RNA–Protein interactions for RNA: ENST00000216288.11

MARK3-201, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best) BASIC

Gene MARK3, Length 2,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-201ENST00000216288 MAP3K9P80192 1104 aa13.89□□□□□ -0.19
MARK3-201ENST00000216288 CTR9Q6PD62 1173 aa13.89□□□□□ -0.19
MARK3-201ENST00000216288 PTF1AQ7RTS3 328 aa13.89□□□□□ -0.19
MARK3-201ENST00000216288 TXNRD3Q86VQ6 643 aa13.89□□□□□ -0.19
MARK3-201ENST00000216288 SLC35F6Q8N357 371 aa13.89□□□□□ -0.19
MARK3-201ENST00000216288 CHP1Q99653 195 aa13.89□□□□□ -0.19
MARK3-201ENST00000216288 RNF41Q9H4P4 317 aaPredicted RBP13.89□□□□□ -0.19
MARK3-201ENST00000216288 ZNF142P52746 1687 aaPredicted RBP13.89□□□□□ -0.19
MARK3-201ENST00000216288 LOC102724428A0A0B4J2F2 783 aa13.88□□□□□ -0.19
MARK3-201ENST00000216288 A0A1B0GTH6 734 aa13.88□□□□□ -0.19
MARK3-201ENST00000216288 EFCAB8A8MWE9 144 aa13.88□□□□□ -0.19
MARK3-201ENST00000216288 PPP1R3GB7ZBB8 358 aa13.88□□□□□ -0.19
MARK3-201ENST00000216288 ZRANB2O95218 330 aaKnown RBP eCLIP13.88□□□□□ -0.19
MARK3-201ENST00000216288 USP17L8P0C7I0 530 aa13.88□□□□□ -0.19
MARK3-201ENST00000216288 SIK1P57059 783 aa13.88□□□□□ -0.19
MARK3-201ENST00000216288 TROAPQ12815 778 aa13.88□□□□□ -0.19
MARK3-201ENST00000216288 CC2D1AQ6P1N0 951 aaPredicted RBP13.88□□□□□ -0.19
MARK3-201ENST00000216288 IQCA1Q86XH1 822 aa13.88□□□□□ -0.19
MARK3-201ENST00000216288 STAG2Q8N3U4 1231 aa13.88□□□□□ -0.19
MARK3-201ENST00000216288 RIOK1Q9BRS2 568 aaKnown RBP13.88□□□□□ -0.19
MARK3-201ENST00000216288 ADGRG1Q9Y653 693 aa13.88□□□□□ -0.19
MARK3-201ENST00000216288 COL4A1P02462 1669 aa13.88□□□□□ -0.19
MARK3-201ENST00000216288 MYH2Q9UKX2 1941 aa13.88□□□□□ -0.19
MARK3-201ENST00000216288 CCP110O43303 1012 aa13.88□□□□□ -0.19
MARK3-201ENST00000216288 CAMTA2O94983 1202 aa13.88□□□□□ -0.19
MARK3-201ENST00000216288 NPY5RQ15761 445 aa13.88□□□□□ -0.19
MARK3-201ENST00000216288 TICAM2Q86XR7 235 aa13.88□□□□□ -0.19
MARK3-201ENST00000216288 SLC44A5Q8NCS7 719 aa13.88□□□□□ -0.19
MARK3-201ENST00000216288 PHF20Q9BVI0 1012 aa13.88□□□□□ -0.19
MARK3-201ENST00000216288 CEP131Q9UPN4 1083 aa13.88□□□□□ -0.19
MARK3-201ENST00000216288 MYH7P12883 1935 aa13.88□□□□□ -0.19
MARK3-201ENST00000216288 TSPY2A6NKD2 308 aa13.87□□□□□ -0.19
MARK3-201ENST00000216288 MRPS25P82663 173 aaKnown RBP13.87□□□□□ -0.19
MARK3-201ENST00000216288 FUT2Q10981 343 aa13.87□□□□□ -0.19
MARK3-201ENST00000216288 KRT31Q15323 416 aa13.87□□□□□ -0.19
MARK3-201ENST00000216288 SPATA1Q5VX52 437 aa13.87□□□□□ -0.19
MARK3-201ENST00000216288 NCAPH2Q6IBW4 605 aa13.87□□□□□ -0.19
MARK3-201ENST00000216288 HDAC6Q9UBN7 1215 aa13.87□□□□□ -0.19
MARK3-201ENST00000216288 ADD3Q9UEY8 706 aaKnown RBP13.87□□□□□ -0.19
MARK3-201ENST00000216288 DACH1Q9UI36 760 aa13.87□□□□□ -0.19
MARK3-201ENST00000216288 ATRNO75882 1429 aa13.87□□□□□ -0.19
MARK3-201ENST00000216288 TAF1P21675 1872 aa13.87□□□□□ -0.19
MARK3-201ENST00000216288 NKRFO15226 690 aaKnown RBP eCLIP13.87□□□□□ -0.19
MARK3-201ENST00000216288 N4BP1O75113 896 aaKnown RBP13.87□□□□□ -0.19
MARK3-201ENST00000216288 XBP1P17861 261 aa13.87□□□□□ -0.19
MARK3-201ENST00000216288 PMS1P54277 932 aaKnown RBP13.87□□□□□ -0.19
MARK3-201ENST00000216288 ERVK-24P63145 666 aa13.87□□□□□ -0.19
MARK3-201ENST00000216288 HPS3Q969F9 1004 aa13.87□□□□□ -0.19
MARK3-201ENST00000216288 GUCA1BQ9UMX6 200 aa13.87□□□□□ -0.19
MARK3-201ENST00000216288 BCL9O00512 1426 aa13.87□□□□□ -0.19
MARK3-201ENST00000216288 FAM205AQ6ZU69 1335 aa13.87□□□□□ -0.19
MARK3-201ENST00000216288 TOGARAM1Q9Y4F4 1720 aa13.87□□□□□ -0.19
MARK3-201ENST00000216288 SRGAP2O75044 1071 aa13.87□□□□□ -0.19
MARK3-201ENST00000216288 ZMYND10O75800 440 aa13.87□□□□□ -0.19
MARK3-201ENST00000216288 NTSR2O95665 410 aa13.87□□□□□ -0.19
MARK3-201ENST00000216288 SMC1AQ14683 1233 aaKnown RBP13.87□□□□□ -0.19
MARK3-201ENST00000216288 NT5DC1Q5TFE4 455 aa13.87□□□□□ -0.19
MARK3-201ENST00000216288 ANKRD18AQ8IVF6 992 aa13.87□□□□□ -0.19
MARK3-201ENST00000216288 FAM84BQ96KN1 310 aaPredicted RBP13.87□□□□□ -0.19
MARK3-201ENST00000216288 PNKPQ96T60 521 aa13.87□□□□□ -0.19
MARK3-201ENST00000216288 RNF26Q9BY78 433 aaPredicted RBP13.87□□□□□ -0.19
MARK3-201ENST00000216288 FAM53CQ9NYF3 392 aa13.87□□□□□ -0.19
MARK3-201ENST00000216288 ERVV-1B6SEH8 477 aa13.86□□□□□ -0.19
MARK3-201ENST00000216288 GNAT2P19087 354 aa13.86□□□□□ -0.19
MARK3-201ENST00000216288 CHMP4BP1P59074 171 aa13.86□□□□□ -0.19
MARK3-201ENST00000216288 MECOMQ03112 1051 aa13.86□□□□□ -0.19
MARK3-201ENST00000216288 CTCFLQ8NI51 663 aaPredicted RBP13.86□□□□□ -0.19
MARK3-201ENST00000216288 MCM9Q9NXL9 1143 aa13.86□□□□□ -0.19
MARK3-201ENST00000216288 BAZ2AQ9UIF9 1905 aaKnown RBP13.86□□□□□ -0.19
MARK3-201ENST00000216288 USP17L3A6NCW0 530 aa13.86□□□□□ -0.19
MARK3-201ENST00000216288 USP17L4A6NCW7 530 aa13.86□□□□□ -0.19
MARK3-201ENST00000216288 KCNJ6P48051 423 aa13.86□□□□□ -0.19
MARK3-201ENST00000216288 TYW1BQ6NUM6 668 aa13.86□□□□□ -0.19
MARK3-201ENST00000216288 USP17L1Q7RTZ2 530 aa13.86□□□□□ -0.19
MARK3-201ENST00000216288 TMTC2Q8N394 836 aa13.86□□□□□ -0.19
MARK3-201ENST00000216288 NELFBQ8WX92 580 aa13.86□□□□□ -0.19
MARK3-201ENST00000216288 CAPZA3Q96KX2 299 aa13.86□□□□□ -0.19
MARK3-201ENST00000216288 VAT1LQ9HCJ6 419 aa13.86□□□□□ -0.19
MARK3-201ENST00000216288 PNPLA7Q6ZV29 1317 aa13.85□□□□□ -0.19
MARK3-201ENST00000216288 SPEF2Q9C093 1822 aa13.85□□□□□ -0.19
MARK3-201ENST00000216288 H3BQF6 201 aa13.85□□□□□ -0.19
MARK3-201ENST00000216288 MFAP3LO75121 409 aa13.85□□□□□ -0.19
MARK3-201ENST00000216288 KRT9P35527 623 aa13.85□□□□□ -0.19
MARK3-201ENST00000216288 KLK7P49862 253 aa13.85□□□□□ -0.19
MARK3-201ENST00000216288 HNRNPH2P55795 449 aaKnown RBP13.85□□□□□ -0.19
MARK3-201ENST00000216288 UBXN1Q04323 297 aa13.85□□□□□ -0.19
MARK3-201ENST00000216288 ARFGAP3Q9NP61 516 aa13.85□□□□□ -0.19
MARK3-201ENST00000216288 SRP68Q9UHB9 627 aaKnown RBP13.85□□□□□ -0.19
MARK3-201ENST00000216288 SAP30BPQ9UHR5 308 aaKnown RBP13.85□□□□□ -0.19
MARK3-201ENST00000216288 MINPP1Q9UNW1 487 aa13.85□□□□□ -0.19
MARK3-201ENST00000216288 COL1A1P02452 1464 aaPredicted RBP13.85□□□□□ -0.19
MARK3-201ENST00000216288 UBR2Q8IWV8 1755 aa13.85□□□□□ -0.19
MARK3-201ENST00000216288 KIF5CO60282 957 aa13.85□□□□□ -0.19
MARK3-201ENST00000216288 PRCPP42785 496 aa13.85□□□□□ -0.19
MARK3-201ENST00000216288 DIXDC1Q155Q3 683 aa13.85□□□□□ -0.19
MARK3-201ENST00000216288 CAVIN4Q5BKX8 364 aa13.85□□□□□ -0.19
MARK3-201ENST00000216288 FKBP15Q5T1M5 1219 aa13.85□□□□□ -0.19
MARK3-201ENST00000216288 TMEM60Q9H2L4 133 aa13.85□□□□□ -0.19
MARK3-201ENST00000216288 KCTD19Q17RG1 926 aaPredicted RBP13.84□□□□□ -0.19
MARK3-201ENST00000216288 LONRF2Q1L5Z9 754 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms