RNA–Protein interactions for RNA: ENST00000183605.9

CLDN18-201, Transcript of claudin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLDN18, Length 3,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-201ENST00000183605 ALS2CR12Q96Q35 445 aa11.27□□□□□ -0.61
CLDN18-201ENST00000183605 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.27□□□□□ -0.61
CLDN18-201ENST00000183605 PTPN12Q05209 780 aaKnown RBP11.26□□□□□ -0.61
CLDN18-201ENST00000183605 GRIN1Q05586 938 aa11.26□□□□□ -0.61
CLDN18-201ENST00000183605 KRT31Q15323 416 aa11.26□□□□□ -0.61
CLDN18-201ENST00000183605 CPLX4Q7Z7G2 160 aa11.26□□□□□ -0.61
CLDN18-201ENST00000183605 OSBP2Q969R2 916 aa11.26□□□□□ -0.61
CLDN18-201ENST00000183605 KAZALD1Q96I82 304 aa11.26□□□□□ -0.61
CLDN18-201ENST00000183605 CSRNP2Q9H175 543 aa11.26□□□□□ -0.61
CLDN18-201ENST00000183605 ADD3Q9UEY8 706 aaKnown RBP11.26□□□□□ -0.61
CLDN18-201ENST00000183605 SALL1Q9NSC2 1324 aa11.26□□□□□ -0.61
CLDN18-201ENST00000183605 COL15A1P39059 1388 aa11.26□□□□□ -0.61
CLDN18-201ENST00000183605 ANKRD26Q9UPS8 1709 aa11.26□□□□□ -0.61
CLDN18-201ENST00000183605 KCNJ18B7U540 433 aa11.26□□□□□ -0.61
CLDN18-201ENST00000183605 PRPF6O94906 941 aaKnown RBP11.26□□□□□ -0.61
CLDN18-201ENST00000183605 RNASE9P60153 205 aaKnown RBP11.26□□□□□ -0.61
CLDN18-201ENST00000183605 ERVK-24P63145 666 aa11.26□□□□□ -0.61
CLDN18-201ENST00000183605 CYP27A1Q02318 531 aa11.26□□□□□ -0.61
CLDN18-201ENST00000183605 KCNJ12Q14500 433 aa11.26□□□□□ -0.61
CLDN18-201ENST00000183605 KCNV1Q6PIU1 500 aa11.26□□□□□ -0.61
CLDN18-201ENST00000183605 RIPOR2Q9Y4F9 1068 aa11.26□□□□□ -0.61
CLDN18-201ENST00000183605 METP08581 1390 aa11.26□□□□□ -0.61
CLDN18-201ENST00000183605 A1BGP04217 495 aa11.26□□□□□ -0.61
CLDN18-201ENST00000183605 PPARAQ07869 468 aa11.26□□□□□ -0.61
CLDN18-201ENST00000183605 CMTR1Q8N1G2 835 aaKnown RBP11.26□□□□□ -0.61
CLDN18-201ENST00000183605 ARL8AQ96BM9 186 aa11.26□□□□□ -0.61
CLDN18-201ENST00000183605 RRP36Q96EU6 259 aaKnown RBP11.26□□□□□ -0.61
CLDN18-201ENST00000183605 PPP1R12BO60237 982 aaPredicted RBP11.25□□□□□ -0.61
CLDN18-201ENST00000183605 ZMYM6O95789 1325 aa11.25□□□□□ -0.61
CLDN18-201ENST00000183605 PDE6BP35913 854 aa11.25□□□□□ -0.61
CLDN18-201ENST00000183605 MTIF2P46199 727 aaKnown RBP11.25□□□□□ -0.61
CLDN18-201ENST00000183605 SEC24CP53992 1094 aa11.25□□□□□ -0.61
CLDN18-201ENST00000183605 PAK1Q13153 545 aa11.25□□□□□ -0.61
CLDN18-201ENST00000183605 USP49Q70CQ1 688 aa11.25□□□□□ -0.61
CLDN18-201ENST00000183605 PNMA8AQ86V59 439 aaPredicted RBP11.25□□□□□ -0.61
CLDN18-201ENST00000183605 ANKRD18BA2A2Z9 1011 aa11.25□□□□□ -0.61
CLDN18-201ENST00000183605 TARSL2A2RTX5 802 aaKnown RBP11.25□□□□□ -0.61
CLDN18-201ENST00000183605 BUB1BO60566 1050 aaPredicted RBP11.25□□□□□ -0.61
CLDN18-201ENST00000183605 KRT14P02533 472 aa11.25□□□□□ -0.61
CLDN18-201ENST00000183605 IGKV5-2P06315 115 aa11.25□□□□□ -0.61
CLDN18-201ENST00000183605 MYBL2P10244 700 aa11.25□□□□□ -0.61
CLDN18-201ENST00000183605 GPTP24298 496 aa11.25□□□□□ -0.61
CLDN18-201ENST00000183605 EPHB4P54760 987 aa11.25□□□□□ -0.61
CLDN18-201ENST00000183605 PTPAQ15257 358 aa11.25□□□□□ -0.61
CLDN18-201ENST00000183605 AKAP4Q5JQC9 854 aa11.25□□□□□ -0.61
CLDN18-201ENST00000183605 ARFGAP2Q8N6H7 521 aa11.25□□□□□ -0.61
CLDN18-201ENST00000183605 ZNF594Q96JF6 807 aaPredicted RBP11.25□□□□□ -0.61
CLDN18-201ENST00000183605 PCDHB6Q9Y5E3 794 aa11.25□□□□□ -0.61
CLDN18-201ENST00000183605 PLEKHG3A1L390 1219 aa11.25□□□□□ -0.61
CLDN18-201ENST00000183605 GPAA1O43292 621 aa11.25□□□□□ -0.61
CLDN18-201ENST00000183605 ZPR1O75312 459 aa11.25□□□□□ -0.61
CLDN18-201ENST00000183605 PAX7P23759 505 aa11.25□□□□□ -0.61
CLDN18-201ENST00000183605 NR5A1Q13285 461 aa11.25□□□□□ -0.61
CLDN18-201ENST00000183605 CCDC50Q8IVM0 306 aa11.25□□□□□ -0.61
CLDN18-201ENST00000183605 NELFBQ8WX92 580 aa11.25□□□□□ -0.61
CLDN18-201ENST00000183605 EPSTI1Q96J88 318 aa11.25□□□□□ -0.61
CLDN18-201ENST00000183605 ZKSCAN3Q9BRR0 538 aa11.25□□□□□ -0.61
CLDN18-201ENST00000183605 LRRC1Q9BTT6 524 aa11.25□□□□□ -0.61
CLDN18-201ENST00000183605 NR1D1P20393 614 aa11.24□□□□□ -0.61
CLDN18-201ENST00000183605 ZKSCAN4Q969J2 545 aaPredicted RBP11.24□□□□□ -0.61
CLDN18-201ENST00000183605 ZFYP08048 801 aaPredicted RBP11.24□□□□□ -0.61
CLDN18-201ENST00000183605 ZNF174Q15697 407 aa11.24□□□□□ -0.61
CLDN18-201ENST00000183605 RTN1Q16799 776 aa11.24□□□□□ -0.61
CLDN18-201ENST00000183605 CCDC57Q2TAC2 916 aa11.24□□□□□ -0.61
CLDN18-201ENST00000183605 NAIF1Q69YI7 327 aaPredicted RBP11.24□□□□□ -0.61
CLDN18-201ENST00000183605 APOA5Q6Q788 366 aa11.24□□□□□ -0.61
CLDN18-201ENST00000183605 TRAPPC11Q7Z392 1133 aa11.24□□□□□ -0.61
CLDN18-201ENST00000183605 IFT20Q8IY31 132 aa11.24□□□□□ -0.61
CLDN18-201ENST00000183605 PRPF38AQ8NAV1 312 aaKnown RBP11.24□□□□□ -0.61
CLDN18-201ENST00000183605 CCDC47Q96A33 483 aaKnown RBP11.24□□□□□ -0.61
CLDN18-201ENST00000183605 AGXT2Q9BYV1 514 aa11.24□□□□□ -0.61
CLDN18-201ENST00000183605 NBPF3Q9H094 633 aa11.24□□□□□ -0.61
CLDN18-201ENST00000183605 HPS5Q9UPZ3 1129 aa11.24□□□□□ -0.61
CLDN18-201ENST00000183605 NEDD4P46934 1319 aa11.24□□□□□ -0.61
CLDN18-201ENST00000183605 RNMTO43148 476 aaKnown RBP11.23□□□□□ -0.61
CLDN18-201ENST00000183605 PTPREP23469 700 aa11.23□□□□□ -0.61
CLDN18-201ENST00000183605 IL15P40933 162 aaPredicted RBP11.23□□□□□ -0.61
CLDN18-201ENST00000183605 TBC1D8BQ0IIM8 1120 aa11.23□□□□□ -0.61
CLDN18-201ENST00000183605 PPP1R7Q15435 360 aa11.23□□□□□ -0.61
CLDN18-201ENST00000183605 ENOX2Q16206 610 aaKnown RBP11.23□□□□□ -0.61
CLDN18-201ENST00000183605 ALS2CLQ60I27 953 aa11.23□□□□□ -0.61
CLDN18-201ENST00000183605 TEX11Q8IYF3 940 aa11.23□□□□□ -0.61
CLDN18-201ENST00000183605 ANKRD13CQ8N6S4 541 aa11.23□□□□□ -0.61
CLDN18-201ENST00000183605 MICAL1Q8TDZ2 1067 aa11.23□□□□□ -0.61
CLDN18-201ENST00000183605 METTL22Q9BUU2 404 aaPredicted RBP11.23□□□□□ -0.61
CLDN18-201ENST00000183605 TBC1D2BQ9UPU7 963 aa11.23□□□□□ -0.61
CLDN18-201ENST00000183605 LSP1P33241 339 aa11.23□□□□□ -0.61
CLDN18-201ENST00000183605 EZH2Q15910 746 aaKnown RBP11.23□□□□□ -0.61
CLDN18-201ENST00000183605 TDRD12Q587J7 1177 aaKnown RBP11.23□□□□□ -0.61
CLDN18-201ENST00000183605 TACO1Q9BSH4 297 aaKnown RBP11.23□□□□□ -0.61
CLDN18-201ENST00000183605 NAPBQ9H115 298 aa11.23□□□□□ -0.61
CLDN18-201ENST00000183605 TTC26A0AVF1 554 aa11.23□□□□□ -0.61
CLDN18-201ENST00000183605 GCFC2P16383 781 aaKnown RBP11.23□□□□□ -0.61
CLDN18-201ENST00000183605 GUCY2DQ02846 1103 aa11.23□□□□□ -0.61
CLDN18-201ENST00000183605 NAA35Q5VZE5 725 aa11.23□□□□□ -0.61
CLDN18-201ENST00000183605 ZNF473Q8WTR7 871 aaKnown RBP11.23□□□□□ -0.61
CLDN18-201ENST00000183605 MIEF2Q96C03 454 aa11.23□□□□□ -0.61
CLDN18-201ENST00000183605 CCT8L2Q96SF2 557 aa11.23□□□□□ -0.61
CLDN18-201ENST00000183605 SLC40A1Q9NP59 571 aa11.23□□□□□ -0.61
CLDN18-201ENST00000183605 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms