RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 FMR1Q06787 632 aaKnown RBP eCLIP20.5■□□□□ 0.873e-7■■■□□ 15
PHGDH-230ENST00000641927 TMTC2Q8N394 836 aa20.5■□□□□ 0.87
PHGDH-230ENST00000641927 FBXL16Q8N461 479 aa20.5■□□□□ 0.87
PHGDH-230ENST00000641927 AGXT2Q9BYV1 514 aa20.5■□□□□ 0.87
PHGDH-230ENST00000641927 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.5■□□□□ 0.87
PHGDH-230ENST00000641927 KLF18A0A0U1RQI7 1052 aa20.49■□□□□ 0.87
PHGDH-230ENST00000641927 CTNND1O60716 968 aaKnown RBP20.49■□□□□ 0.87
PHGDH-230ENST00000641927 USP2O75604 605 aaPredicted RBP20.49■□□□□ 0.87
PHGDH-230ENST00000641927 DGKHQ86XP1 1220 aa20.49■□□□□ 0.87
PHGDH-230ENST00000641927 ZKSCAN4Q969J2 545 aaPredicted RBP20.49■□□□□ 0.87
PHGDH-230ENST00000641927 KLRG1Q96E93 195 aa20.49■□□□□ 0.87
PHGDH-230ENST00000641927 TBC1D2Q9BYX2 928 aa20.49■□□□□ 0.87
PHGDH-230ENST00000641927 KANSL2Q9H9L4 492 aa20.49■□□□□ 0.87
PHGDH-230ENST00000641927 MTMR4Q9NYA4 1195 aa20.49■□□□□ 0.87
PHGDH-230ENST00000641927 TPCN1Q9ULQ1 816 aa20.49■□□□□ 0.87
PHGDH-230ENST00000641927 SLC12A7Q9Y666 1083 aa20.49■□□□□ 0.87
PHGDH-230ENST00000641927 IGKV6D-41A0A0C4DH26 115 aa20.48■□□□□ 0.87
PHGDH-230ENST00000641927 ASNSP08243 561 aa20.48■□□□□ 0.87
PHGDH-230ENST00000641927 ICA1Q05084 483 aa20.48■□□□□ 0.87
PHGDH-230ENST00000641927 SYNE3Q6ZMZ3 975 aa20.48■□□□□ 0.87
PHGDH-230ENST00000641927 KAT14Q9H8E8 782 aa20.48■□□□□ 0.87
PHGDH-230ENST00000641927 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.48■□□□□ 0.87
PHGDH-230ENST00000641927 CLIP2Q9UDT6 1046 aa20.48■□□□□ 0.87
PHGDH-230ENST00000641927 ZNF112Q9UJU3 913 aa20.48■□□□□ 0.87
PHGDH-230ENST00000641927 BRPF3Q9ULD4 1205 aa20.48■□□□□ 0.87
PHGDH-230ENST00000641927 K7ELQ4 463 aaPredicted RBP20.48■□□□□ 0.87
PHGDH-230ENST00000641927 TTLL1O95922 423 aa20.48■□□□□ 0.87
PHGDH-230ENST00000641927 GUCY1A2P33402 732 aa20.48■□□□□ 0.87
PHGDH-230ENST00000641927 IREB2P48200 963 aaKnown RBP20.48■□□□□ 0.87
PHGDH-230ENST00000641927 STK3Q13188 491 aa20.48■□□□□ 0.87
PHGDH-230ENST00000641927 PPP4R3BQ5MIZ7 849 aa20.48■□□□□ 0.87
PHGDH-230ENST00000641927 RCSD1Q6JBY9 416 aa20.48■□□□□ 0.87
PHGDH-230ENST00000641927 SGMS1Q86VZ5 419 aa20.48■□□□□ 0.87
PHGDH-230ENST00000641927 RAB11FIP4Q86YS3 637 aa20.48■□□□□ 0.87
PHGDH-230ENST00000641927 GOLGA8BA8MQT2 603 aa20.47■□□□□ 0.87
PHGDH-230ENST00000641927 KIF3CO14782 793 aa20.47■□□□□ 0.87
PHGDH-230ENST00000641927 SCYL3Q8IZE3 742 aa20.47■□□□□ 0.87
PHGDH-230ENST00000641927 TMEM47Q9BQJ4 181 aa20.47■□□□□ 0.87
PHGDH-230ENST00000641927 PICK1Q9NRD5 415 aa20.47■□□□□ 0.87
PHGDH-230ENST00000641927 EEF2P13639 858 aaKnown RBP20.46■□□□□ 0.87
PHGDH-230ENST00000641927 MAP3K9P80192 1104 aa20.46■□□□□ 0.87
PHGDH-230ENST00000641927 MOB2Q70IA6 237 aa20.46■□□□□ 0.87
PHGDH-230ENST00000641927 ARMC9Q7Z3E5 817 aa20.46■□□□□ 0.87
PHGDH-230ENST00000641927 CATIPQ7Z7H3 387 aa20.46■□□□□ 0.87
PHGDH-230ENST00000641927 LRRC47Q8N1G4 583 aaKnown RBP20.46■□□□□ 0.87
PHGDH-230ENST00000641927 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.46■□□□□ 0.872e-7■■□□□ 13.6
PHGDH-230ENST00000641927 TMX3Q96JJ7 454 aa20.46■□□□□ 0.87
PHGDH-230ENST00000641927 MYL10Q9BUA6 226 aa20.46■□□□□ 0.87
PHGDH-230ENST00000641927 DAXXQ9UER7 740 aaPredicted RBP20.46■□□□□ 0.87
PHGDH-230ENST00000641927 MTMR7Q9Y216 660 aa20.46■□□□□ 0.87
PHGDH-230ENST00000641927 CSADQ9Y600 493 aa20.46■□□□□ 0.87
PHGDH-230ENST00000641927 GREB1LQ9C091 1923 aaPredicted RBP20.45■□□□□ 0.86
PHGDH-230ENST00000641927 CELF2O95319 508 aaKnown RBP20.45■□□□□ 0.86
PHGDH-230ENST00000641927 TOP1P11387 765 aaKnown RBP20.45■□□□□ 0.86
PHGDH-230ENST00000641927 ME3Q16798 604 aa20.45■□□□□ 0.86
PHGDH-230ENST00000641927 APOA5Q6Q788 366 aa20.45■□□□□ 0.86
PHGDH-230ENST00000641927 CCDC84Q86UT8 332 aaPredicted RBP20.45■□□□□ 0.86
PHGDH-230ENST00000641927 MICU3Q86XE3 530 aa20.45■□□□□ 0.86
PHGDH-230ENST00000641927 ZNF654Q8IZM8 581 aa20.45■□□□□ 0.86
PHGDH-230ENST00000641927 NUP133Q8WUM0 1156 aa20.45■□□□□ 0.86
PHGDH-230ENST00000641927 ANKS1AQ92625 1134 aa20.45■□□□□ 0.86
PHGDH-230ENST00000641927 ZSCAN31Q96LW9 406 aaPredicted RBP20.45■□□□□ 0.86
PHGDH-230ENST00000641927 ATAD5Q96QE3 1844 aa20.45■□□□□ 0.86
PHGDH-230ENST00000641927 ZBTB43O43298 467 aa20.45■□□□□ 0.86
PHGDH-230ENST00000641927 RAD21O60216 631 aa20.45■□□□□ 0.86
PHGDH-230ENST00000641927 LARGE1O95461 756 aa20.45■□□□□ 0.86
PHGDH-230ENST00000641927 ITGBL1O95965 494 aaPredicted RBP20.45■□□□□ 0.86
PHGDH-230ENST00000641927 RXRAP19793 462 aa20.45■□□□□ 0.86
PHGDH-230ENST00000641927 PDIA3P30101 505 aaKnown RBP20.45■□□□□ 0.86
PHGDH-230ENST00000641927 CCDC144CPQ8IYA2 1237 aa20.45■□□□□ 0.86
PHGDH-230ENST00000641927 PNMA1Q8ND90 353 aa20.45■□□□□ 0.86
PHGDH-230ENST00000641927 CHMP4CQ96CF2 233 aa20.45■□□□□ 0.86
PHGDH-230ENST00000641927 ZNF274Q96GC6 653 aaPredicted RBP20.45■□□□□ 0.86
PHGDH-230ENST00000641927 SLKQ9H2G2 1235 aaPredicted RBP20.45■□□□□ 0.86
PHGDH-230ENST00000641927 ARHGEF10LQ9HCE6 1279 aa20.45■□□□□ 0.86
PHGDH-230ENST00000641927 GINM1Q9NU53 330 aa20.45■□□□□ 0.86
PHGDH-230ENST00000641927 EVCP57679 992 aa20.44■□□□□ 0.86
PHGDH-230ENST00000641927 VGLL4Q14135 290 aa20.44■□□□□ 0.86
PHGDH-230ENST00000641927 NECAB1Q8N987 351 aa20.44■□□□□ 0.86
PHGDH-230ENST00000641927 SH2B1Q9NRF2 756 aaPredicted RBP20.44■□□□□ 0.86
PHGDH-230ENST00000641927 NYAP2Q9P242 653 aa20.44■□□□□ 0.86
PHGDH-230ENST00000641927 HSP90AA1P07900 732 aaKnown RBP20.43■□□□□ 0.86
PHGDH-230ENST00000641927 NOVP48745 357 aa20.43■□□□□ 0.86
PHGDH-230ENST00000641927 SLC4A3P48751 1232 aa20.43■□□□□ 0.86
PHGDH-230ENST00000641927 CCT2P78371 535 aaKnown RBP20.43■□□□□ 0.86
PHGDH-230ENST00000641927 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.43■□□□□ 0.86
PHGDH-230ENST00000641927 ANKRD13AQ8IZ07 590 aa20.43■□□□□ 0.86
PHGDH-230ENST00000641927 ZNF784Q8NCA9 323 aaPredicted RBP20.43■□□□□ 0.86
PHGDH-230ENST00000641927 SMC1BQ8NDV3 1235 aa20.43■□□□□ 0.86
PHGDH-230ENST00000641927 DOCK1Q14185 1865 aa20.43■□□□□ 0.86
PHGDH-230ENST00000641927 USP17L5A8MUK1 530 aa20.42■□□□□ 0.86
PHGDH-230ENST00000641927 UBE2Q2LH0YL09 131 aa20.42■□□□□ 0.86
PHGDH-230ENST00000641927 METAP2P50579 478 aaKnown RBP eCLIP20.42■□□□□ 0.861e-6■■□□□ 12.1
PHGDH-230ENST00000641927 SIAH1Q8IUQ4 282 aa20.42■□□□□ 0.86
PHGDH-230ENST00000641927 C2orf69Q8N8R5 385 aa20.42■□□□□ 0.86
PHGDH-230ENST00000641927 GBA2Q9HCG7 927 aaPredicted RBP20.42■□□□□ 0.86
PHGDH-230ENST00000641927 GOLGA8AA7E2F4 631 aa20.42■□□□□ 0.86
PHGDH-230ENST00000641927 DDAH1O94760 285 aa20.42■□□□□ 0.86
PHGDH-230ENST00000641927 ECE1P42892 770 aa20.42■□□□□ 0.86
PHGDH-230ENST00000641927 MAP3K11Q16584 847 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms