RNA–Protein interactions for RNA: ENST00000221996.11

CRX-201, Transcript of cone-rod homeobox, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CRX, Length 4,470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-201ENST00000221996 SMYD4Q8IYR2 804 aaPredicted RBP11.01□□□□□ -0.65
CRX-201ENST00000221996 CSGALNACT2Q8N6G5 542 aa11.01□□□□□ -0.65
CRX-201ENST00000221996 IL17RAQ96F46 866 aa11.01□□□□□ -0.65
CRX-201ENST00000221996 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.01□□□□□ -0.65
CRX-201ENST00000221996 BRIP1Q9BX63 1249 aa11.01□□□□□ -0.65
CRX-201ENST00000221996 EPB41L4AQ9HCS5 686 aaPredicted RBP11.01□□□□□ -0.65
CRX-201ENST00000221996 JADE2Q9NQC1 790 aa11.01□□□□□ -0.65
CRX-201ENST00000221996 SEPT11Q9NVA2 429 aaKnown RBP11.01□□□□□ -0.65
CRX-201ENST00000221996 HPS5Q9UPZ3 1129 aa11.01□□□□□ -0.65
CRX-201ENST00000221996 SRPRBQ9Y5M8 271 aaKnown RBP11.01□□□□□ -0.65
CRX-201ENST00000221996 CCDC66A2RUB6 948 aa11.01□□□□□ -0.65
CRX-201ENST00000221996 ATP2B4P23634 1241 aa11.01□□□□□ -0.65
CRX-201ENST00000221996 CDC25AP30304 524 aa11.01□□□□□ -0.65
CRX-201ENST00000221996 TBC1D8BQ0IIM8 1120 aa11.01□□□□□ -0.65
CRX-201ENST00000221996 CT47A1Q5JQC4 288 aaPredicted RBP11.01□□□□□ -0.65
CRX-201ENST00000221996 RESP18Q5W5W9 173 aa11.01□□□□□ -0.65
CRX-201ENST00000221996 DPP8Q6V1X1 898 aaPredicted RBP11.01□□□□□ -0.65
CRX-201ENST00000221996 FAM84BQ96KN1 310 aaPredicted RBP11.01□□□□□ -0.65
CRX-201ENST00000221996 UIMC1Q96RL1 719 aa11.01□□□□□ -0.65
CRX-201ENST00000221996 DESI2Q9BSY9 194 aa11.01□□□□□ -0.65
CRX-201ENST00000221996 STK36Q9NRP7 1315 aa11.01□□□□□ -0.65
CRX-201ENST00000221996 NWD1Q149M9 1564 aa11.01□□□□□ -0.65
CRX-201ENST00000221996 PTPREP23469 700 aa11.01□□□□□ -0.65
CRX-201ENST00000221996 KRT9P35527 623 aa11.01□□□□□ -0.65
CRX-201ENST00000221996 MRPL12P52815 198 aaKnown RBP11.01□□□□□ -0.65
CRX-201ENST00000221996 SF3B2Q13435 895 aaKnown RBP11.01□□□□□ -0.65
CRX-201ENST00000221996 REXO1Q8N1G1 1221 aaKnown RBP11.01□□□□□ -0.65
CRX-201ENST00000221996 NARFQ9UHQ1 456 aa11.01□□□□□ -0.65
CRX-201ENST00000221996 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11□□□□□ -0.65
CRX-201ENST00000221996 NMT2O60551 498 aa11□□□□□ -0.65
CRX-201ENST00000221996 EVCP57679 992 aa11□□□□□ -0.65
CRX-201ENST00000221996 CABP7Q86V35 215 aa11□□□□□ -0.65
CRX-201ENST00000221996 ARFGAP3Q9NP61 516 aa11□□□□□ -0.65
CRX-201ENST00000221996 BIN2Q9UBW5 565 aaPredicted RBP11□□□□□ -0.65
CRX-201ENST00000221996 PPP1R12BO60237 982 aaPredicted RBP11□□□□□ -0.65
CRX-201ENST00000221996 SKIDA1Q1XH10 827 aa11□□□□□ -0.65
CRX-201ENST00000221996 SHC4Q6S5L8 630 aa11□□□□□ -0.65
CRX-201ENST00000221996 DRC1Q96MC2 740 aa11□□□□□ -0.65
CRX-201ENST00000221996 FEZ1Q99689 392 aa11□□□□□ -0.65
CRX-201ENST00000221996 LRWD1Q9UFC0 647 aa11□□□□□ -0.65
CRX-201ENST00000221996 TTF2Q9UNY4 1162 aaKnown RBP11□□□□□ -0.65
CRX-201ENST00000221996 PNPLA7Q6ZV29 1317 aa11□□□□□ -0.65
CRX-201ENST00000221996 IGSF3O75054 1194 aa11□□□□□ -0.65
CRX-201ENST00000221996 TCP10Q12799 353 aa11□□□□□ -0.65
CRX-201ENST00000221996 SYCP1Q15431 976 aa11□□□□□ -0.65
CRX-201ENST00000221996 SPATA1Q5VX52 437 aa11□□□□□ -0.65
CRX-201ENST00000221996 KIF13AQ9H1H9 1805 aa11□□□□□ -0.65
CRX-201ENST00000221996 CTAGE15A4D2H0 777 aa10.99□□□□□ -0.65
CRX-201ENST00000221996 USP17L3A6NCW0 530 aa10.99□□□□□ -0.65
CRX-201ENST00000221996 USP17L4A6NCW7 530 aa10.99□□□□□ -0.65
CRX-201ENST00000221996 SLFN14P0C7P3 912 aa10.99□□□□□ -0.65
CRX-201ENST00000221996 CTAGE8P0CG41 777 aa10.99□□□□□ -0.65
CRX-201ENST00000221996 ETF1P62495 437 aaKnown RBP10.99□□□□□ -0.65
CRX-201ENST00000221996 IQCB1Q15051 598 aa10.99□□□□□ -0.65
CRX-201ENST00000221996 USP17L1Q7RTZ2 530 aa10.99□□□□□ -0.65
CRX-201ENST00000221996 CTAGE6Q86UF2 777 aa10.99□□□□□ -0.65
CRX-201ENST00000221996 CTAGE4Q8IX94 777 aa10.99□□□□□ -0.65
CRX-201ENST00000221996 ERMNQ8TAM6 284 aa10.99□□□□□ -0.65
CRX-201ENST00000221996 TAF4BQ92750 862 aa10.99□□□□□ -0.65
CRX-201ENST00000221996 GOLGA1Q92805 767 aa10.99□□□□□ -0.65
CRX-201ENST00000221996 CCDC42Q96M95 316 aa10.99□□□□□ -0.65
CRX-201ENST00000221996 COL5A2P05997 1499 aaPredicted RBP10.99□□□□□ -0.65
CRX-201ENST00000221996 FRMPD2Q68DX3 1309 aaPredicted RBP10.99□□□□□ -0.65
CRX-201ENST00000221996 NTSR2O95665 410 aa10.99□□□□□ -0.65
CRX-201ENST00000221996 ADCY7P51828 1080 aa10.99□□□□□ -0.65
CRX-201ENST00000221996 LRRC47Q8N1G4 583 aaKnown RBP10.99□□□□□ -0.65
CRX-201ENST00000221996 ZBTB9Q96C00 473 aa10.99□□□□□ -0.65
CRX-201ENST00000221996 DCP1AQ9NPI6 582 aaPredicted RBP10.99□□□□□ -0.65
CRX-201ENST00000221996 SPDYE3A6NKU9 549 aa10.99□□□□□ -0.65
CRX-201ENST00000221996 TMTC3Q6ZXV5 915 aa10.99□□□□□ -0.65
CRX-201ENST00000221996 DYMQ7RTS9 669 aa10.99□□□□□ -0.65
CRX-201ENST00000221996 LRP10Q7Z4F1 713 aa10.99□□□□□ -0.65
CRX-201ENST00000221996 EEF2KMTQ96G04 330 aa10.99□□□□□ -0.65
CRX-201ENST00000221996 CRACR2AQ9BSW2 395 aa10.99□□□□□ -0.65
CRX-201ENST00000221996 NOC4LQ9BVI4 516 aaKnown RBP10.99□□□□□ -0.65
CRX-201ENST00000221996 KCNF1Q9H3M0 494 aa10.99□□□□□ -0.65
CRX-201ENST00000221996 SAMSN1Q9NSI8 373 aaKnown RBP10.99□□□□□ -0.65
CRX-201ENST00000221996 USP40Q9NVE5 1235 aa10.99□□□□□ -0.65
CRX-201ENST00000221996 SERPINB2P05120 415 aa10.99□□□□□ -0.65
CRX-201ENST00000221996 ERCC3P19447 782 aa10.99□□□□□ -0.65
CRX-201ENST00000221996 PAFAH1B1P43034 410 aa10.99□□□□□ -0.65
CRX-201ENST00000221996 SCNN1DP51172 638 aa10.99□□□□□ -0.65
CRX-201ENST00000221996 DHX40Q8IX18 779 aaKnown RBP10.99□□□□□ -0.65
CRX-201ENST00000221996 GSDMAQ96QA5 445 aa10.99□□□□□ -0.65
CRX-201ENST00000221996 FUCA2Q9BTY2 467 aa10.99□□□□□ -0.65
CRX-201ENST00000221996 GTPBP6O43824 516 aaPredicted RBP10.98□□□□□ -0.65
CRX-201ENST00000221996 MATR3P43243 847 aaKnown RBP eCLIP10.98□□□□□ -0.65
CRX-201ENST00000221996 KRT83P78385 493 aa10.98□□□□□ -0.65
CRX-201ENST00000221996 CALCRLQ16602 461 aa10.98□□□□□ -0.65
CRX-201ENST00000221996 DOK7Q18PE1 504 aa10.98□□□□□ -0.65
CRX-201ENST00000221996 CTR9Q6PD62 1173 aa10.98□□□□□ -0.65
CRX-201ENST00000221996 LEKR1Q6ZMV7 388 aa10.98□□□□□ -0.65
CRX-201ENST00000221996 EHBP1Q8NDI1 1231 aa10.98□□□□□ -0.65
CRX-201ENST00000221996 SNX29Q8TEQ0 813 aa10.98□□□□□ -0.65
CRX-201ENST00000221996 PPP1R13BQ96KQ4 1090 aa10.98□□□□□ -0.65
CRX-201ENST00000221996 SPATA31A1Q5TZJ5 1347 aa10.98□□□□□ -0.65
CRX-201ENST00000221996 POTEB2H3BUK9 544 aa10.98□□□□□ -0.65
CRX-201ENST00000221996 KRT86O43790 486 aa10.98□□□□□ -0.65
CRX-201ENST00000221996 TBCAO75347 108 aaKnown RBP10.98□□□□□ -0.65
CRX-201ENST00000221996 ERCC5P28715 1186 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms