RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 PODNQ7Z5L7 613 aa28.5■■■□□ 2.15
RUNDC3A-201ENST00000225441 CRACR2BQ8N4Y2 399 aaPredicted RBP28.5■■■□□ 2.15
RUNDC3A-201ENST00000225441 FBXW7Q969H0 707 aa28.5■■■□□ 2.15
RUNDC3A-201ENST00000225441 DBNDD1Q9H9R9 158 aa28.5■■■□□ 2.15
RUNDC3A-201ENST00000225441 GRIK5Q16478 980 aa28.49■■■□□ 2.15
RUNDC3A-201ENST00000225441 AOC3Q16853 763 aa28.49■■■□□ 2.15
RUNDC3A-201ENST00000225441 MFSD14BQ5SR56 506 aa28.49■■■□□ 2.15
RUNDC3A-201ENST00000225441 LCORLQ8N3X6 602 aa28.49■■■□□ 2.15
RUNDC3A-201ENST00000225441 HSD3B7Q9H2F3 369 aa28.49■■■□□ 2.15
RUNDC3A-201ENST00000225441 MDM2Q00987 491 aaPredicted RBP28.48■■■□□ 2.15
RUNDC3A-201ENST00000225441 E4F1Q66K89 784 aaPredicted RBP28.48■■■□□ 2.15
RUNDC3A-201ENST00000225441 METTL16Q86W50 562 aaKnown RBP28.48■■■□□ 2.15
RUNDC3A-201ENST00000225441 CCDC34Q96HJ3 373 aa28.48■■■□□ 2.15
RUNDC3A-201ENST00000225441 MAGEB6P1A0A0J9YX57 407 aa28.48■■■□□ 2.15
RUNDC3A-201ENST00000225441 UBASH3AP57075 661 aa28.48■■■□□ 2.15
RUNDC3A-201ENST00000225441 DIS3L2Q8IYB7 885 aaKnown RBP28.48■■■□□ 2.15
RUNDC3A-201ENST00000225441 MLKLQ8NB16 471 aa28.48■■■□□ 2.15
RUNDC3A-201ENST00000225441 ZNF592Q92610 1267 aa28.47■■■□□ 2.15
RUNDC3A-201ENST00000225441 RIOK1Q9BRS2 568 aaKnown RBP28.47■■■□□ 2.15
RUNDC3A-201ENST00000225441 RNF26Q9BY78 433 aaPredicted RBP28.47■■■□□ 2.15
RUNDC3A-201ENST00000225441 PPIP5K2O43314 1243 aa28.46■■■□□ 2.15
RUNDC3A-201ENST00000225441 ECE2O60344 883 aa28.46■■■□□ 2.15
RUNDC3A-201ENST00000225441 XBP1P17861 261 aa28.46■■■□□ 2.15
RUNDC3A-201ENST00000225441 LMOD1P29536 600 aaPredicted RBP28.46■■■□□ 2.15
RUNDC3A-201ENST00000225441 PNOCQ13519 176 aa28.46■■■□□ 2.15
RUNDC3A-201ENST00000225441 LONRF3Q496Y0 759 aa28.46■■■□□ 2.15
RUNDC3A-201ENST00000225441 FANCBQ8NB91 859 aa28.46■■■□□ 2.15
RUNDC3A-201ENST00000225441 PPP1R13BQ96KQ4 1090 aa28.46■■■□□ 2.15
RUNDC3A-201ENST00000225441 L2HGDHQ9H9P8 463 aa28.46■■■□□ 2.15
RUNDC3A-201ENST00000225441 OGFRQ9NZT2 677 aa28.46■■■□□ 2.15
RUNDC3A-201ENST00000225441 FBXO2Q9UK22 296 aaPredicted RBP28.46■■■□□ 2.15
RUNDC3A-201ENST00000225441 SLU7O95391 586 aaKnown RBP28.46■■■□□ 2.15
RUNDC3A-201ENST00000225441 GSTO1P78417 241 aa28.46■■■□□ 2.15
RUNDC3A-201ENST00000225441 VSTM4Q8IW00 320 aa28.46■■■□□ 2.15
RUNDC3A-201ENST00000225441 STK11IPQ8N1F8 1099 aa28.46■■■□□ 2.15
RUNDC3A-201ENST00000225441 ESR2Q92731 530 aa28.46■■■□□ 2.15
RUNDC3A-201ENST00000225441 TMX1Q9H3N1 280 aa28.46■■■□□ 2.15
RUNDC3A-201ENST00000225441 SRPRBQ9Y5M8 271 aaKnown RBP28.46■■■□□ 2.15
RUNDC3A-201ENST00000225441 TACC3Q9Y6A5 838 aa28.46■■■□□ 2.15
RUNDC3A-201ENST00000225441 BMP15O95972 392 aa28.45■■■□□ 2.14
RUNDC3A-201ENST00000225441 SERPINC1P01008 464 aa28.45■■■□□ 2.14
RUNDC3A-201ENST00000225441 PPARAQ07869 468 aa28.45■■■□□ 2.14
RUNDC3A-201ENST00000225441 UTP14CQ5TAP6 766 aaKnown RBP28.45■■■□□ 2.14
RUNDC3A-201ENST00000225441 CLIC6Q96NY7 704 aa28.45■■■□□ 2.14
RUNDC3A-201ENST00000225441 UBAC1Q9BSL1 405 aa28.45■■■□□ 2.14
RUNDC3A-201ENST00000225441 MYL10Q9BUA6 226 aa28.45■■■□□ 2.14
RUNDC3A-201ENST00000225441 PCDHA5Q9Y5H7 936 aa28.45■■■□□ 2.14
RUNDC3A-201ENST00000225441 BTBD18B2RXH4 712 aa28.44■■■□□ 2.14
RUNDC3A-201ENST00000225441 TOB1P50616 345 aaPredicted RBP28.44■■■□□ 2.14
RUNDC3A-201ENST00000225441 ZNF654Q8IZM8 581 aa28.44■■■□□ 2.14
RUNDC3A-201ENST00000225441 TRMT1Q9NXH9 659 aaKnown RBP28.44■■■□□ 2.14
RUNDC3A-201ENST00000225441 SARSP49591 514 aaKnown RBP28.43■■■□□ 2.14
RUNDC3A-201ENST00000225441 DYNLL1P63167 89 aaKnown RBP28.43■■■□□ 2.14
RUNDC3A-201ENST00000225441 NLGN2Q8NFZ4 835 aa28.43■■■□□ 2.14
RUNDC3A-201ENST00000225441 SUGT1Q9Y2Z0 365 aa28.43■■■□□ 2.14
RUNDC3A-201ENST00000225441 ZNF397Q8NF99 534 aaPredicted RBP28.43■■■□□ 2.14
RUNDC3A-201ENST00000225441 ENOX1Q8TC92 643 aaKnown RBP28.43■■■□□ 2.14
RUNDC3A-201ENST00000225441 PRKAB2O43741 272 aa28.42■■■□□ 2.14
RUNDC3A-201ENST00000225441 LDHCP07864 332 aa28.42■■■□□ 2.14
RUNDC3A-201ENST00000225441 POSTNQ15063 836 aa28.42■■■□□ 2.14
RUNDC3A-201ENST00000225441 CERS5Q8N5B7 392 aa28.42■■■□□ 2.14
RUNDC3A-201ENST00000225441 VPS33BQ9H267 617 aa28.42■■■□□ 2.14
RUNDC3A-201ENST00000225441 INCENPQ9NQS7 918 aa28.42■■■□□ 2.14
RUNDC3A-201ENST00000225441 CALM1P0DP23 149 aa28.41■■■□□ 2.14
RUNDC3A-201ENST00000225441 CALM2P0DP24 149 aa28.41■■■□□ 2.14
RUNDC3A-201ENST00000225441 CALM3P0DP25 149 aa28.41■■■□□ 2.14
RUNDC3A-201ENST00000225441 SEC23AQ15436 765 aa28.41■■■□□ 2.14
RUNDC3A-201ENST00000225441 DIXDC1Q155Q3 683 aa28.41■■■□□ 2.14
RUNDC3A-201ENST00000225441 GTPBP4Q9BZE4 634 aaKnown RBP28.41■■■□□ 2.14
RUNDC3A-201ENST00000225441 KCNQ5Q9NR82 932 aa28.41■■■□□ 2.14
RUNDC3A-201ENST00000225441 ZNF277Q9NRM2 450 aaPredicted RBP28.41■■■□□ 2.14
RUNDC3A-201ENST00000225441 RBM28Q9NW13 759 aaKnown RBP28.41■■■□□ 2.14
RUNDC3A-201ENST00000225441 BCS1LQ9Y276 419 aa28.41■■■□□ 2.14
RUNDC3A-201ENST00000225441 PHLPP2Q6ZVD8 1323 aa28.41■■■□□ 2.14
RUNDC3A-201ENST00000225441 CFAP100Q494V2 611 aa28.41■■■□□ 2.14
RUNDC3A-201ENST00000225441 FOXP4Q8IVH2 680 aaPredicted RBP28.41■■■□□ 2.14
RUNDC3A-201ENST00000225441 AATFQ9NY61 560 aaKnown RBP eCLIP28.41■■■□□ 2.14
RUNDC3A-201ENST00000225441 TOP1P11387 765 aaKnown RBP28.4■■■□□ 2.14
RUNDC3A-201ENST00000225441 AKAP17AQ02040 695 aaKnown RBP28.4■■■□□ 2.14
RUNDC3A-201ENST00000225441 RRP12Q5JTH9 1297 aaKnown RBP28.4■■■□□ 2.14
RUNDC3A-201ENST00000225441 STRIP1Q5VSL9 837 aa28.4■■■□□ 2.14
RUNDC3A-201ENST00000225441 GOLGA6L9A6NEM1 432 aa28.39■■■□□ 2.14
RUNDC3A-201ENST00000225441 FGRP09769 529 aa28.39■■■□□ 2.14
RUNDC3A-201ENST00000225441 ATP1A3P13637 1013 aa28.39■■■□□ 2.14
RUNDC3A-201ENST00000225441 ERCC5P28715 1186 aaPredicted RBP28.39■■■□□ 2.14
RUNDC3A-201ENST00000225441 GUCY1A2P33402 732 aa28.39■■■□□ 2.14
RUNDC3A-201ENST00000225441 FKBP1AP62942 108 aaKnown RBP28.39■■■□□ 2.14
RUNDC3A-201ENST00000225441 MORC3Q14149 939 aa28.39■■■□□ 2.14
RUNDC3A-201ENST00000225441 SMARCE1Q969G3 411 aa28.39■■■□□ 2.14
RUNDC3A-201ENST00000225441 MXD3Q9BW11 206 aa28.39■■■□□ 2.14
RUNDC3A-201ENST00000225441 TOMM22Q9NS69 142 aa28.39■■■□□ 2.14
RUNDC3A-201ENST00000225441 MAN1B1Q9UKM7 699 aa28.39■■■□□ 2.14
RUNDC3A-201ENST00000225441 ZNF215Q9UL58 517 aaPredicted RBP28.39■■■□□ 2.14
RUNDC3A-201ENST00000225441 SCN9AQ15858 1988 aa28.39■■■□□ 2.13
RUNDC3A-201ENST00000225441 ZSCAN12O43309 604 aa28.39■■■□□ 2.13
RUNDC3A-201ENST00000225441 PRPF3O43395 683 aaKnown RBP28.39■■■□□ 2.13
RUNDC3A-201ENST00000225441 NT5C2P49902 561 aa28.39■■■□□ 2.13
RUNDC3A-201ENST00000225441 FER1L6Q2WGJ9 1857 aa28.39■■■□□ 2.13
RUNDC3A-201ENST00000225441 SLF2Q8IX21 1173 aa28.39■■■□□ 2.13
RUNDC3A-201ENST00000225441 LARGE2Q8N3Y3 721 aa28.39■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms