RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 MORN1Q5T089 497 aa21.58■■□□□ 1.05
PFN1-201ENST00000225655 PUS7LQ9H0K6 701 aaKnown RBP21.58■■□□□ 1.05
PFN1-201ENST00000225655 SLC4A4Q9Y6R1 1079 aa21.58■■□□□ 1.05
PFN1-201ENST00000225655 RGS2P41220 211 aa21.57■■□□□ 1.04
PFN1-201ENST00000225655 MAP3K21Q5TCX8 1036 aa21.57■■□□□ 1.04
PFN1-201ENST00000225655 CCDC17Q96LX7 622 aa21.57■■□□□ 1.04
PFN1-201ENST00000225655 SPDYE16A6NNV3 312 aaPredicted RBP21.56■■□□□ 1.04
PFN1-201ENST00000225655 AKR1B1P15121 316 aa21.56■■□□□ 1.04
PFN1-201ENST00000225655 CDK8P49336 464 aa21.56■■□□□ 1.04
PFN1-201ENST00000225655 C16orf86Q6ZW13 317 aa21.56■■□□□ 1.04
PFN1-201ENST00000225655 KBTBD3Q8NAB2 608 aa21.56■■□□□ 1.04
PFN1-201ENST00000225655 ANKLE1Q8NAG6 615 aa21.56■■□□□ 1.04
PFN1-201ENST00000225655 APBA2Q99767 749 aa21.56■■□□□ 1.04
PFN1-201ENST00000225655 STAP2Q9UGK3 403 aa21.56■■□□□ 1.04
PFN1-201ENST00000225655 RLFQ13129 1914 aa21.55■■□□□ 1.04
PFN1-201ENST00000225655 CYP2D7A0A087X1C5 515 aa21.55■■□□□ 1.04
PFN1-201ENST00000225655 SMIM22K7EJ46 135 aa21.55■■□□□ 1.04
PFN1-201ENST00000225655 PRKAR2AP13861 404 aaKnown RBP21.55■■□□□ 1.04
PFN1-201ENST00000225655 ZKSCAN1P17029 563 aaPredicted RBP21.55■■□□□ 1.04
PFN1-201ENST00000225655 PDE1AP54750 535 aa21.55■■□□□ 1.04
PFN1-201ENST00000225655 COG2Q14746 738 aa21.55■■□□□ 1.04
PFN1-201ENST00000225655 CTR9Q6PD62 1173 aa21.55■■□□□ 1.04
PFN1-201ENST00000225655 SIAH1Q8IUQ4 282 aa21.55■■□□□ 1.04
PFN1-201ENST00000225655 LPAR1Q92633 364 aa21.55■■□□□ 1.04
PFN1-201ENST00000225655 STRBPQ96SI9 672 aaKnown RBP21.55■■□□□ 1.04
PFN1-201ENST00000225655 SH2D4AQ9H788 454 aa21.55■■□□□ 1.04
PFN1-201ENST00000225655 ARHGEF10LQ9HCE6 1279 aa21.55■■□□□ 1.04
PFN1-201ENST00000225655 CWC22Q9HCG8 908 aaKnown RBP21.55■■□□□ 1.04
PFN1-201ENST00000225655 HOXC10Q9NYD6 342 aa21.55■■□□□ 1.04
PFN1-201ENST00000225655 BTBD7Q9P203 1132 aa21.55■■□□□ 1.04
PFN1-201ENST00000225655 COLQQ9Y215 455 aaPredicted RBP21.55■■□□□ 1.04
PFN1-201ENST00000225655 ICA1Q05084 483 aa21.54■■□□□ 1.04
PFN1-201ENST00000225655 MAP2K5Q13163 448 aa21.54■■□□□ 1.04
PFN1-201ENST00000225655 TSHZ3Q63HK5 1081 aa21.54■■□□□ 1.04
PFN1-201ENST00000225655 OTUD7AQ8TE49 926 aaPredicted RBP21.54■■□□□ 1.04
PFN1-201ENST00000225655 TANGO6Q9C0B7 1094 aa21.54■■□□□ 1.04
PFN1-201ENST00000225655 ARPP21Q9UBL0 812 aaPredicted RBP21.54■■□□□ 1.04
PFN1-201ENST00000225655 TMX2Q9Y320 296 aa21.54■■□□□ 1.04
PFN1-201ENST00000225655 A0A0G2JMZ2 1700 aa21.54■■□□□ 1.04
PFN1-201ENST00000225655 SLC15A5A6NIM6 579 aa21.53■■□□□ 1.04
PFN1-201ENST00000225655 LRRFIP1Q32MZ4 808 aaKnown RBP21.53■■□□□ 1.04
PFN1-201ENST00000225655 KIAA1755Q5JYT7 1200 aa21.53■■□□□ 1.04
PFN1-201ENST00000225655 APPBP2Q92624 585 aa21.53■■□□□ 1.04
PFN1-201ENST00000225655 NR2E3Q9Y5X4 410 aa21.53■■□□□ 1.04
PFN1-201ENST00000225655 RNF113AO15541 343 aaKnown RBP21.52■■□□□ 1.04
PFN1-201ENST00000225655 ZFYP08048 801 aaPredicted RBP21.52■■□□□ 1.04
PFN1-201ENST00000225655 PTPREP23469 700 aa21.52■■□□□ 1.04
PFN1-201ENST00000225655 CCL14Q16627 93 aa21.52■■□□□ 1.04
PFN1-201ENST00000225655 SBK1Q52WX2 424 aa21.52■■□□□ 1.04
PFN1-201ENST00000225655 GIMAP6Q6P9H5 292 aa21.52■■□□□ 1.04
PFN1-201ENST00000225655 NECAB2Q7Z6G3 386 aa21.52■■□□□ 1.04
PFN1-201ENST00000225655 CLEC10AQ8IUN9 316 aa21.52■■□□□ 1.04
PFN1-201ENST00000225655 PAWRQ96IZ0 340 aaKnown RBP21.52■■□□□ 1.04
PFN1-201ENST00000225655 VCPKMTQ9H867 229 aa21.52■■□□□ 1.04
PFN1-201ENST00000225655 PARP14Q460N5 1801 aa21.52■■□□□ 1.04
PFN1-201ENST00000225655 SALL3Q9BXA9 1300 aa21.52■■□□□ 1.03
PFN1-201ENST00000225655 GSG1L2A8MUP6 293 aa21.51■■□□□ 1.03
PFN1-201ENST00000225655 CACNB2Q08289 660 aaPredicted RBP21.51■■□□□ 1.03
PFN1-201ENST00000225655 GRB14Q14449 540 aa21.51■■□□□ 1.03
PFN1-201ENST00000225655 WDR78Q5VTH9 848 aa21.51■■□□□ 1.03
PFN1-201ENST00000225655 PLEKHM2Q8IWE5 1019 aa21.51■■□□□ 1.03
PFN1-201ENST00000225655 MB21D1Q8N884 522 aa21.51■■□□□ 1.03
PFN1-201ENST00000225655 DIS3LQ8TF46 1054 aaKnown RBP21.51■■□□□ 1.03
PFN1-201ENST00000225655 OSBP2Q969R2 916 aa21.51■■□□□ 1.03
PFN1-201ENST00000225655 OSBPL3Q9H4L5 887 aa21.51■■□□□ 1.03
PFN1-201ENST00000225655 KANSL2Q9H9L4 492 aa21.51■■□□□ 1.03
PFN1-201ENST00000225655 OGDHLQ9ULD0 1010 aa21.51■■□□□ 1.03
PFN1-201ENST00000225655 IVNS1ABPQ9Y6Y0 642 aa21.51■■□□□ 1.03
PFN1-201ENST00000225655 ZNF236Q9UL36 1845 aa21.5■■□□□ 1.03
PFN1-201ENST00000225655 EVI5O60447 810 aa21.5■■□□□ 1.03
PFN1-201ENST00000225655 PI4K2BQ8TCG2 481 aa21.5■■□□□ 1.03
PFN1-201ENST00000225655 PCDH10Q9P2E7 1040 aa21.5■■□□□ 1.03
PFN1-201ENST00000225655 ALPK3Q96L96 1907 aa21.5■■□□□ 1.03
PFN1-201ENST00000225655 GREB1LQ9C091 1923 aaPredicted RBP21.5■■□□□ 1.03
PFN1-201ENST00000225655 WDR46O15213 610 aaKnown RBP21.49■■□□□ 1.03
PFN1-201ENST00000225655 HOXC6P09630 235 aa21.49■■□□□ 1.03
PFN1-201ENST00000225655 EEF2P13639 858 aaKnown RBP21.49■■□□□ 1.03
PFN1-201ENST00000225655 DSG3P32926 999 aa21.49■■□□□ 1.03
PFN1-201ENST00000225655 MNX1P50219 401 aaPredicted RBP21.49■■□□□ 1.03
PFN1-201ENST00000225655 SPICE1Q8N0Z3 855 aa21.49■■□□□ 1.03
PFN1-201ENST00000225655 SHCBP1Q8NEM2 672 aa21.49■■□□□ 1.03
PFN1-201ENST00000225655 MOV10L1Q9BXT6 1211 aaKnown RBP21.49■■□□□ 1.03
PFN1-201ENST00000225655 NBPF3Q9H094 633 aa21.49■■□□□ 1.03
PFN1-201ENST00000225655 SPATC1LQ9H0A9 340 aa21.49■■□□□ 1.03
PFN1-201ENST00000225655 ROBO3Q96MS0 1386 aa21.48■■□□□ 1.03
PFN1-201ENST00000225655 GPAA1O43292 621 aa21.48■■□□□ 1.03
PFN1-201ENST00000225655 FLOT1O75955 427 aa21.48■■□□□ 1.03
PFN1-201ENST00000225655 GNAT2P19087 354 aa21.48■■□□□ 1.03
PFN1-201ENST00000225655 CHRDL2Q6WN34 429 aa21.48■■□□□ 1.03
PFN1-201ENST00000225655 TRIOBPQ9H2D6 2365 aa21.47■■□□□ 1.03
PFN1-201ENST00000225655 STRNO43815 780 aa21.47■■□□□ 1.03
PFN1-201ENST00000225655 CCND3P30281 292 aaPredicted RBP21.47■■□□□ 1.03
PFN1-201ENST00000225655 FXR1P51114 621 aaKnown RBP eCLIP21.47■■□□□ 1.03
PFN1-201ENST00000225655 MFSD14CQ5VZR4 134 aa21.47■■□□□ 1.03
PFN1-201ENST00000225655 EVI5LQ96CN4 794 aa21.47■■□□□ 1.03
PFN1-201ENST00000225655 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.47■■□□□ 1.03
PFN1-201ENST00000225655 FLRT1Q9NZU1 646 aa21.47■■□□□ 1.03
PFN1-201ENST00000225655 TRIM6-TRIM34B2RNG4 842 aa21.46■■□□□ 1.03
PFN1-201ENST00000225655 M0R2C6 588 aa21.46■■□□□ 1.03
PFN1-201ENST00000225655 PDE4AP27815 886 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms