RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Ppp1r13bQ62415 1087 aa25.45■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Bank1Q80VH0 783 aa25.45■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 Enox2Q8R0Z2 598 aa25.45■■□□□ 1.67
Sh3rf1-201ENSMUST00000034060 IkbkgO88522 412 aa25.45■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 S100a5P63084 93 aa25.45■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Nxf2Q4ZGD8 691 aa25.45■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Nod2Q8K3Z0 1020 aa25.45■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Trim42Q9D2H5 723 aa25.45■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Klc4Q9DBS5 619 aa25.45■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Abcb6Q9DC29 842 aa25.45■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Azi2Q9QYP6 405 aa25.45■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Hfm1D3Z4R1 1434 aa25.45■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 YwhaeP62259 255 aaKnown RBP25.45■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Znf76Q8BMU0 568 aa25.45■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Copb1Q9JIF7 953 aa25.45■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Zbtb45Q52KG4 520 aa25.44■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Vps37bQ8R0J7 285 aa25.44■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Pcdhb5Q91XZ5 792 aa25.44■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Dctpp1Q9QY93 170 aa25.44■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Erich3F6QRE9 1637 aa25.44■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Prl3d1P18121 224 aa25.44■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Tspyl1O88852 379 aa25.44■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Lrrc36Q3V0M2 755 aa25.44■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Myl10Q62082 202 aa25.44■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Nlrp9aQ66X03 949 aa25.44■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Lrrc8cQ8R502 803 aa25.44■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Sorbs3Q9R1Z8 733 aa25.44■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Cyp2j7A0A140T8U1 504 aa25.44■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Eid1Q9DCR4 169 aa25.44■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Tfcp2Q9ERA0 502 aa25.44■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Stat2Q9WVL2 923 aa25.44■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Rabgap1A2AWA9 1064 aa25.43■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Mettl14Q3UIK4 456 aa25.43■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Rbm41Q8JZV4 413 aa25.43■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Lrp2bpQ9D4C6 346 aa25.43■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Skap1Q3UUV5 355 aa25.43■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Pls1Q3V0K9 630 aa25.43■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 DgkiD3YWQ0 1071 aa25.43■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Adcy8P97490 1249 aa25.43■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Panx2Q6IMP4 677 aa25.43■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 HomezQ80W88 542 aa25.43■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Cst12Q9DAN8 128 aa25.43■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 EspnlQ3UYR4 1005 aa25.43■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Atad2Q8CDM1 1040 aa25.43■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Fam114a2Q8VE88 497 aa25.43■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 MgarpQ8VI64 283 aa25.43■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Pcdha12Q91Y18 950 aa25.43■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 1700020D05RikQ99PB1 294 aa25.43■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Haus6Q6NV99 933 aaKnown RBP25.42■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Naa30Q8CES0 364 aa25.42■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Nr1i2O54915 431 aa25.42■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Krt9Q6RHW0 743 aa25.42■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Daam2Q80U19 1115 aa25.42■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Tsc1Q9EP53 1161 aa25.42■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 H2afzP0C0S6 128 aa25.41■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Bach1P97302 739 aa25.41■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 H2afvQ3THW5 128 aa25.41■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Nlrp4cQ3TKR3 982 aa25.41■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Nr1d1Q3UV55 615 aa25.41■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Kif22Q3V300 660 aa25.41■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Mum1l1Q4VA55 681 aa25.41■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Spats2lQ91WJ7 558 aaKnown RBP25.41■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Cog7Q3UM29 770 aa25.41■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 E330017A01RikQ8BU47 192 aa25.41■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 EhhadhQ9DBM2 718 aa25.41■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Rhpn1Q61085 643 aa25.41■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Krt12Q64291 487 aa25.41■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Ncoa7Q6DFV7 943 aa25.41■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 GopcQ8BH60 463 aa25.41■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Tmem60Q8K174 133 aa25.41■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Gm20425E9Q035 978 aaKnown RBP25.41■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 SrprbP47758 269 aa25.41■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Zfp113Q8C689 439 aa25.41■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Gcc2Q8CHG3 1679 aa25.41■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Mast1Q9R1L5 1570 aa25.4■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Atf2P16951 487 aaKnown RBP25.4■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Rbm42Q91V81 474 aaKnown RBP25.4■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Rps6ka2Q9WUT3 733 aa25.4■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 AnkarA2RT91 1465 aa25.4■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Map3k19E9Q3S4 1311 aa25.4■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Col20a1Q923P0 1320 aa25.4■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Dzip3Q7TPV2 1204 aa25.4■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Dnm3Q8BZ98 863 aa25.4■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Dtnbp1Q91WZ8 352 aa25.4■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Spdl1Q923A2 608 aa25.4■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Parp2O88554 559 aa25.4■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Oxsr1Q6P9R2 527 aa25.4■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Caps2Q8BUG5 550 aa25.4■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Mterf4Q8BVN4 346 aa25.4■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Cyp26b1Q811W2 512 aa25.4■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Cyp26a1O55127 497 aa25.4■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Gna15P30678 374 aa25.4■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Micall2Q3TN34 1009 aa25.4■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Prkab2Q6PAM0 271 aa25.4■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Taf5lQ91WQ5 589 aa25.4■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Nrbp1Q99J45 535 aa25.4■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Adgrb2Q8CGM1 1561 aa25.39■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Clec16aQ80U30 1036 aa25.39■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Bola2Q8BGS2 86 aa25.39■■□□□ 1.66
Sh3rf1-201ENSMUST00000034060 Esr2O08537 530 aa25.39■■□□□ 1.66
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms