RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 ZMYM6O95789 1325 aa15.05■□□□□ -0
LSM5-201ENST00000223084 DOCK3Q8IZD9 2030 aa15.04■□□□□ -0
LSM5-201ENST00000223084 MYH4Q9Y623 1939 aa15.04■□□□□ -0
LSM5-201ENST00000223084 RAD50Q92878 1312 aa15.04■□□□□ -0
LSM5-201ENST00000223084 USP17L15C9J2P7 530 aa15.04■□□□□ -0
LSM5-201ENST00000223084 USP17L13C9JLJ4 530 aa15.04■□□□□ -0
LSM5-201ENST00000223084 USP17L11C9JVI0 530 aa15.04■□□□□ -0
LSM5-201ENST00000223084 USP17L18D6R9N7 530 aa15.04■□□□□ -0
LSM5-201ENST00000223084 USP17L22D6RA61 530 aa15.04■□□□□ -0
LSM5-201ENST00000223084 USP17L17D6RBQ6 530 aa15.04■□□□□ -0
LSM5-201ENST00000223084 USP17L19D6RCP7 530 aa15.04■□□□□ -0
LSM5-201ENST00000223084 USP17L20D6RJB6 530 aa15.04■□□□□ -0
LSM5-201ENST00000223084 ORC4O43929 436 aa15.04■□□□□ -0
LSM5-201ENST00000223084 RAD21O60216 631 aa15.04■□□□□ -0
LSM5-201ENST00000223084 RANBP6O60518 1105 aaKnown RBP15.04■□□□□ -0
LSM5-201ENST00000223084 NMT2O60551 498 aa15.04■□□□□ -0
LSM5-201ENST00000223084 PSMC4P43686 418 aa15.04■□□□□ -0
LSM5-201ENST00000223084 HERVK_113P62684 666 aa15.04■□□□□ -0
LSM5-201ENST00000223084 PTH1RQ03431 593 aa15.04■□□□□ -0
LSM5-201ENST00000223084 USP17L24Q0WX57 530 aa15.04■□□□□ -0
LSM5-201ENST00000223084 NKX2-3Q8TAU0 364 aa15.04■□□□□ -0
LSM5-201ENST00000223084 CEP95Q96GE4 821 aa15.04■□□□□ -0
LSM5-201ENST00000223084 VCPKMTQ9H867 229 aa15.04■□□□□ -0
LSM5-201ENST00000223084 TXNRD2Q9NNW7 524 aa15.04■□□□□ -0
LSM5-201ENST00000223084 NYAP2Q9P242 653 aa15.04■□□□□ -0
LSM5-201ENST00000223084 TSPY2A6NKD2 308 aa15.03■□□□□ -0
LSM5-201ENST00000223084 ZNF213O14771 459 aa15.03■□□□□ -0
LSM5-201ENST00000223084 SGSM2O43147 1006 aa15.03■□□□□ -0
LSM5-201ENST00000223084 FMNL1O95466 1100 aaPredicted RBP15.03■□□□□ -0
LSM5-201ENST00000223084 FGRP09769 529 aa15.03■□□□□ -0
LSM5-201ENST00000223084 GCLCP48506 637 aaPredicted RBP15.03■□□□□ -0
LSM5-201ENST00000223084 PKN2Q16513 984 aaKnown RBP15.03■□□□□ -0
LSM5-201ENST00000223084 BMP2KLQ5H9B9 411 aa15.03■□□□□ -0
LSM5-201ENST00000223084 AKNAD1Q5T1N1 836 aa15.03■□□□□ -0
LSM5-201ENST00000223084 ERICH6BQ5W0A0 696 aa15.03■□□□□ -0
LSM5-201ENST00000223084 TRIM47Q96LD4 638 aa15.03■□□□□ -0
LSM5-201ENST00000223084 TANGO6Q9C0B7 1094 aa15.03■□□□□ -0
LSM5-201ENST00000223084 SH2D4AQ9H788 454 aa15.03■□□□□ -0
LSM5-201ENST00000223084 MTMR4Q9NYA4 1195 aa15.03■□□□□ -0
LSM5-201ENST00000223084 PLIN4Q96Q06 1357 aa15.02■□□□□ -0
LSM5-201ENST00000223084 MGAMO43451 1857 aa15.02■□□□□ -0
LSM5-201ENST00000223084 FAM110CQ1W6H9 321 aa15.02■□□□□ -0
LSM5-201ENST00000223084 FBXO46Q6PJ61 603 aaPredicted RBP15.02■□□□□ -0
LSM5-201ENST00000223084 SAMD1Q6SPF0 538 aaPredicted RBP15.02■□□□□ -0
LSM5-201ENST00000223084 MFSD6Q6ZSS7 791 aa15.02■□□□□ -0
LSM5-201ENST00000223084 LRRC47Q8N1G4 583 aaKnown RBP15.02■□□□□ -0
LSM5-201ENST00000223084 STAG1Q8WVM7 1258 aa15.02■□□□□ -0
LSM5-201ENST00000223084 LPAR1Q92633 364 aa15.02■□□□□ -0
LSM5-201ENST00000223084 PAGR1Q9BTK6 254 aa15.02■□□□□ -0
LSM5-201ENST00000223084 GOPCQ9HD26 462 aa15.02■□□□□ -0
LSM5-201ENST00000223084 IL17RBQ9NRM6 502 aa15.02■□□□□ -0
LSM5-201ENST00000223084 RBPJLQ9UBG7 517 aa15.02■□□□□ -0
LSM5-201ENST00000223084 PTPN22Q9Y2R2 807 aa15.02■□□□□ -0
LSM5-201ENST00000223084 NEDD4P46934 1319 aa15.01□□□□□ -0.01
LSM5-201ENST00000223084 SPDYE16A6NNV3 312 aaPredicted RBP15.01□□□□□ -0.01
LSM5-201ENST00000223084 TTLL1O95922 423 aa15.01□□□□□ -0.01
LSM5-201ENST00000223084 FCGRTP55899 365 aa15.01□□□□□ -0.01
LSM5-201ENST00000223084 ARHGEF6Q15052 776 aa15.01□□□□□ -0.01
LSM5-201ENST00000223084 Q3C1V9 767 aa15.01□□□□□ -0.01
LSM5-201ENST00000223084 FAM83BQ5T0W9 1011 aa15.01□□□□□ -0.01
LSM5-201ENST00000223084 CHMP4CQ96CF2 233 aa15.01□□□□□ -0.01
LSM5-201ENST00000223084 NUP88Q99567 741 aaPredicted RBP15.01□□□□□ -0.01
LSM5-201ENST00000223084 CTNNA3Q9UI47 895 aa15.01□□□□□ -0.01
LSM5-201ENST00000223084 HPS5Q9UPZ3 1129 aa15.01□□□□□ -0.01
LSM5-201ENST00000223084 LAMA4Q16363 1823 aa15.01□□□□□ -0.01
LSM5-201ENST00000223084 RLFQ13129 1914 aa15□□□□□ -0.01
LSM5-201ENST00000223084 F5H6K3 240 aa15□□□□□ -0.01
LSM5-201ENST00000223084 WDR46O15213 610 aaKnown RBP15□□□□□ -0.01
LSM5-201ENST00000223084 CNMDO75829 334 aa15□□□□□ -0.01
LSM5-201ENST00000223084 NDUFB10O96000 172 aa15□□□□□ -0.01
LSM5-201ENST00000223084 KLRC3Q07444 240 aa15□□□□□ -0.01
LSM5-201ENST00000223084 IMMTQ16891 758 aaKnown RBP15□□□□□ -0.01
LSM5-201ENST00000223084 GPRC5AQ8NFJ5 357 aa15□□□□□ -0.01
LSM5-201ENST00000223084 MKL1Q969V6 931 aa15□□□□□ -0.01
LSM5-201ENST00000223084 ESYT1Q9BSJ8 1104 aa15□□□□□ -0.01
LSM5-201ENST00000223084 MORF4L1Q9UBU8 362 aa15□□□□□ -0.01
LSM5-201ENST00000223084 PTCH2Q9Y6C5 1203 aa15□□□□□ -0.01
LSM5-201ENST00000223084 CCDC85CA6NKD9 419 aa14.99□□□□□ -0.01
LSM5-201ENST00000223084 FLOT1O75955 427 aa14.99□□□□□ -0.01
LSM5-201ENST00000223084 DSG3P32926 999 aa14.99□□□□□ -0.01
LSM5-201ENST00000223084 ERVK-9P63128 1117 aa14.99□□□□□ -0.01
LSM5-201ENST00000223084 ERVK-24P63145 666 aa14.99□□□□□ -0.01
LSM5-201ENST00000223084 COG2Q14746 738 aa14.99□□□□□ -0.01
LSM5-201ENST00000223084 RNF41Q9H4P4 317 aaPredicted RBP14.99□□□□□ -0.01
LSM5-201ENST00000223084 FBXO28Q9NVF7 368 aa14.99□□□□□ -0.01
LSM5-201ENST00000223084 BTBD7Q9P203 1132 aa14.99□□□□□ -0.01
LSM5-201ENST00000223084 SRRDQ9UH36 339 aa14.99□□□□□ -0.01
LSM5-201ENST00000223084 GABRQQ9UN88 632 aa14.99□□□□□ -0.01
LSM5-201ENST00000223084 STX8Q9UNK0 236 aa14.99□□□□□ -0.01
LSM5-201ENST00000223084 B4E1Z4 1266 aa14.98□□□□□ -0.01
LSM5-201ENST00000223084 TNPO2O14787 897 aaKnown RBP14.98□□□□□ -0.01
LSM5-201ENST00000223084 PCP11498 1178 aaKnown RBP14.98□□□□□ -0.01
LSM5-201ENST00000223084 HOXD10P28358 340 aa14.98□□□□□ -0.01
LSM5-201ENST00000223084 PRKCZQ05513 592 aa14.98□□□□□ -0.01
LSM5-201ENST00000223084 GTF3C2Q8WUA4 911 aaPredicted RBP14.98□□□□□ -0.01
LSM5-201ENST00000223084 ATG4CQ96DT6 458 aa14.98□□□□□ -0.01
LSM5-201ENST00000223084 ZKSCAN3Q9BRR0 538 aa14.98□□□□□ -0.01
LSM5-201ENST00000223084 HOXC10Q9NYD6 342 aa14.98□□□□□ -0.01
LSM5-201ENST00000223084 MTMR7Q9Y216 660 aa14.98□□□□□ -0.01
LSM5-201ENST00000223084 RABGAP1Q9Y3P9 1069 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms