RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 EMILIN3Q9NT22 766 aa18.01■□□□□ 0.47
PHGDH-231ENST00000641939 ECM2O94769 699 aaPredicted RBP18■□□□□ 0.47
PHGDH-231ENST00000641939 APPP05067 770 aa18■□□□□ 0.47
PHGDH-231ENST00000641939 CTGFP29279 349 aa18■□□□□ 0.47
PHGDH-231ENST00000641939 GCLCP48506 637 aaPredicted RBP18■□□□□ 0.47
PHGDH-231ENST00000641939 USP14P54578 494 aa18■□□□□ 0.47
PHGDH-231ENST00000641939 IRX3P78415 501 aaPredicted RBP18■□□□□ 0.47
PHGDH-231ENST00000641939 TMEM179Q6ZVK1 233 aa18■□□□□ 0.47
PHGDH-231ENST00000641939 PLEKHM2Q8IWE5 1019 aa18■□□□□ 0.47
PHGDH-231ENST00000641939 CCDC17Q96LX7 622 aa18■□□□□ 0.47
PHGDH-231ENST00000641939 KIAA1683Q9H0B3 1180 aa18■□□□□ 0.47
PHGDH-231ENST00000641939 PATL2C9JE40 543 aaKnown RBP17.99■□□□□ 0.47
PHGDH-231ENST00000641939 FMNL1O95466 1100 aaPredicted RBP17.99■□□□□ 0.47
PHGDH-231ENST00000641939 HOXD10P28358 340 aa17.99■□□□□ 0.47
PHGDH-231ENST00000641939 TDO2P48775 406 aa17.99■□□□□ 0.47
PHGDH-231ENST00000641939 PRMT2P55345 433 aa17.99■□□□□ 0.47
PHGDH-231ENST00000641939 FCGRTP55899 365 aa17.99■□□□□ 0.47
PHGDH-231ENST00000641939 ZYXQ15942 572 aaKnown RBP17.99■□□□□ 0.47
PHGDH-231ENST00000641939 TICAM2Q86XR7 235 aa17.99■□□□□ 0.47
PHGDH-231ENST00000641939 ANKRD13CQ8N6S4 541 aa17.99■□□□□ 0.47
PHGDH-231ENST00000641939 ACER1Q8TDN7 264 aa17.99■□□□□ 0.47
PHGDH-231ENST00000641939 C12orf42Q96LP6 360 aa17.99■□□□□ 0.47
PHGDH-231ENST00000641939 EPB41L4AQ9HCS5 686 aaPredicted RBP17.99■□□□□ 0.47
PHGDH-231ENST00000641939 PTCH2Q9Y6C5 1203 aa17.99■□□□□ 0.47
PHGDH-231ENST00000641939 MINDY4BA8MYZ0 360 aa17.98■□□□□ 0.47
PHGDH-231ENST00000641939 TRIM6-TRIM34B2RNG4 842 aa17.98■□□□□ 0.47
PHGDH-231ENST00000641939 AKR1B1P15121 316 aa17.98■□□□□ 0.47
PHGDH-231ENST00000641939 FAM110CQ1W6H9 321 aa17.98■□□□□ 0.47
PHGDH-231ENST00000641939 IFNL3Q8IZI9 196 aa17.98■□□□□ 0.47
PHGDH-231ENST00000641939 NACAP1Q9BZK3 213 aa17.98■□□□□ 0.47
PHGDH-231ENST00000641939 OSBPL3Q9H4L5 887 aa17.98■□□□□ 0.47
PHGDH-231ENST00000641939 SRRDQ9UH36 339 aa17.98■□□□□ 0.47
PHGDH-231ENST00000641939 ROBO3Q96MS0 1386 aa17.98■□□□□ 0.47
PHGDH-231ENST00000641939 BRCA2P51587 3418 aa17.97■□□□□ 0.47
PHGDH-231ENST00000641939 SOX10P56693 466 aa17.97■□□□□ 0.47
PHGDH-231ENST00000641939 P2RX7Q99572 595 aaKnown RBP17.97■□□□□ 0.47
PHGDH-231ENST00000641939 GREB1LQ9C091 1923 aaPredicted RBP17.97■□□□□ 0.47
PHGDH-231ENST00000641939 RGS19P49795 217 aa17.96■□□□□ 0.47
PHGDH-231ENST00000641939 HERVK_113P62684 666 aa17.96■□□□□ 0.47
PHGDH-231ENST00000641939 SLC9C1Q4G0N8 1177 aa17.96■□□□□ 0.47
PHGDH-231ENST00000641939 CCDC129Q6ZRS4 1044 aa17.96■□□□□ 0.47
PHGDH-231ENST00000641939 RILPL2Q969X0 211 aa17.96■□□□□ 0.47
PHGDH-231ENST00000641939 ARMC5Q96C12 935 aa17.96■□□□□ 0.47
PHGDH-231ENST00000641939 HELLSQ9NRZ9 838 aa17.96■□□□□ 0.47
PHGDH-231ENST00000641939 MYPNQ86TC9 1320 aa17.96■□□□□ 0.46
PHGDH-231ENST00000641939 RBBP6Q7Z6E9 1792 aaKnown RBP17.95■□□□□ 0.46
PHGDH-231ENST00000641939 A0A1W2PRG0 241 aa17.95■□□□□ 0.46
PHGDH-231ENST00000641939 USP17L15C9J2P7 530 aa17.95■□□□□ 0.46
PHGDH-231ENST00000641939 USP17L13C9JLJ4 530 aa17.95■□□□□ 0.46
PHGDH-231ENST00000641939 USP17L11C9JVI0 530 aa17.95■□□□□ 0.46
PHGDH-231ENST00000641939 USP17L18D6R9N7 530 aa17.95■□□□□ 0.46
PHGDH-231ENST00000641939 USP17L22D6RA61 530 aa17.95■□□□□ 0.46
PHGDH-231ENST00000641939 USP17L17D6RBQ6 530 aa17.95■□□□□ 0.46
PHGDH-231ENST00000641939 USP17L19D6RCP7 530 aa17.95■□□□□ 0.46
PHGDH-231ENST00000641939 USP17L20D6RJB6 530 aa17.95■□□□□ 0.46
PHGDH-231ENST00000641939 VCAM1P19320 739 aa17.95■□□□□ 0.46
PHGDH-231ENST00000641939 ICA1Q05084 483 aa17.95■□□□□ 0.46
PHGDH-231ENST00000641939 USP17L24Q0WX57 530 aa17.95■□□□□ 0.46
PHGDH-231ENST00000641939 NBPF11Q86T75 865 aa17.95■□□□□ 0.46
PHGDH-231ENST00000641939 GTF3C2Q8WUA4 911 aaPredicted RBP17.95■□□□□ 0.46
PHGDH-231ENST00000641939 NAPBQ9H115 298 aa17.95■□□□□ 0.46
PHGDH-231ENST00000641939 MKNK2Q9HBH9 465 aa17.95■□□□□ 0.46
PHGDH-231ENST00000641939 ARHGEF10LQ9HCE6 1279 aa17.95■□□□□ 0.46
PHGDH-231ENST00000641939 MORF4L1Q9UBU8 362 aa17.95■□□□□ 0.46
PHGDH-231ENST00000641939 MYH4Q9Y623 1939 aa17.94■□□□□ 0.46
PHGDH-231ENST00000641939 TNPO2O14787 897 aaKnown RBP17.94■□□□□ 0.46
PHGDH-231ENST00000641939 RASA1P20936 1047 aa17.94■□□□□ 0.46
PHGDH-231ENST00000641939 CLEC10AQ8IUN9 316 aa17.94■□□□□ 0.46
PHGDH-231ENST00000641939 SIAH1Q8IUQ4 282 aa17.94■□□□□ 0.46
PHGDH-231ENST00000641939 STK11IPQ8N1F8 1099 aa17.94■□□□□ 0.46
PHGDH-231ENST00000641939 RAET1EQ8TD07 263 aa17.94■□□□□ 0.46
PHGDH-231ENST00000641939 FAM227BQ96M60 508 aa17.94■□□□□ 0.46
PHGDH-231ENST00000641939 SH2D4AQ9H788 454 aa17.94■□□□□ 0.46
PHGDH-231ENST00000641939 KANSL2Q9H9L4 492 aa17.94■□□□□ 0.46
PHGDH-231ENST00000641939 ZNF287Q9HBT7 754 aa17.94■□□□□ 0.46
PHGDH-231ENST00000641939 A0A0D9SFI3 127 aa17.93■□□□□ 0.46
PHGDH-231ENST00000641939 PRKCZQ05513 592 aa17.93■□□□□ 0.46
PHGDH-231ENST00000641939 MCMDC2Q4G0Z9 681 aa17.93■□□□□ 0.46
PHGDH-231ENST00000641939 CATSPERGQ6ZRH7 1159 aa17.93■□□□□ 0.46
PHGDH-231ENST00000641939 ZNF333Q96JL9 665 aa17.93■□□□□ 0.46
PHGDH-231ENST00000641939 RPAP3Q9H6T3 665 aaPredicted RBP17.93■□□□□ 0.46
PHGDH-231ENST00000641939 TXNRD2Q9NNW7 524 aa17.93■□□□□ 0.46
PHGDH-231ENST00000641939 TMX2Q9Y320 296 aa17.93■□□□□ 0.46
PHGDH-231ENST00000641939 RLFQ13129 1914 aa17.92■□□□□ 0.46
PHGDH-231ENST00000641939 PDE4DIPQ5VU43 2346 aa17.92■□□□□ 0.46
PHGDH-231ENST00000641939 FOXP2O15409 715 aa17.92■□□□□ 0.46
PHGDH-231ENST00000641939 SLC3A2P08195 630 aaKnown RBP17.92■□□□□ 0.46
PHGDH-231ENST00000641939 NMIQ13287 307 aaPredicted RBP17.92■□□□□ 0.46
PHGDH-231ENST00000641939 GPRC5AQ8NFJ5 357 aa17.92■□□□□ 0.46
PHGDH-231ENST00000641939 SH3TC2Q8TF17 1288 aa17.92■□□□□ 0.46
PHGDH-231ENST00000641939 COA7Q96BR5 231 aa17.92■□□□□ 0.46
PHGDH-231ENST00000641939 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.92■□□□□ 0.46
PHGDH-231ENST00000641939 RBPJLQ9UBG7 517 aa17.92■□□□□ 0.46
PHGDH-231ENST00000641939 GABRQQ9UN88 632 aa17.92■□□□□ 0.46
PHGDH-231ENST00000641939 PARP14Q460N5 1801 aa17.91■□□□□ 0.46
PHGDH-231ENST00000641939 EEF2P13639 858 aaKnown RBP17.91■□□□□ 0.46
PHGDH-231ENST00000641939 SDSP20132 328 aa17.91■□□□□ 0.46
PHGDH-231ENST00000641939 ATP2B2Q01814 1243 aa17.91■□□□□ 0.46
PHGDH-231ENST00000641939 PDE4BQ07343 736 aa17.91■□□□□ 0.46
PHGDH-231ENST00000641939 PPARAQ07869 468 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 540.4 ms