RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 MTMR2Q13614 643 aa15.44■□□□□ 0.06
TIMP1-201ENST00000218388 ANKRD1Q15327 319 aa15.44■□□□□ 0.06
TIMP1-201ENST00000218388 SEC23AQ15436 765 aa15.44■□□□□ 0.06
TIMP1-201ENST00000218388 USP17L2Q6R6M4 530 aa15.44■□□□□ 0.06
TIMP1-201ENST00000218388 SYNE3Q6ZMZ3 975 aa15.44■□□□□ 0.06
TIMP1-201ENST00000218388 Q6ZUG5 572 aa15.44■□□□□ 0.06
TIMP1-201ENST00000218388 IGDCC4Q8TDY8 1250 aa15.44■□□□□ 0.06
TIMP1-201ENST00000218388 TCEANC2Q96MN5 208 aa15.44■□□□□ 0.06
TIMP1-201ENST00000218388 TMEM47Q9BQJ4 181 aa15.44■□□□□ 0.06
TIMP1-201ENST00000218388 LRRC2Q9BYS8 371 aa15.44■□□□□ 0.06
TIMP1-201ENST00000218388 TMOD4Q9NZQ9 345 aa15.44■□□□□ 0.06
TIMP1-201ENST00000218388 KCNH4Q9UQ05 1017 aa15.44■□□□□ 0.06
TIMP1-201ENST00000218388 PTPRFP10586 1907 aa15.43■□□□□ 0.06
TIMP1-201ENST00000218388 ST18O60284 1047 aa15.43■□□□□ 0.06
TIMP1-201ENST00000218388 HSPA6P17066 643 aa15.43■□□□□ 0.06
TIMP1-201ENST00000218388 RCSD1Q6JBY9 416 aa15.43■□□□□ 0.06
TIMP1-201ENST00000218388 CATIPQ7Z7H3 387 aa15.43■□□□□ 0.06
TIMP1-201ENST00000218388 LRRC47Q8N1G4 583 aaKnown RBP15.43■□□□□ 0.06
TIMP1-201ENST00000218388 FBXL16Q8N461 479 aa15.43■□□□□ 0.06
TIMP1-201ENST00000218388 PNMA1Q8ND90 353 aa15.43■□□□□ 0.06
TIMP1-201ENST00000218388 GMCL1P1Q8NEA9 526 aa15.43■□□□□ 0.06
TIMP1-201ENST00000218388 ACER1Q8TDN7 264 aa15.43■□□□□ 0.06
TIMP1-201ENST00000218388 LPAR1Q92633 364 aa15.43■□□□□ 0.06
TIMP1-201ENST00000218388 KIF2CQ99661 725 aa15.43■□□□□ 0.06
TIMP1-201ENST00000218388 VCPKMTQ9H867 229 aa15.43■□□□□ 0.06
TIMP1-201ENST00000218388 LY9Q9HBG7 655 aa15.43■□□□□ 0.06
TIMP1-201ENST00000218388 A0A1W2PRG0 241 aa15.42■□□□□ 0.06
TIMP1-201ENST00000218388 MANSC4A6NHS7 340 aaPredicted RBP15.42■□□□□ 0.06
TIMP1-201ENST00000218388 RAD21O60216 631 aa15.42■□□□□ 0.06
TIMP1-201ENST00000218388 CETPP11597 493 aa15.42■□□□□ 0.06
TIMP1-201ENST00000218388 HMGCS2P54868 508 aa15.42■□□□□ 0.06
TIMP1-201ENST00000218388 ZYXQ15942 572 aaKnown RBP15.42■□□□□ 0.06
TIMP1-201ENST00000218388 SH3D19Q5HYK7 790 aa15.42■□□□□ 0.06
TIMP1-201ENST00000218388 FASTKD5Q7L8L6 764 aaKnown RBP15.42■□□□□ 0.06
TIMP1-201ENST00000218388 SGMS1Q86VZ5 419 aa15.42■□□□□ 0.06
TIMP1-201ENST00000218388 SIAH1Q8IUQ4 282 aa15.42■□□□□ 0.06
TIMP1-201ENST00000218388 PROCA1Q8NCQ7 364 aaPredicted RBP15.42■□□□□ 0.06
TIMP1-201ENST00000218388 ALDH8A1Q9H2A2 487 aaPredicted RBP15.42■□□□□ 0.06
TIMP1-201ENST00000218388 SLC12A7Q9Y666 1083 aa15.42■□□□□ 0.06
TIMP1-201ENST00000218388 LOC285556D6RIA3 1793 aa15.41■□□□□ 0.06
TIMP1-201ENST00000218388 A0A0G2JLL6 359 aaPredicted RBP15.41■□□□□ 0.06
TIMP1-201ENST00000218388 DDAH1O94760 285 aa15.41■□□□□ 0.06
TIMP1-201ENST00000218388 CALM1P0DP23 149 aa15.41■□□□□ 0.06
TIMP1-201ENST00000218388 CALM2P0DP24 149 aa15.41■□□□□ 0.06
TIMP1-201ENST00000218388 CALM3P0DP25 149 aa15.41■□□□□ 0.06
TIMP1-201ENST00000218388 GJA5P36382 358 aa15.41■□□□□ 0.06
TIMP1-201ENST00000218388 MKRN3Q13064 507 aaKnown RBP15.41■□□□□ 0.06
TIMP1-201ENST00000218388 NOGQ13253 232 aa15.41■□□□□ 0.06
TIMP1-201ENST00000218388 GRM1Q13255 1194 aa15.41■□□□□ 0.06
TIMP1-201ENST00000218388 COL9A3Q14050 684 aaPredicted RBP15.41■□□□□ 0.06
TIMP1-201ENST00000218388 CYP4F22Q6NT55 531 aa15.41■□□□□ 0.06
TIMP1-201ENST00000218388 PRRT2Q7Z6L0 340 aaPredicted RBP15.41■□□□□ 0.06
TIMP1-201ENST00000218388 BRF1Q92994 677 aa15.41■□□□□ 0.06
TIMP1-201ENST00000218388 CAPNS2Q96L46 248 aa15.41■□□□□ 0.06
TIMP1-201ENST00000218388 C12orf42Q96LP6 360 aa15.41■□□□□ 0.06
TIMP1-201ENST00000218388 AGXT2Q9BYV1 514 aa15.41■□□□□ 0.06
TIMP1-201ENST00000218388 F5H6K3 240 aa15.4■□□□□ 0.06
TIMP1-201ENST00000218388 WDR46O15213 610 aaKnown RBP15.4■□□□□ 0.06
TIMP1-201ENST00000218388 INHBEP58166 350 aa15.4■□□□□ 0.06
TIMP1-201ENST00000218388 KLRC3Q07444 240 aa15.4■□□□□ 0.06
TIMP1-201ENST00000218388 SREBF2Q12772 1141 aa15.4■□□□□ 0.06
TIMP1-201ENST00000218388 PABPC4Q13310 644 aaKnown RBP eCLIP15.4■□□□□ 0.065e-74■■□□□ 12.4
TIMP1-201ENST00000218388 SLFN13Q68D06 897 aa15.4■□□□□ 0.06
TIMP1-201ENST00000218388 GADL1Q6ZQY3 521 aa15.4■□□□□ 0.06
TIMP1-201ENST00000218388 REM2Q8IYK8 340 aaPredicted RBP15.4■□□□□ 0.06
TIMP1-201ENST00000218388 ZNF654Q8IZM8 581 aa15.4■□□□□ 0.06
TIMP1-201ENST00000218388 DCAF4Q8WV16 495 aa15.4■□□□□ 0.06
TIMP1-201ENST00000218388 CCL15-CCL14A0A0B4J2E2 113 aa15.39■□□□□ 0.05
TIMP1-201ENST00000218388 KLF18A0A0U1RQI7 1052 aa15.39■□□□□ 0.05
TIMP1-201ENST00000218388 FAM155AB1AL88 458 aaPredicted RBP15.39■□□□□ 0.05
TIMP1-201ENST00000218388 NDUFB10O96000 172 aa15.39■□□□□ 0.05
TIMP1-201ENST00000218388 SLC1A4P43007 532 aa15.39■□□□□ 0.05
TIMP1-201ENST00000218388 RCAN1P53805 252 aa15.39■□□□□ 0.05
TIMP1-201ENST00000218388 AK2P54819 239 aa15.39■□□□□ 0.05
TIMP1-201ENST00000218388 CCL15Q16663 113 aa15.39■□□□□ 0.05
TIMP1-201ENST00000218388 GMCL1Q96IK5 515 aa15.39■□□□□ 0.05
TIMP1-201ENST00000218388 GPHNQ9NQX3 736 aaPredicted RBP15.39■□□□□ 0.05
TIMP1-201ENST00000218388 EMILIN3Q9NT22 766 aa15.39■□□□□ 0.05
TIMP1-201ENST00000218388 ISY1Q9ULR0 285 aaKnown RBP15.39■□□□□ 0.05
TIMP1-201ENST00000218388 NAP1L2Q9ULW6 460 aaPredicted RBP15.39■□□□□ 0.05
TIMP1-201ENST00000218388 MTMR7Q9Y216 660 aa15.39■□□□□ 0.05
TIMP1-201ENST00000218388 ZBTB43O43298 467 aa15.38■□□□□ 0.05
TIMP1-201ENST00000218388 VCAM1P19320 739 aa15.38■□□□□ 0.05
TIMP1-201ENST00000218388 KIF5BP33176 963 aa15.38■□□□□ 0.05
TIMP1-201ENST00000218388 MCM2P49736 904 aa15.38■□□□□ 0.05
TIMP1-201ENST00000218388 APOBRQ0VD83 1088 aa15.38■□□□□ 0.05
TIMP1-201ENST00000218388 TOB2Q14106 344 aaPredicted RBP15.38■□□□□ 0.05
TIMP1-201ENST00000218388 CCDC96Q2M329 555 aa15.38■□□□□ 0.05
TIMP1-201ENST00000218388 ASPRV1Q53RT3 343 aa15.38■□□□□ 0.05
TIMP1-201ENST00000218388 GPATCH4Q5T3I0 446 aaKnown RBP15.38■□□□□ 0.05
TIMP1-201ENST00000218388 OTUD7BQ6GQQ9 843 aa15.38■□□□□ 0.05
TIMP1-201ENST00000218388 APOA5Q6Q788 366 aa15.38■□□□□ 0.05
TIMP1-201ENST00000218388 SPICE1Q8N0Z3 855 aa15.38■□□□□ 0.05
TIMP1-201ENST00000218388 CTCFLQ8NI51 663 aaPredicted RBP15.38■□□□□ 0.05
TIMP1-201ENST00000218388 NUP133Q8WUM0 1156 aa15.38■□□□□ 0.05
TIMP1-201ENST00000218388 MS4A4AQ96JQ5 239 aa15.38■□□□□ 0.05
TIMP1-201ENST00000218388 MAP3K14Q99558 947 aa15.38■□□□□ 0.05
TIMP1-201ENST00000218388 SENP2Q9HC62 589 aa15.38■□□□□ 0.05
TIMP1-201ENST00000218388 AGTPBP1Q9UPW5 1226 aa15.38■□□□□ 0.05
TIMP1-201ENST00000218388 TESPA1A2RU30 521 aaPredicted RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms