RNA–Protein interactions for RNA: ENST00000081029.7

MRPS35-201, Transcript of mitochondrial ribosomal protein S35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS35, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-201ENST00000081029 MTMR4Q9NYA4 1195 aa12.46□□□□□ -0.42
MRPS35-201ENST00000081029 CPA4Q9UI42 421 aa12.46□□□□□ -0.42
MRPS35-201ENST00000081029 ISY1Q9ULR0 285 aaKnown RBP12.46□□□□□ -0.42
MRPS35-201ENST00000081029 GPR25O00155 361 aa12.45□□□□□ -0.42
MRPS35-201ENST00000081029 TTLL1O95922 423 aa12.45□□□□□ -0.42
MRPS35-201ENST00000081029 OSBPP22059 807 aa12.45□□□□□ -0.42
MRPS35-201ENST00000081029 MCCP23508 829 aa12.45□□□□□ -0.42
MRPS35-201ENST00000081029 TRDNQ13061 729 aa12.45□□□□□ -0.42
MRPS35-201ENST00000081029 PABPC4Q13310 644 aaKnown RBP eCLIP12.45□□□□□ -0.428e-42■■■■□ 24.2
MRPS35-201ENST00000081029 LRRC47Q8N1G4 583 aaKnown RBP12.45□□□□□ -0.42
MRPS35-201ENST00000081029 NKX2-3Q8TAU0 364 aa12.45□□□□□ -0.42
MRPS35-201ENST00000081029 PARK7Q99497 189 aaKnown RBP12.45□□□□□ -0.42
MRPS35-201ENST00000081029 IL17RBQ9NRM6 502 aa12.45□□□□□ -0.42
MRPS35-201ENST00000081029 TMX2Q9Y320 296 aa12.45□□□□□ -0.42
MRPS35-201ENST00000081029 FGRP09769 529 aa12.44□□□□□ -0.42
MRPS35-201ENST00000081029 VCAM1P19320 739 aa12.44□□□□□ -0.42
MRPS35-201ENST00000081029 ANAPC15P60006 121 aa12.44□□□□□ -0.42
MRPS35-201ENST00000081029 KIAA1755Q5JYT7 1200 aa12.44□□□□□ -0.42
MRPS35-201ENST00000081029 ZNF296Q8WUU4 475 aaPredicted RBP12.44□□□□□ -0.42
MRPS35-201ENST00000081029 TANGO6Q9C0B7 1094 aa12.44□□□□□ -0.42
MRPS35-201ENST00000081029 ASCC2Q9H1I8 757 aaPredicted RBP12.44□□□□□ -0.42
MRPS35-201ENST00000081029 RPAP3Q9H6T3 665 aaPredicted RBP12.44□□□□□ -0.42
MRPS35-201ENST00000081029 GOPCQ9HD26 462 aa12.44□□□□□ -0.42
MRPS35-201ENST00000081029 TAF6LQ9Y6J9 622 aa12.44□□□□□ -0.42
MRPS35-201ENST00000081029 TLR2O60603 784 aa12.44□□□□□ -0.42
MRPS35-201ENST00000081029 PCP11498 1178 aaKnown RBP12.44□□□□□ -0.42
MRPS35-201ENST00000081029 KRT23Q9C075 422 aa12.44□□□□□ -0.42
MRPS35-201ENST00000081029 VCPKMTQ9H867 229 aa12.44□□□□□ -0.42
MRPS35-201ENST00000081029 ZCCHC17Q9NP64 241 aaKnown RBP12.44□□□□□ -0.42
MRPS35-201ENST00000081029 ZSWIM5Q9P217 1185 aa12.44□□□□□ -0.42
MRPS35-201ENST00000081029 NYAP2Q9P242 653 aa12.44□□□□□ -0.42
MRPS35-201ENST00000081029 PNMA3Q9UL41 463 aa12.44□□□□□ -0.42
MRPS35-201ENST00000081029 PTPRFP10586 1907 aa12.44□□□□□ -0.42
MRPS35-201ENST00000081029 CASP8AP2Q9UKL3 1982 aa12.43□□□□□ -0.42
MRPS35-201ENST00000081029 IGKV6D-41A0A0C4DH26 115 aa12.43□□□□□ -0.42
MRPS35-201ENST00000081029 E7EWF7 191 aa12.43□□□□□ -0.42
MRPS35-201ENST00000081029 F5H6K3 240 aa12.43□□□□□ -0.42
MRPS35-201ENST00000081029 CD2BP2O95400 341 aaKnown RBP12.43□□□□□ -0.42
MRPS35-201ENST00000081029 KLRC3Q07444 240 aa12.43□□□□□ -0.42
MRPS35-201ENST00000081029 RALYLQ86SE5 291 aaKnown RBP12.43□□□□□ -0.42
MRPS35-201ENST00000081029 NUP88Q99567 741 aaPredicted RBP12.43□□□□□ -0.42
MRPS35-201ENST00000081029 P2RX7Q99572 595 aaKnown RBP12.43□□□□□ -0.42
MRPS35-201ENST00000081029 CNNM2Q9H8M5 875 aa12.43□□□□□ -0.42
MRPS35-201ENST00000081029 USP17L15C9J2P7 530 aa12.42□□□□□ -0.42
MRPS35-201ENST00000081029 USP17L13C9JLJ4 530 aa12.42□□□□□ -0.42
MRPS35-201ENST00000081029 USP17L11C9JVI0 530 aa12.42□□□□□ -0.42
MRPS35-201ENST00000081029 USP17L18D6R9N7 530 aa12.42□□□□□ -0.42
MRPS35-201ENST00000081029 USP17L22D6RA61 530 aa12.42□□□□□ -0.42
MRPS35-201ENST00000081029 USP17L17D6RBQ6 530 aa12.42□□□□□ -0.42
MRPS35-201ENST00000081029 USP17L19D6RCP7 530 aa12.42□□□□□ -0.42
MRPS35-201ENST00000081029 USP17L20D6RJB6 530 aa12.42□□□□□ -0.42
MRPS35-201ENST00000081029 SLC27A2O14975 620 aa12.42□□□□□ -0.42
MRPS35-201ENST00000081029 FKTNO75072 461 aa12.42□□□□□ -0.42
MRPS35-201ENST00000081029 USP17L24Q0WX57 530 aa12.42□□□□□ -0.42
MRPS35-201ENST00000081029 NECTIN1Q15223 517 aa12.42□□□□□ -0.42
MRPS35-201ENST00000081029 CREB3L3Q68CJ9 461 aa12.42□□□□□ -0.42
MRPS35-201ENST00000081029 CHST3Q7LGC8 479 aa12.42□□□□□ -0.42
MRPS35-201ENST00000081029 IQCA1Q86XH1 822 aa12.42□□□□□ -0.42
MRPS35-201ENST00000081029 HSCBQ8IWL3 235 aa12.42□□□□□ -0.42
MRPS35-201ENST00000081029 RASEFQ8IZ41 740 aa12.42□□□□□ -0.42
MRPS35-201ENST00000081029 ANKRD13CQ8N6S4 541 aa12.42□□□□□ -0.42
MRPS35-201ENST00000081029 KCNB2Q92953 911 aa12.42□□□□□ -0.42
MRPS35-201ENST00000081029 SLC45A1Q9Y2W3 748 aa12.42□□□□□ -0.42
MRPS35-201ENST00000081029 PEX10O60683 326 aa12.42□□□□□ -0.42
MRPS35-201ENST00000081029 FLOT1O75955 427 aa12.42□□□□□ -0.42
MRPS35-201ENST00000081029 HOXA7P31268 230 aaPredicted RBP12.42□□□□□ -0.42
MRPS35-201ENST00000081029 SP3Q02447 781 aa12.42□□□□□ -0.42
MRPS35-201ENST00000081029 FAM83BQ5T0W9 1011 aa12.42□□□□□ -0.42
MRPS35-201ENST00000081029 RNF20Q5VTR2 975 aa12.42□□□□□ -0.42
MRPS35-201ENST00000081029 CATSPERGQ6ZRH7 1159 aa12.42□□□□□ -0.42
MRPS35-201ENST00000081029 NCOA7Q8NI08 942 aa12.42□□□□□ -0.42
MRPS35-201ENST00000081029 LPAR1Q92633 364 aa12.42□□□□□ -0.42
MRPS35-201ENST00000081029 C12orf42Q96LP6 360 aa12.42□□□□□ -0.42
MRPS35-201ENST00000081029 UBAC1Q9BSL1 405 aa12.42□□□□□ -0.42
MRPS35-201ENST00000081029 PAGR1Q9BTK6 254 aa12.42□□□□□ -0.42
MRPS35-201ENST00000081029 SNX14Q9Y5W7 946 aa12.42□□□□□ -0.42
MRPS35-201ENST00000081029 NDUFB10O96000 172 aa12.41□□□□□ -0.42
MRPS35-201ENST00000081029 PPP4R3BQ5MIZ7 849 aa12.41□□□□□ -0.42
MRPS35-201ENST00000081029 SLFN13Q68D06 897 aa12.41□□□□□ -0.42
MRPS35-201ENST00000081029 STOX1Q6ZVD7 989 aa12.41□□□□□ -0.42
MRPS35-201ENST00000081029 MKL1Q969V6 931 aa12.41□□□□□ -0.42
MRPS35-201ENST00000081029 ZSCAN10Q96SZ4 725 aaPredicted RBP12.41□□□□□ -0.42
MRPS35-201ENST00000081029 CFHR5Q9BXR6 569 aa12.41□□□□□ -0.42
MRPS35-201ENST00000081029 ZKSCAN1P17029 563 aaPredicted RBP12.4□□□□□ -0.42
MRPS35-201ENST00000081029 HERVK_113P62684 666 aa12.4□□□□□ -0.42
MRPS35-201ENST00000081029 IKQ13123 557 aaPredicted RBP12.4□□□□□ -0.42
MRPS35-201ENST00000081029 COG2Q14746 738 aa12.4□□□□□ -0.42
MRPS35-201ENST00000081029 COL13A1Q5TAT6 717 aaPredicted RBP12.4□□□□□ -0.42
MRPS35-201ENST00000081029 C17orf99Q6UX52 265 aa12.4□□□□□ -0.42
MRPS35-201ENST00000081029 CYB5R4Q7L1T6 521 aa12.4□□□□□ -0.42
MRPS35-201ENST00000081029 CD99L2Q8TCZ2 262 aa12.4□□□□□ -0.42
MRPS35-201ENST00000081029 TMEM47Q9BQJ4 181 aa12.4□□□□□ -0.42
MRPS35-201ENST00000081029 TCP11L1Q9NUJ3 509 aa12.4□□□□□ -0.42
MRPS35-201ENST00000081029 PLIN4Q96Q06 1357 aa12.4□□□□□ -0.42
MRPS35-201ENST00000081029 WDR46O15213 610 aaKnown RBP12.4□□□□□ -0.42
MRPS35-201ENST00000081029 TOP1P11387 765 aaKnown RBP12.4□□□□□ -0.42
MRPS35-201ENST00000081029 SLC1A4P43007 532 aa12.4□□□□□ -0.42
MRPS35-201ENST00000081029 NEK4P51957 841 aa12.4□□□□□ -0.42
MRPS35-201ENST00000081029 KIF22Q14807 665 aa12.4□□□□□ -0.42
MRPS35-201ENST00000081029 PRDM10Q9NQV6 1147 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms