RNA–Protein interactions for RNA: ENSMUST00000032962.10

Cln3-201, Transcript of Battenin, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Cln3, Length 2,386 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3-201ENSMUST00000032962 Atad2Q8CDM1 1040 aa13.47□□□□□ -0.25
Cln3-201ENSMUST00000032962 Ddx41Q91VN6 622 aaKnown RBP13.47□□□□□ -0.25
Cln3-201ENSMUST00000032962 Tomm22Q9CPQ3 142 aa13.47□□□□□ -0.25
Cln3-201ENSMUST00000032962 Ddx20Q9JJY4 825 aaKnown RBP13.47□□□□□ -0.25
Cln3-201ENSMUST00000032962 Cnpy2Q9QXT0 182 aa13.47□□□□□ -0.25
Cln3-201ENSMUST00000032962 Ccdc112A0AUP1 442 aa13.46□□□□□ -0.25
Cln3-201ENSMUST00000032962 Casp12O08736 419 aa13.46□□□□□ -0.25
Cln3-201ENSMUST00000032962 Sema3fO88632 785 aa13.46□□□□□ -0.25
Cln3-201ENSMUST00000032962 Exosc10P56960 887 aaKnown RBP13.46□□□□□ -0.25
Cln3-201ENSMUST00000032962 Eya3P97480 510 aa13.46□□□□□ -0.25
Cln3-201ENSMUST00000032962 Zkscan4Q5SZT6 480 aa13.46□□□□□ -0.25
Cln3-201ENSMUST00000032962 Lamc2Q61092 1191 aa13.46□□□□□ -0.25
Cln3-201ENSMUST00000032962 GnptabQ69ZN6 1235 aa13.46□□□□□ -0.25
Cln3-201ENSMUST00000032962 Tmem59lQ7TNI2 337 aa13.46□□□□□ -0.25
Cln3-201ENSMUST00000032962 Cnksr2Q80YA9 1032 aa13.46□□□□□ -0.25
Cln3-201ENSMUST00000032962 Slu7Q8BHJ9 585 aa13.46□□□□□ -0.25
Cln3-201ENSMUST00000032962 Cep55Q8BT07 462 aa13.46□□□□□ -0.25
Cln3-201ENSMUST00000032962 Dnaaf4Q8R368 420 aa13.46□□□□□ -0.25
Cln3-201ENSMUST00000032962 CenpqQ9CPQ5 267 aa13.46□□□□□ -0.25
Cln3-201ENSMUST00000032962 Snw1Q9CSN1 536 aaKnown RBP13.46□□□□□ -0.25
Cln3-201ENSMUST00000032962 TbcaP48428 108 aaKnown RBP13.46□□□□□ -0.25
Cln3-201ENSMUST00000032962 Frat1P70339 274 aa13.46□□□□□ -0.25
Cln3-201ENSMUST00000032962 Qrich1Q3UA37 777 aa13.46□□□□□ -0.25
Cln3-201ENSMUST00000032962 Tmprss11eQ5S248 423 aa13.46□□□□□ -0.25
Cln3-201ENSMUST00000032962 Senp6Q6P7W0 1132 aa13.46□□□□□ -0.25
Cln3-201ENSMUST00000032962 Trpv1Q704Y3 839 aa13.46□□□□□ -0.25
Cln3-201ENSMUST00000032962 Cdca8Q8BHX3 289 aa13.46□□□□□ -0.25
Cln3-201ENSMUST00000032962 Creld2Q9CYA0 350 aa13.46□□□□□ -0.25
Cln3-201ENSMUST00000032962 B3galt4Q9Z0F0 371 aa13.46□□□□□ -0.25
Cln3-201ENSMUST00000032962 Myh6Q02566 1938 aaKnown RBP13.46□□□□□ -0.25
Cln3-201ENSMUST00000032962 Prr16A3KMN5 304 aa13.45□□□□□ -0.26
Cln3-201ENSMUST00000032962 Sept2P42208 361 aaKnown RBP13.45□□□□□ -0.26
Cln3-201ENSMUST00000032962 CebpaP53566 359 aa13.45□□□□□ -0.26
Cln3-201ENSMUST00000032962 Rrp1P56183 494 aaKnown RBP13.45□□□□□ -0.26
Cln3-201ENSMUST00000032962 1700013D24RikQ0P521 120 aa13.45□□□□□ -0.26
Cln3-201ENSMUST00000032962 Mdh1bQ5F204 500 aa13.45□□□□□ -0.26
Cln3-201ENSMUST00000032962 Fxr1Q61584 677 aaKnown RBP13.45□□□□□ -0.26
Cln3-201ENSMUST00000032962 Nlgn2Q69ZK9 836 aa13.45□□□□□ -0.26
Cln3-201ENSMUST00000032962 Dhx40Q6PE54 779 aaKnown RBP13.45□□□□□ -0.26
Cln3-201ENSMUST00000032962 QarsQ8BML9 775 aa13.45□□□□□ -0.26
Cln3-201ENSMUST00000032962 CrebrfQ8CDG5 640 aaKnown RBP13.45□□□□□ -0.26
Cln3-201ENSMUST00000032962 Ints4Q8CIM8 964 aa13.45□□□□□ -0.26
Cln3-201ENSMUST00000032962 OplahQ8K010 1288 aa13.45□□□□□ -0.26
Cln3-201ENSMUST00000032962 Dusp10Q9ESS0 483 aa13.45□□□□□ -0.26
Cln3-201ENSMUST00000032962 Ltbp2O08999 1813 aa13.45□□□□□ -0.26
Cln3-201ENSMUST00000032962 Vmn2r68L7N2B3 851 aa13.45□□□□□ -0.26
Cln3-201ENSMUST00000032962 Ttll12Q3UDE2 639 aa13.45□□□□□ -0.26
Cln3-201ENSMUST00000032962 PaoxQ8C0L6 504 aa13.45□□□□□ -0.26
Cln3-201ENSMUST00000032962 Terb1Q8C0V1 768 aa13.45□□□□□ -0.26
Cln3-201ENSMUST00000032962 Alg3Q8K2A8 438 aa13.45□□□□□ -0.26
Cln3-201ENSMUST00000032962 Krt84Q99M73 603 aa13.45□□□□□ -0.26
Cln3-201ENSMUST00000032962 Rbm6S4R1W5 1118 aaKnown RBP13.45□□□□□ -0.26
Cln3-201ENSMUST00000032962 Ces1hD3Z298 562 aa13.44□□□□□ -0.26
Cln3-201ENSMUST00000032962 Alppl2P24823 529 aa13.44□□□□□ -0.26
Cln3-201ENSMUST00000032962 Brip1Q5SXJ3 1174 aa13.44□□□□□ -0.26
Cln3-201ENSMUST00000032962 Nxf7Q80SZ6 620 aaKnown RBP13.44□□□□□ -0.26
Cln3-201ENSMUST00000032962 Epha10Q8BYG9 1007 aa13.44□□□□□ -0.26
Cln3-201ENSMUST00000032962 Pus7lQ8CE46 702 aa13.44□□□□□ -0.26
Cln3-201ENSMUST00000032962 Trex1Q91XB0 314 aa13.44□□□□□ -0.26
Cln3-201ENSMUST00000032962 Mrpl44Q9CY73 333 aaKnown RBP13.44□□□□□ -0.26
Cln3-201ENSMUST00000032962 Vps33aQ9D2N9 598 aa13.44□□□□□ -0.26
Cln3-201ENSMUST00000032962 4930548H24RikQ9D496 437 aa13.44□□□□□ -0.26
Cln3-201ENSMUST00000032962 Clip2Q9Z0H8 1047 aa13.44□□□□□ -0.26
Cln3-201ENSMUST00000032962 Surf1P09925 306 aa13.44□□□□□ -0.26
Cln3-201ENSMUST00000032962 Zhx1P70121 873 aa13.44□□□□□ -0.26
Cln3-201ENSMUST00000032962 Ccdc84Q4VA36 332 aaKnown RBP13.44□□□□□ -0.26
Cln3-201ENSMUST00000032962 Gm11437Q5QR91 290 aa13.44□□□□□ -0.26
Cln3-201ENSMUST00000032962 Stxbp2Q64324 593 aa13.44□□□□□ -0.26
Cln3-201ENSMUST00000032962 Mapk4Q6P5G0 583 aa13.44□□□□□ -0.26
Cln3-201ENSMUST00000032962 Angel2Q8K1C0 544 aa13.44□□□□□ -0.26
Cln3-201ENSMUST00000032962 Lrrc2Q8VDB8 371 aa13.44□□□□□ -0.26
Cln3-201ENSMUST00000032962 Zkscan5Q9Z1D8 819 aa13.44□□□□□ -0.26
Cln3-201ENSMUST00000032962 Atp2b1G5E829 1220 aa13.43□□□□□ -0.26
Cln3-201ENSMUST00000032962 Slc27a3O88561 667 aa13.43□□□□□ -0.26
Cln3-201ENSMUST00000032962 Anks1aP59672 1150 aa13.43□□□□□ -0.26
Cln3-201ENSMUST00000032962 Irf6P97431 467 aa13.43□□□□□ -0.26
Cln3-201ENSMUST00000032962 Adgre1Q61549 931 aa13.43□□□□□ -0.26
Cln3-201ENSMUST00000032962 Lrrc15Q80X72 579 aa13.43□□□□□ -0.26
Cln3-201ENSMUST00000032962 Q8BZJ8 459 aa13.43□□□□□ -0.26
Cln3-201ENSMUST00000032962 Golph3lQ8R088 285 aaKnown RBP13.43□□□□□ -0.26
Cln3-201ENSMUST00000032962 Med23Q80YQ2 1367 aa13.43□□□□□ -0.26
Cln3-201ENSMUST00000032962 Lama3Q61789 3330 aa13.43□□□□□ -0.26
Cln3-201ENSMUST00000032962 Fam186bD3Z420 943 aa13.43□□□□□ -0.26
Cln3-201ENSMUST00000032962 Oog1E9Q5G7 496 aa13.43□□□□□ -0.26
Cln3-201ENSMUST00000032962 Hap1O35668 628 aa13.43□□□□□ -0.26
Cln3-201ENSMUST00000032962 Ess2O70279 479 aa13.43□□□□□ -0.26
Cln3-201ENSMUST00000032962 Llgl2Q3TJ91 1027 aa13.43□□□□□ -0.26
Cln3-201ENSMUST00000032962 Ankrd13cQ3UX43 541 aa13.43□□□□□ -0.26
Cln3-201ENSMUST00000032962 Atp1a3Q6PIC6 1013 aa13.43□□□□□ -0.26
Cln3-201ENSMUST00000032962 Phf20Q8BLG0 1010 aaKnown RBP13.43□□□□□ -0.26
Cln3-201ENSMUST00000032962 Slc4a8Q8JZR6 1089 aa13.43□□□□□ -0.26
Cln3-201ENSMUST00000032962 Odf2lQ9D478 642 aa13.43□□□□□ -0.26
Cln3-201ENSMUST00000032962 Fzd9Q9R216 592 aa13.43□□□□□ -0.26
Cln3-201ENSMUST00000032962 Plxnb2B2RXS4 1842 aa13.42□□□□□ -0.26
Cln3-201ENSMUST00000032962 Cyp26a1O55127 497 aa13.42□□□□□ -0.26
Cln3-201ENSMUST00000032962 PgfP49764 158 aa13.42□□□□□ -0.26
Cln3-201ENSMUST00000032962 Tll1Q62381 1013 aa13.42□□□□□ -0.26
Cln3-201ENSMUST00000032962 Fsd1Q7TPM6 496 aa13.42□□□□□ -0.26
Cln3-201ENSMUST00000032962 Gpatch3Q8BIY1 525 aa13.42□□□□□ -0.26
Cln3-201ENSMUST00000032962 Epc2Q8C0I4 808 aa13.42□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 15.7 ms