RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 CHST3Q7LGC8 479 aa14.49□□□□□ -0.09
LINC00339-213ENST00000642137 MKL1Q969V6 931 aa14.49□□□□□ -0.09
LINC00339-213ENST00000642137 ZKSCAN3Q9BRR0 538 aa14.49□□□□□ -0.09
LINC00339-213ENST00000642137 UBAC1Q9BSL1 405 aa14.49□□□□□ -0.09
LINC00339-213ENST00000642137 AGXT2Q9BYV1 514 aa14.49□□□□□ -0.09
LINC00339-213ENST00000642137 TBC1D2Q9BYX2 928 aa14.49□□□□□ -0.09
LINC00339-213ENST00000642137 UPF3BQ9BZI7 483 aaKnown RBP14.49□□□□□ -0.09
LINC00339-213ENST00000642137 PICK1Q9NRD5 415 aa14.49□□□□□ -0.09
LINC00339-213ENST00000642137 PDRG1Q9NUG6 133 aa14.49□□□□□ -0.09
LINC00339-213ENST00000642137 MTMR4Q9NYA4 1195 aa14.49□□□□□ -0.09
LINC00339-213ENST00000642137 NYAP2Q9P242 653 aa14.49□□□□□ -0.09
LINC00339-213ENST00000642137 ATAD5Q96QE3 1844 aa14.48□□□□□ -0.09
LINC00339-213ENST00000642137 USP17L5A8MUK1 530 aa14.48□□□□□ -0.09
LINC00339-213ENST00000642137 PTPRAP18433 802 aa14.48□□□□□ -0.09
LINC00339-213ENST00000642137 LIFRP42702 1097 aa14.48□□□□□ -0.09
LINC00339-213ENST00000642137 VGLL4Q14135 290 aa14.48□□□□□ -0.09
LINC00339-213ENST00000642137 RAB3GAP1Q15042 981 aa14.48□□□□□ -0.09
LINC00339-213ENST00000642137 SEC23AQ15436 765 aa14.48□□□□□ -0.09
LINC00339-213ENST00000642137 SLC10A4Q96EP9 437 aa14.48□□□□□ -0.09
LINC00339-213ENST00000642137 CEP95Q96GE4 821 aa14.48□□□□□ -0.09
LINC00339-213ENST00000642137 SNCAIPQ9Y6H5 919 aa14.48□□□□□ -0.09
LINC00339-213ENST00000642137 TNKSO95271 1327 aa14.47□□□□□ -0.09
LINC00339-213ENST00000642137 DOCK1Q14185 1865 aa14.47□□□□□ -0.09
LINC00339-213ENST00000642137 SH2B2O14492 632 aaPredicted RBP14.47□□□□□ -0.09
LINC00339-213ENST00000642137 NMT2O60551 498 aa14.47□□□□□ -0.09
LINC00339-213ENST00000642137 TTLL1O95922 423 aa14.47□□□□□ -0.09
LINC00339-213ENST00000642137 EEF2P13639 858 aaKnown RBP14.47□□□□□ -0.09
LINC00339-213ENST00000642137 WTAPQ15007 396 aa14.47□□□□□ -0.09
LINC00339-213ENST00000642137 SHROOM1Q2M3G4 852 aaPredicted RBP14.47□□□□□ -0.09
LINC00339-213ENST00000642137 TMEM67Q5HYA8 995 aa14.47□□□□□ -0.09
LINC00339-213ENST00000642137 RCSD1Q6JBY9 416 aa14.47□□□□□ -0.09
LINC00339-213ENST00000642137 Q6ZUG5 572 aa14.47□□□□□ -0.09
LINC00339-213ENST00000642137 SIAH1Q8IUQ4 282 aa14.47□□□□□ -0.09
LINC00339-213ENST00000642137 WDR18Q9BV38 432 aa14.47□□□□□ -0.09
LINC00339-213ENST00000642137 AS3MTQ9HBK9 375 aa14.47□□□□□ -0.09
LINC00339-213ENST00000642137 CLIP2Q9UDT6 1046 aa14.47□□□□□ -0.09
LINC00339-213ENST00000642137 TMEM88BA6NKF7 163 aa14.46□□□□□ -0.09
LINC00339-213ENST00000642137 TOP1P11387 765 aaKnown RBP14.46□□□□□ -0.09
LINC00339-213ENST00000642137 FGD1P98174 961 aa14.46□□□□□ -0.09
LINC00339-213ENST00000642137 ICA1Q05084 483 aa14.46□□□□□ -0.09
LINC00339-213ENST00000642137 PPATQ06203 517 aa14.46□□□□□ -0.09
LINC00339-213ENST00000642137 ANKRD1Q15327 319 aa14.46□□□□□ -0.09
LINC00339-213ENST00000642137 IFIT1BQ5T764 474 aaKnown RBP14.46□□□□□ -0.09
LINC00339-213ENST00000642137 ERO1BQ86YB8 467 aa14.46□□□□□ -0.09
LINC00339-213ENST00000642137 ENAHQ8N8S7 591 aaPredicted RBP14.46□□□□□ -0.09
LINC00339-213ENST00000642137 TCEANC2Q96MN5 208 aa14.46□□□□□ -0.09
LINC00339-213ENST00000642137 LRRC2Q9BYS8 371 aa14.46□□□□□ -0.09
LINC00339-213ENST00000642137 LY9Q9HBG7 655 aa14.46□□□□□ -0.09
LINC00339-213ENST00000642137 ARHGEF10LQ9HCE6 1279 aa14.46□□□□□ -0.09
LINC00339-213ENST00000642137 SYNPO2Q9UMS6 1093 aa14.46□□□□□ -0.09
LINC00339-213ENST00000642137 STX8Q9UNK0 236 aa14.46□□□□□ -0.09
LINC00339-213ENST00000642137 ST18O60284 1047 aa14.45□□□□□ -0.1
LINC00339-213ENST00000642137 HUNKP57058 714 aa14.45□□□□□ -0.1
LINC00339-213ENST00000642137 EVCP57679 992 aa14.45□□□□□ -0.1
LINC00339-213ENST00000642137 TOB2Q14106 344 aaPredicted RBP14.45□□□□□ -0.1
LINC00339-213ENST00000642137 SAPCD2Q86UD0 394 aa14.45□□□□□ -0.1
LINC00339-213ENST00000642137 SGMS1Q86VZ5 419 aa14.45□□□□□ -0.1
LINC00339-213ENST00000642137 ZNF280CQ8ND82 737 aa14.45□□□□□ -0.1
LINC00339-213ENST00000642137 CLMNQ96JQ2 1002 aa14.45□□□□□ -0.1
LINC00339-213ENST00000642137 TMEM47Q9BQJ4 181 aa14.45□□□□□ -0.1
LINC00339-213ENST00000642137 ELP3Q9H9T3 547 aa14.45□□□□□ -0.1
LINC00339-213ENST00000642137 TMX2Q9Y320 296 aa14.45□□□□□ -0.1
LINC00339-213ENST00000642137 AFG3L2Q9Y4W6 797 aa14.45□□□□□ -0.1
LINC00339-213ENST00000642137 TLL2Q9Y6L7 1015 aa14.45□□□□□ -0.1
LINC00339-213ENST00000642137 ZHX2Q9Y6X8 837 aa14.45□□□□□ -0.1
LINC00339-213ENST00000642137 OTOFQ9HC10 1997 aa14.45□□□□□ -0.1
LINC00339-213ENST00000642137 CCDC69A6NI79 296 aa14.44□□□□□ -0.1
LINC00339-213ENST00000642137 SPDYE5A6NIY4 337 aa14.44□□□□□ -0.1
LINC00339-213ENST00000642137 C19orf81C9J6K1 198 aa14.44□□□□□ -0.1
LINC00339-213ENST00000642137 APLP1P51693 650 aa14.44□□□□□ -0.1
LINC00339-213ENST00000642137 BRF1Q92994 677 aa14.44□□□□□ -0.1
LINC00339-213ENST00000642137 HHIPL1Q96JK4 782 aa14.44□□□□□ -0.1
LINC00339-213ENST00000642137 SH2D4AQ9H788 454 aa14.44□□□□□ -0.1
LINC00339-213ENST00000642137 KAT14Q9H8E8 782 aa14.44□□□□□ -0.1
LINC00339-213ENST00000642137 GPHNQ9NQX3 736 aaPredicted RBP14.44□□□□□ -0.1
LINC00339-213ENST00000642137 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.44□□□□□ -0.1
LINC00339-213ENST00000642137 MYH4Q9Y623 1939 aa14.44□□□□□ -0.1
LINC00339-213ENST00000642137 PHIPQ8WWQ0 1821 aa14.43□□□□□ -0.1
LINC00339-213ENST00000642137 A0A1W2PRG0 241 aa14.43□□□□□ -0.1
LINC00339-213ENST00000642137 USP17L10C9JJH3 530 aa14.43□□□□□ -0.1
LINC00339-213ENST00000642137 CXCL11O14625 94 aa14.43□□□□□ -0.1
LINC00339-213ENST00000642137 MCM2P49736 904 aa14.43□□□□□ -0.1
LINC00339-213ENST00000642137 AK2P54819 239 aa14.43□□□□□ -0.1
LINC00339-213ENST00000642137 ATP2B2Q01814 1243 aa14.43□□□□□ -0.1
LINC00339-213ENST00000642137 SPP2Q13103 211 aa14.43□□□□□ -0.1
LINC00339-213ENST00000642137 PPIL2Q13356 520 aa14.43□□□□□ -0.1
LINC00339-213ENST00000642137 RGMBQ6NW40 437 aa14.43□□□□□ -0.1
LINC00339-213ENST00000642137 SYNE3Q6ZMZ3 975 aa14.43□□□□□ -0.1
LINC00339-213ENST00000642137 NFXL1Q6ZNB6 911 aa14.43□□□□□ -0.1
LINC00339-213ENST00000642137 CCDC84Q86UT8 332 aaPredicted RBP14.43□□□□□ -0.1
LINC00339-213ENST00000642137 CLEC10AQ8IUN9 316 aa14.43□□□□□ -0.1
LINC00339-213ENST00000642137 ACER1Q8TDN7 264 aa14.43□□□□□ -0.1
LINC00339-213ENST00000642137 OPTNQ96CV9 577 aa14.43□□□□□ -0.1
LINC00339-213ENST00000642137 ZNF274Q96GC6 653 aaPredicted RBP14.43□□□□□ -0.1
LINC00339-213ENST00000642137 KIAA1683Q9H0B3 1180 aa14.43□□□□□ -0.1
LINC00339-213ENST00000642137 SENP2Q9HC62 589 aa14.43□□□□□ -0.1
LINC00339-213ENST00000642137 ECE1P42892 770 aa14.42□□□□□ -0.1
LINC00339-213ENST00000642137 USP14P54578 494 aa14.42□□□□□ -0.1
LINC00339-213ENST00000642137 BACE1P56817 501 aa14.42□□□□□ -0.1
LINC00339-213ENST00000642137 SH3D19Q5HYK7 790 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms