RNA–Protein interactions for RNA: ENSMUST00000077689.13

Ssh1-201, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 3,164 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-201ENSMUST00000077689 Ugt1a6bK9J7B2 531 aa12.81□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Pola2P33611 600 aa12.81□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Tbc1d2bQ3U0J8 965 aa12.81□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Phc1Q64028 1012 aa12.81□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Ugt1a6Q64435 531 aa12.81□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Ugt1a7cQ6ZQM8 531 aa12.81□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Tubb2aQ7TMM9 445 aa12.81□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Spag7Q7TNE3 227 aaKnown RBP12.81□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Ccdc172Q810N9 267 aa12.81□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Srek1Q8BZX4 494 aaKnown RBP12.81□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Vmn1r218Q8R261 298 aa12.81□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Gigyf1Q99MR1 1044 aaKnown RBP12.81□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Tubb2bQ9CWF2 445 aa12.81□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Sf3a3Q9D554 501 aaKnown RBP12.81□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Cul5Q9D5V5 780 aa12.81□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Atp12aQ9Z1W8 1035 aa12.81□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Vstm4T1NXB5 319 aa12.81□□□□□ -0.36
Ssh1-201ENSMUST00000077689 PsdQ5DTT2 1024 aa12.8□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Fnbp1Q80TY0 616 aa12.8□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Dhx38Q80X98 1228 aa12.8□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Iffo1Q8BXL9 562 aa12.8□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Matr3Q8K310 846 aaKnown RBP12.8□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Stk38Q91VJ4 465 aa12.8□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Tc2nQ91XT6 489 aa12.8□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Ctnnbl1Q9CWL8 563 aaKnown RBP12.8□□□□□ -0.36
Ssh1-201ENSMUST00000077689 LratQ9JI60 231 aa12.8□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Odf2A3KGV1 830 aaKnown RBP12.8□□□□□ -0.36
Ssh1-201ENSMUST00000077689 MafgO54790 162 aa12.8□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Mdm2P23804 489 aa12.8□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Stat1P42225 749 aa12.8□□□□□ -0.36
Ssh1-201ENSMUST00000077689 TraddQ3U0V2 310 aa12.8□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Gas2l3Q3UWW6 683 aa12.8□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Mks1Q5SW45 561 aa12.8□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Sugp1Q8CH02 643 aaKnown RBP12.8□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Tmem221Q8K071 230 aa12.8□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Phldb2Q8K1N2 1249 aa12.8□□□□□ -0.36
Ssh1-201ENSMUST00000077689 AslQ91YI0 464 aa12.8□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Nsmce1Q9D720 266 aa12.8□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Ak2Q9WTP6 239 aa12.8□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Unc13bQ9Z1N9 1602 aa12.8□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Tpm3-rs7D3Z2H9 248 aa12.79□□□□□ -0.36
Ssh1-201ENSMUST00000077689 MaeaQ4VC33 396 aa12.79□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Rgl2Q61193 778 aa12.79□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Utp14bQ6EJB6 756 aaKnown RBP12.79□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Sash3Q8K352 380 aa12.79□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Nup133Q8R0G9 1155 aa12.79□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Scrn1Q9CZC8 414 aa12.79□□□□□ -0.36
Ssh1-201ENSMUST00000077689 GgcxQ9QYC7 757 aa12.79□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Psma5Q9Z2U1 241 aaKnown RBP12.79□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Carmil3Q3UFQ8 1375 aa12.79□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Gm28510A0A087WP28 240 aa12.79□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Casp4P70343 373 aa12.79□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Yipf3Q3UDR8 347 aa12.79□□□□□ -0.36
Ssh1-201ENSMUST00000077689 RalylQ8BTF8 293 aa12.79□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Cfap53Q9D439 514 aa12.79□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Sept14Q9DA97 430 aa12.79□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Hsd3b7Q9EQC1 369 aa12.79□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Pfkfb3A7UAK5 555 aa12.79□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Nr1i2O54915 431 aa12.79□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Cyp26a1O55127 497 aa12.79□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Gnat3Q3V3I2 354 aa12.79□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Tbx2Q60707 711 aa12.79□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Ankzf1Q80UU1 748 aaKnown RBP12.79□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Tmem87bQ8BKU8 555 aa12.79□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Zfp202Q8C879 641 aa12.79□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Pcdhga10Q91XY9 930 aa12.79□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Pcdha5Q91Y15 934 aa12.79□□□□□ -0.36
Ssh1-201ENSMUST00000077689 MypnQ5DTJ9 1315 aa12.78□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Phldb3E9QAF4 648 aa12.78□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Nkx2-5P42582 318 aa12.78□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Mrps31Q61733 384 aaKnown RBP12.78□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Trim37Q6PCX9 961 aa12.78□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Rec8Q8C5S7 591 aa12.78□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Ino80bQ99PT3 375 aaKnown RBP12.78□□□□□ -0.36
Ssh1-201ENSMUST00000077689 4933428M09RikQ9D3X3 192 aa12.78□□□□□ -0.36
Ssh1-201ENSMUST00000077689 CenphQ9QYM8 241 aa12.78□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Nfs1Q9Z1J3 459 aa12.78□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Itga9B8JK39 1036 aa12.78□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Ccdc6D3YZP9 469 aa12.78□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Speer2E9Q9U2 264 aa12.78□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Clcn6O35454 870 aa12.78□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Ptpn20O55082 426 aa12.78□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Pth1rP41593 591 aa12.78□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Krt86P97861 486 aa12.78□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Tcp11Q01755 566 aa12.78□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Trmt1Q3TX08 663 aa12.78□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Cyfip2Q5SQX6 1253 aa12.78□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Nlrp9bQ66X22 1003 aa12.78□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Ripor2Q80U16 1078 aa12.78□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Lrrc45Q8CIM1 670 aa12.78□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Eps8l2Q99K30 729 aa12.78□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Klhl40Q9D783 621 aa12.78□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Arpc5lQ9D898 153 aa12.78□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Akap8lQ9R0L7 642 aaKnown RBP12.78□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Siglec1Q62230 1695 aa12.78□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Ebf2O08792 575 aa12.77□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Arhgap6O54834 987 aa12.77□□□□□ -0.36
Ssh1-201ENSMUST00000077689 M6prP24668 278 aa12.77□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Ell2Q3UKU1 639 aa12.77□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Ccdc160Q3UYG1 323 aa12.77□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 22.4 ms