RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Gm4297D3YWB7 211 aa15.38■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Nxf2Q4ZGD8 691 aa15.38■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Rbm12b2Q66JV4 834 aaKnown RBP15.38■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Csrnp1P59054 583 aa15.38■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Acot10Q32MW3 439 aa15.38■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Caps2Q8BUG5 550 aa15.38■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Ror2Q9Z138 944 aa15.38■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Ssh2Q5SW75 1423 aa15.38■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Krt18P05784 423 aa15.38■□□□□ 0.05
Col3a1-201ENSMUST00000087883 PhbP67778 272 aaKnown RBP15.38■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Crybg3Q80W49 1005 aa15.38■□□□□ 0.05
Col3a1-201ENSMUST00000087883 VrtnQ3SYK4 740 aa15.38■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Cnga4Q3UW12 575 aa15.38■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Ccdc92bQ5SUE3 299 aa15.38■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Cdc23Q8BGZ4 597 aa15.38■□□□□ 0.05
Col3a1-201ENSMUST00000087883 CutaQ9CQ89 177 aa15.38■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Taf12Q8VE65 161 aa15.37■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Saal1Q9D2C2 474 aa15.37■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Drc3Q9D5E4 523 aa15.37■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Pla2r1Q62028 1487 aa15.37■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Daam2Q80U19 1115 aa15.37■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Bola2Q8BGS2 86 aa15.37■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Slc8a1P70414 970 aa15.37■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Ppp2r5eQ61151 467 aa15.37■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Cfap36Q8C6E0 343 aa15.37■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Lzts2Q91YU6 671 aa15.37■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Atg3Q9CPX6 314 aa15.37■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Cyp26a1O55127 497 aa15.37■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Esco1Q69Z69 843 aa15.37■□□□□ 0.05
Col3a1-201ENSMUST00000087883 1700113H08RikE9Q9Q5 327 aa15.36■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Serpinb6eI7HJI3 429 aa15.36■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Dab2P98078 766 aa15.36■□□□□ 0.05
Col3a1-201ENSMUST00000087883 4930449I24RikQ9D5E3 319 aa15.36■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Armc3A2AU72 881 aa15.36■□□□□ 0.05
Col3a1-201ENSMUST00000087883 CopeO89079 308 aa15.36■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Adora1Q60612 326 aa15.36■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Cdca7lQ922M5 438 aa15.36■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Ttc14Q9CSP9 761 aa15.36■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Fam217aQ9D9W6 419 aa15.36■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Serpini1O35684 410 aa15.36■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Nuf2Q99P69 463 aa15.36■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Taf7lQ9D3R9 471 aa15.36■□□□□ 0.05
Col3a1-201ENSMUST00000087883 NxnP97346 435 aa15.36■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Gucy2fQ5SDA5 1108 aa15.36■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Krt12Q64291 487 aa15.36■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Xab2Q9DCD2 855 aaKnown RBP15.36■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Pard3Q99NH2 1333 aa15.36■□□□□ 0.05
Col3a1-201ENSMUST00000087883 WaplQ65Z40 1200 aaKnown RBP15.35■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Dnajc17Q91WT4 303 aa15.35■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Pcdha12Q91Y18 950 aa15.35■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Clic4Q9QYB1 253 aa15.35■□□□□ 0.05
Col3a1-201ENSMUST00000087883 RcvrnP34057 202 aa15.35■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Nom1Q3UFM5 854 aaKnown RBP15.35■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Efcab14Q8BGQ6 484 aa15.35■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Cabs1Q8C633 391 aa15.35■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Rbm42Q91V81 474 aaKnown RBP15.35■□□□□ 0.05
Col3a1-201ENSMUST00000087883 CaluO35887 315 aa15.35■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Nhej1Q3KNJ2 295 aa15.35■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Gdap1l1Q8VE33 370 aa15.35■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Gm10488Q4KL05 212 aa15.35■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Tsr1Q5SWD9 803 aa15.35■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Ccdc125Q5U465 500 aa15.35■□□□□ 0.05
Col3a1-201ENSMUST00000087883 HarsQ61035 509 aa15.35■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Gm14819Q62478 212 aa15.35■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Kctd6Q8BNL5 237 aa15.35■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Rint1Q8BZ36 792 aa15.35■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Lmnb2P21619 596 aaKnown RBP15.35■□□□□ 0.05
Col3a1-201ENSMUST00000087883 S100a5P63084 93 aa15.35■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Dzip3Q7TPV2 1204 aa15.35■□□□□ 0.05
Col3a1-201ENSMUST00000087883 PxdnQ3UQ28 1475 aa15.34■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Ddb1Q3U1J4 1140 aaKnown RBP15.34■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Abhd8Q8R0P8 439 aa15.34■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Wbp11Q923D5 641 aaKnown RBP15.34■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Rfwd2Q9R1A8 733 aaKnown RBP15.34■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Ubn2Q80WC1 1314 aa15.34■□□□□ 0.05
Col3a1-201ENSMUST00000087883 PalldQ9ET54 1408 aa15.34■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Apol11aE9PZG0 334 aa15.34■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Ppfia2Q8BSS9 1257 aa15.34■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Lrrc8cQ8R502 803 aa15.34■□□□□ 0.05
Col3a1-201ENSMUST00000087883 RtcbQ99LF4 505 aaKnown RBP15.34■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Zcchc17Q9ESX4 241 aaKnown RBP15.34■□□□□ 0.05
Col3a1-201ENSMUST00000087883 MefvQ9JJ26 767 aa15.34■□□□□ 0.05
Col3a1-201ENSMUST00000087883 H2-OaQ9QWV1 250 aa15.34■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Pacsin2Q9WVE8 486 aaKnown RBP15.34■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Anxa1P10107 346 aaKnown RBP15.34■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Nlrx1Q3TL44 975 aa15.34■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Armc2Q3URY6 854 aa15.34■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Ankrd13cQ3UX43 541 aa15.34■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Cpsf1Q9EPU4 1441 aaKnown RBP15.34■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Kcnk16G5E845 292 aa15.34■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Pkp1P97350 728 aaKnown RBP15.34■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Atp8a2P98200 1148 aa15.34■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Copb1Q9JIF7 953 aa15.34■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Atf2P16951 487 aaKnown RBP15.33■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Rad17Q6NXW6 688 aa15.33■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Naa35Q6PHQ8 725 aa15.33■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Cnot10Q8BH15 744 aa15.33■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Trim60Q8VI40 466 aa15.33■□□□□ 0.05
Col3a1-201ENSMUST00000087883 Tom1l1Q923U0 474 aa15.33■□□□□ 0.05
Col3a1-201ENSMUST00000087883 AW822073A0A0N4SUK1 652 aa15.33■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 31.7 ms