RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 RBM25P49756 843 aaKnown RBP23.7■■□□□ 1.38
RHBDD3-201ENST00000216085 SH3D19Q5HYK7 790 aa23.7■■□□□ 1.38
RHBDD3-201ENST00000216085 OTUD7BQ6GQQ9 843 aa23.7■■□□□ 1.38
RHBDD3-201ENST00000216085 GADL1Q6ZQY3 521 aa23.7■■□□□ 1.38
RHBDD3-201ENST00000216085 CHST3Q7LGC8 479 aa23.7■■□□□ 1.38
RHBDD3-201ENST00000216085 ENAHQ8N8S7 591 aaPredicted RBP23.7■■□□□ 1.38
RHBDD3-201ENST00000216085 A0A1W2PRG0 241 aa23.69■■□□□ 1.38
RHBDD3-201ENST00000216085 NOVP48745 357 aa23.69■■□□□ 1.38
RHBDD3-201ENST00000216085 LRRC47Q8N1G4 583 aaKnown RBP23.69■■□□□ 1.38
RHBDD3-201ENST00000216085 TMTC2Q8N394 836 aa23.69■■□□□ 1.38
RHBDD3-201ENST00000216085 MS4A4AQ96JQ5 239 aa23.69■■□□□ 1.38
RHBDD3-201ENST00000216085 VCPKMTQ9H867 229 aa23.69■■□□□ 1.38
RHBDD3-201ENST00000216085 MYH4Q9Y623 1939 aa23.68■■□□□ 1.38
RHBDD3-201ENST00000216085 ANTXR2P58335 489 aa23.68■■□□□ 1.38
RHBDD3-201ENST00000216085 KIF23Q02241 960 aaPredicted RBP23.68■■□□□ 1.38
RHBDD3-201ENST00000216085 PABPC4Q13310 644 aaKnown RBP eCLIP23.68■■□□□ 1.38
RHBDD3-201ENST00000216085 RUFY3Q7L099 469 aa23.68■■□□□ 1.38
RHBDD3-201ENST00000216085 SIAH1Q8IUQ4 282 aa23.68■■□□□ 1.38
RHBDD3-201ENST00000216085 NKX2-3Q8TAU0 364 aa23.68■■□□□ 1.38
RHBDD3-201ENST00000216085 ANKS1AQ92625 1134 aa23.68■■□□□ 1.38
RHBDD3-201ENST00000216085 C12orf42Q96LP6 360 aa23.68■■□□□ 1.38
RHBDD3-201ENST00000216085 ZSWIM6Q9HCJ5 1215 aa23.68■■□□□ 1.38
RHBDD3-201ENST00000216085 RPS6KB1P23443 525 aa23.68■■□□□ 1.38
RHBDD3-201ENST00000216085 GMCL1P1Q8NEA9 526 aa23.68■■□□□ 1.38
RHBDD3-201ENST00000216085 IL17RAQ96F46 866 aa23.68■■□□□ 1.38
RHBDD3-201ENST00000216085 TMEM47Q9BQJ4 181 aa23.68■■□□□ 1.38
RHBDD3-201ENST00000216085 AOC2O75106 756 aa23.67■■□□□ 1.38
RHBDD3-201ENST00000216085 NFXL1Q6ZNB6 911 aa23.67■■□□□ 1.38
RHBDD3-201ENST00000216085 TESPA1A2RU30 521 aaPredicted RBP23.66■■□□□ 1.38
RHBDD3-201ENST00000216085 EXOSC10Q01780 885 aaKnown RBP23.66■■□□□ 1.38
RHBDD3-201ENST00000216085 SEC23AQ15436 765 aa23.66■■□□□ 1.38
RHBDD3-201ENST00000216085 RCSD1Q6JBY9 416 aa23.66■■□□□ 1.38
RHBDD3-201ENST00000216085 PTPRFP10586 1907 aa23.66■■□□□ 1.38
RHBDD3-201ENST00000216085 CCDC69A6NI79 296 aa23.65■■□□□ 1.38
RHBDD3-201ENST00000216085 F5H6K3 240 aa23.65■■□□□ 1.38
RHBDD3-201ENST00000216085 SH2B2O14492 632 aaPredicted RBP23.65■■□□□ 1.38
RHBDD3-201ENST00000216085 WDR46O15213 610 aaKnown RBP23.65■■□□□ 1.38
RHBDD3-201ENST00000216085 LIFRP42702 1097 aa23.65■■□□□ 1.38
RHBDD3-201ENST00000216085 KLRC3Q07444 240 aa23.65■■□□□ 1.38
RHBDD3-201ENST00000216085 PNMA1Q8ND90 353 aa23.65■■□□□ 1.38
RHBDD3-201ENST00000216085 BRI3BPQ8WY22 251 aa23.65■■□□□ 1.38
RHBDD3-201ENST00000216085 TBC1D32Q96NH3 1257 aa23.65■■□□□ 1.38
RHBDD3-201ENST00000216085 EMILIN3Q9NT22 766 aa23.65■■□□□ 1.38
RHBDD3-201ENST00000216085 AGTPBP1Q9UPW5 1226 aa23.65■■□□□ 1.38
RHBDD3-201ENST00000216085 VCAM1P19320 739 aa23.65■■□□□ 1.38
RHBDD3-201ENST00000216085 ANKRD23Q86SG2 305 aa23.65■■□□□ 1.38
RHBDD3-201ENST00000216085 IGDCC4Q8TDY8 1250 aa23.65■■□□□ 1.38
RHBDD3-201ENST00000216085 UPF3BQ9BZI7 483 aaKnown RBP23.65■■□□□ 1.38
RHBDD3-201ENST00000216085 ZCCHC17Q9NP64 241 aaKnown RBP23.65■■□□□ 1.38
RHBDD3-201ENST00000216085 PNMA3Q9UL41 463 aa23.65■■□□□ 1.38
RHBDD3-201ENST00000216085 LOC285556D6RIA3 1793 aa23.64■■□□□ 1.38
RHBDD3-201ENST00000216085 TM4SF4P48230 202 aa23.64■■□□□ 1.37
RHBDD3-201ENST00000216085 SLFN13Q68D06 897 aa23.64■■□□□ 1.37
RHBDD3-201ENST00000216085 CATIPQ7Z7H3 387 aa23.64■■□□□ 1.37
RHBDD3-201ENST00000216085 SPICE1Q8N0Z3 855 aa23.64■■□□□ 1.37
RHBDD3-201ENST00000216085 LRRC2Q9BYS8 371 aa23.64■■□□□ 1.37
RHBDD3-201ENST00000216085 LY9Q9HBG7 655 aa23.64■■□□□ 1.37
RHBDD3-201ENST00000216085 ISY1Q9ULR0 285 aaKnown RBP23.64■■□□□ 1.37
RHBDD3-201ENST00000216085 THSD7BQ9C0I4 1608 aa23.64■■□□□ 1.37
RHBDD3-201ENST00000216085 NDUFB10O96000 172 aa23.63■■□□□ 1.37
RHBDD3-201ENST00000216085 ALDH1A1P00352 501 aa23.63■■□□□ 1.37
RHBDD3-201ENST00000216085 SYNE3Q6ZMZ3 975 aa23.63■■□□□ 1.37
RHBDD3-201ENST00000216085 IL27Q8NEV9 243 aa23.63■■□□□ 1.37
RHBDD3-201ENST00000216085 TCEANC2Q96MN5 208 aa23.63■■□□□ 1.37
RHBDD3-201ENST00000216085 SLC45A1Q9Y2W3 748 aa23.63■■□□□ 1.37
RHBDD3-201ENST00000216085 CPA1P15085 419 aa23.63■■□□□ 1.37
RHBDD3-201ENST00000216085 SLC1A4P43007 532 aa23.63■■□□□ 1.37
RHBDD3-201ENST00000216085 Q6ZUG5 572 aa23.63■■□□□ 1.37
RHBDD3-201ENST00000216085 IFNL1Q8IU54 200 aa23.63■■□□□ 1.37
RHBDD3-201ENST00000216085 DCAF4Q8WV16 495 aa23.63■■□□□ 1.37
RHBDD3-201ENST00000216085 GMCL1Q96IK5 515 aa23.63■■□□□ 1.37
RHBDD3-201ENST00000216085 PDRG1Q9NUG6 133 aa23.63■■□□□ 1.37
RHBDD3-201ENST00000216085 MTMR7Q9Y216 660 aa23.63■■□□□ 1.37
RHBDD3-201ENST00000216085 OSBPP22059 807 aa23.62■■□□□ 1.37
RHBDD3-201ENST00000216085 TANGO6Q9C0B7 1094 aa23.62■■□□□ 1.37
RHBDD3-201ENST00000216085 RPAP3Q9H6T3 665 aaPredicted RBP23.62■■□□□ 1.37
RHBDD3-201ENST00000216085 SLC12A7Q9Y666 1083 aa23.62■■□□□ 1.37
RHBDD3-201ENST00000216085 USP17L15C9J2P7 530 aa23.61■■□□□ 1.37
RHBDD3-201ENST00000216085 BTBD19C9JJ37 291 aa23.61■■□□□ 1.37
RHBDD3-201ENST00000216085 USP17L13C9JLJ4 530 aa23.61■■□□□ 1.37
RHBDD3-201ENST00000216085 USP17L11C9JVI0 530 aa23.61■■□□□ 1.37
RHBDD3-201ENST00000216085 USP17L18D6R9N7 530 aa23.61■■□□□ 1.37
RHBDD3-201ENST00000216085 USP17L22D6RA61 530 aa23.61■■□□□ 1.37
RHBDD3-201ENST00000216085 USP17L17D6RBQ6 530 aa23.61■■□□□ 1.37
RHBDD3-201ENST00000216085 USP17L19D6RCP7 530 aa23.61■■□□□ 1.37
RHBDD3-201ENST00000216085 USP17L20D6RJB6 530 aa23.61■■□□□ 1.37
RHBDD3-201ENST00000216085 IRX3P78415 501 aaPredicted RBP23.61■■□□□ 1.37
RHBDD3-201ENST00000216085 MAP2K1Q02750 393 aaPredicted RBP23.61■■□□□ 1.37
RHBDD3-201ENST00000216085 USP17L24Q0WX57 530 aa23.61■■□□□ 1.37
RHBDD3-201ENST00000216085 DGKZQ13574 1117 aa23.61■■□□□ 1.37
RHBDD3-201ENST00000216085 MOGSQ13724 837 aa23.61■■□□□ 1.37
RHBDD3-201ENST00000216085 SGMS1Q86VZ5 419 aa23.61■■□□□ 1.37
RHBDD3-201ENST00000216085 FBXL16Q8N461 479 aa23.61■■□□□ 1.37
RHBDD3-201ENST00000216085 ZIC5Q96T25 663 aa23.61■■□□□ 1.37
RHBDD3-201ENST00000216085 PDHXO00330 501 aa23.6■■□□□ 1.37
RHBDD3-201ENST00000216085 DDAH1O94760 285 aa23.6■■□□□ 1.37
RHBDD3-201ENST00000216085 CALM1P0DP23 149 aa23.6■■□□□ 1.37
RHBDD3-201ENST00000216085 CALM2P0DP24 149 aa23.6■■□□□ 1.37
RHBDD3-201ENST00000216085 CALM3P0DP25 149 aa23.6■■□□□ 1.37
RHBDD3-201ENST00000216085 RABEP1Q15276 862 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms