 aaPredicted RBP12.94□□□□□ -0.34
CCND1-201ENST00000227507 NAPGQ99747 312 aaPredicted RBP12.94□□□□□ -0.34
CCND1-201ENST00000227507 VPS16Q9H269 839 aa12.94□□□□□ -0.34
CCND1-201ENST00000227507 JADE2Q9NQC1 790 aa12.94□□□□□ -0.34
CCND1-201ENST00000227507 FMN2Q9NZ56 1722 aa12.94□□□□□ -0.34
CCND1-201ENST00000227507 A0A0U1RQJ8 604 aa12.94□□□□□ -0.34
CCND1-201ENST00000227507 NAP1L1P55209 391 aaKnown RBP12.94□□□□□ -0.34
CCND1-201ENST00000227507 MRPS25P82663 173 aaKnown RBP12.94□□□□□ -0.34
CCND1-201ENST00000227507 KRT40Q6A162 431 aa12.94□□□□□ -0.34
CCND1-201ENST00000227507 ATRIPQ8WXE1 791 aa12.94□□□□□ -0.34
CCND1-201ENST00000227507 MAPK8IP1Q9UQF2 711 aa12.94□□□□□ -0.34
CCND1-201ENST00000227507 LINC00116Q8NCU8 138 aa12.94□□□□□ -0.34
CCND1-201ENST00000227507 SERTAD1Q9UHV2 236 aa12.94□□□□□ -0.34
CCND1-201ENST00000227507 SAMM50Q9Y512 469 aa12.94□□□□□ -0.34
CCND1-201ENST00000227507 CDHR2Q9BYE9 1310 aa12.94□□□□□ -0.34
CCND1-201ENST00000227507 ZBTB7AO95365 584 aa12.94□□□□□ -0.34
CCND1-201ENST00000227507 MAP9Q49MG5 647 aa12.94□□□□□ -0.34
CCND1-201ENST00000227507 ILDR1Q86SU0 546 aaPredicted RBP12.94□□□□□ -0.34
CCND1-201ENST00000227507 CXorf56Q9H5V9 222 aa12.94□□□□□ -0.34
CCND1-201ENST00000227507 ARMT1Q9H993 441 aa12.94□□□□□ -0.34
CCND1-201ENST00000227507 POLR3EQ9NVU0 708 aa12.94□□□□□ -0.34
CCND1-201ENST00000227507 FDPSP14324 419 aaKnown RBP12.93□□□□□ -0.34
CCND1-201ENST00000227507 MAP2K2P36507 400 aa12.93□□□□□ -0.34
CCND1-201ENST00000227507 RBL2Q08999 1139 aa12.93□□□□□ -0.34
CCND1-201ENST00000227507 NFIXQ14938 502 aa12.93□□□□□ -0.34
CCND1-201ENST00000227507 IFIT1BQ5T764 474 aaKnown RBP12.93□□□□□ -0.34
CCND1-201ENST00000227507 ARHGAP27Q6ZUM4 889 aa12.93□□□□□ -0.34
CCND1-201ENST00000227507 GSPT2Q8IYD1 628 aaKnown RBP12.93□□□□□ -0.34
CCND1-201ENST00000227507 SMYD4Q8IYR2 804 aaPredicted RBP12.93□□□□□ -0.34
CCND1-201ENST00000227507 MASTLQ96GX5 879 aa12.93□□□□□ -0.34
CCND1-201ENST00000227507 CDK5RAP3Q96JB5 506 aa12.93□□□□□ -0.34
CCND1-201ENST00000227507 FANCGO15287 622 aa12.93□□□□□ -0.34
CCND1-201ENST00000227507 TEX33O43247 280 aa12.93□□□□□ -0.34
CCND1-201ENST00000227507 POLD4Q9HCU8 107 aa12.93□□□□□ -0.34
CCND1-201ENST00000227507 NRXN3Q9Y4C0 1643 aa12.93□□□□□ -0.34
CCND1-201ENST00000227507 USP42Q9H9J4 1324 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms