RNA–Protein interactions for RNA: ENST00000640414.1

MECP2-226, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-226ENST00000640414 NPLOC4Q8TAT6 608 aa14.18□□□□□ -0.14
MECP2-226ENST00000640414 PANK1Q8TE04 598 aa14.18□□□□□ -0.14
MECP2-226ENST00000640414 CLUAP1Q96AJ1 413 aa14.18□□□□□ -0.14
MECP2-226ENST00000640414 SYNGAP1Q96PV0 1343 aa14.17□□□□□ -0.14
MECP2-226ENST00000640414 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.17□□□□□ -0.14
MECP2-226ENST00000640414 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.17□□□□□ -0.14
MECP2-226ENST00000640414 USP17L10C9JJH3 530 aa14.17□□□□□ -0.14
MECP2-226ENST00000640414 GLRX3O76003 335 aaKnown RBP14.17□□□□□ -0.14
MECP2-226ENST00000640414 ASNSP08243 561 aa14.17□□□□□ -0.14
MECP2-226ENST00000640414 ADCYAP1R1P41586 468 aa14.17□□□□□ -0.14
MECP2-226ENST00000640414 MRPS5P82675 430 aaKnown RBP14.17□□□□□ -0.14
MECP2-226ENST00000640414 TLE2Q04725 743 aa14.17□□□□□ -0.14
MECP2-226ENST00000640414 WDR78Q5VTH9 848 aa14.17□□□□□ -0.14
MECP2-226ENST00000640414 C1orf53Q5VUE5 145 aa14.17□□□□□ -0.14
MECP2-226ENST00000640414 ANO1Q5XXA6 986 aa14.17□□□□□ -0.14
MECP2-226ENST00000640414 SPTY2D1Q68D10 685 aaPredicted RBP14.17□□□□□ -0.14
MECP2-226ENST00000640414 TIFAQ96CG3 184 aa14.17□□□□□ -0.14
MECP2-226ENST00000640414 API5Q9BZZ5 524 aaKnown RBP14.17□□□□□ -0.14
MECP2-226ENST00000640414 USP44Q9H0E7 712 aa14.17□□□□□ -0.14
MECP2-226ENST00000640414 SIL1Q9H173 461 aa14.17□□□□□ -0.14
MECP2-226ENST00000640414 EMILIN3Q9NT22 766 aa14.17□□□□□ -0.14
MECP2-226ENST00000640414 CEP126Q9P2H0 1117 aa14.17□□□□□ -0.14
MECP2-226ENST00000640414 RABGAP1Q9Y3P9 1069 aa14.17□□□□□ -0.14
MECP2-226ENST00000640414 PTPRCP08575 1304 aa14.16□□□□□ -0.14
MECP2-226ENST00000640414 PDS5AQ29RF7 1337 aaKnown RBP14.16□□□□□ -0.14
MECP2-226ENST00000640414 MYCNP04198 464 aaPredicted RBP14.16□□□□□ -0.14
MECP2-226ENST00000640414 NEFLP07196 543 aa14.16□□□□□ -0.14
MECP2-226ENST00000640414 CCNA1P78396 465 aa14.16□□□□□ -0.14
MECP2-226ENST00000640414 GRB14Q14449 540 aa14.16□□□□□ -0.14
MECP2-226ENST00000640414 AKNAD1Q5T1N1 836 aa14.16□□□□□ -0.14
MECP2-226ENST00000640414 FERMT2Q96AC1 680 aa14.16□□□□□ -0.14
MECP2-226ENST00000640414 GAS2L1Q99501 681 aaPredicted RBP14.16□□□□□ -0.14
MECP2-226ENST00000640414 C1QTNF1Q9BXJ1 281 aa14.16□□□□□ -0.14
MECP2-226ENST00000640414 MS4A1P11836 297 aa14.15□□□□□ -0.14
MECP2-226ENST00000640414 ERICH6Q7L0X2 663 aa14.15□□□□□ -0.14
MECP2-226ENST00000640414 NECAB3Q96P71 396 aaPredicted RBP14.15□□□□□ -0.14
MECP2-226ENST00000640414 PRDM12Q9H4Q4 367 aa14.15□□□□□ -0.14
MECP2-226ENST00000640414 DNAJC18Q9H819 358 aa14.15□□□□□ -0.14
MECP2-226ENST00000640414 PI4KBQ9UBF8 816 aa14.15□□□□□ -0.14
MECP2-226ENST00000640414 TACC3Q9Y6A5 838 aa14.15□□□□□ -0.14
MECP2-226ENST00000640414 KIAA0355O15063 1070 aa14.14□□□□□ -0.15
MECP2-226ENST00000640414 CIAO1O76071 339 aa14.14□□□□□ -0.15
MECP2-226ENST00000640414 GDF11O95390 407 aa14.14□□□□□ -0.15
MECP2-226ENST00000640414 MAP4K4O95819 1239 aaPredicted RBP14.14□□□□□ -0.15
MECP2-226ENST00000640414 CLTBP09497 229 aa14.14□□□□□ -0.15
MECP2-226ENST00000640414 RAG1P15918 1043 aa14.14□□□□□ -0.15
MECP2-226ENST00000640414 FPGSQ05932 587 aa14.14□□□□□ -0.15
MECP2-226ENST00000640414 CCDC85BQ15834 202 aaPredicted RBP14.14□□□□□ -0.15
MECP2-226ENST00000640414 CRBNQ96SW2 442 aa14.14□□□□□ -0.15
MECP2-226ENST00000640414 FBXO3Q9UK99 471 aa14.14□□□□□ -0.15
MECP2-226ENST00000640414 ZBTB21Q9ULJ3 1066 aa14.14□□□□□ -0.15
MECP2-226ENST00000640414 ARIH1Q9Y4X5 557 aaPredicted RBP14.14□□□□□ -0.15
MECP2-226ENST00000640414 IVNS1ABPQ9Y6Y0 642 aa14.14□□□□□ -0.15
MECP2-226ENST00000640414 SEPT4O43236 478 aa14.13□□□□□ -0.15
MECP2-226ENST00000640414 PBX2P40425 430 aa14.13□□□□□ -0.15
MECP2-226ENST00000640414 LRRC41Q15345 812 aa14.13□□□□□ -0.15
MECP2-226ENST00000640414 USP17L2Q6R6M4 530 aa14.13□□□□□ -0.15
MECP2-226ENST00000640414 FTSJ3Q8IY81 847 aaKnown RBP14.13□□□□□ -0.15
MECP2-226ENST00000640414 TEX11Q8IYF3 940 aa14.13□□□□□ -0.15
MECP2-226ENST00000640414 TMEM57Q8N5G2 664 aa14.13□□□□□ -0.15
MECP2-226ENST00000640414 IL27Q8NEV9 243 aa14.13□□□□□ -0.15
MECP2-226ENST00000640414 EXOC6Q8TAG9 804 aa14.13□□□□□ -0.15
MECP2-226ENST00000640414 NSUN4Q96CB9 384 aaKnown RBP14.13□□□□□ -0.15
MECP2-226ENST00000640414 BTBD7Q9P203 1132 aa14.13□□□□□ -0.15
MECP2-226ENST00000640414 COG6Q9Y2V7 657 aa14.13□□□□□ -0.15
MECP2-226ENST00000640414 GTF3C3Q9Y5Q9 886 aa14.13□□□□□ -0.15
MECP2-226ENST00000640414 USP17L15C9J2P7 530 aa14.12□□□□□ -0.15
MECP2-226ENST00000640414 USP17L13C9JLJ4 530 aa14.12□□□□□ -0.15
MECP2-226ENST00000640414 USP17L11C9JVI0 530 aa14.12□□□□□ -0.15
MECP2-226ENST00000640414 USP17L18D6R9N7 530 aa14.12□□□□□ -0.15
MECP2-226ENST00000640414 USP17L22D6RA61 530 aa14.12□□□□□ -0.15
MECP2-226ENST00000640414 USP17L17D6RBQ6 530 aa14.12□□□□□ -0.15
MECP2-226ENST00000640414 USP17L19D6RCP7 530 aa14.12□□□□□ -0.15
MECP2-226ENST00000640414 USP17L20D6RJB6 530 aa14.12□□□□□ -0.15
MECP2-226ENST00000640414 LDHCP07864 332 aa14.12□□□□□ -0.15
MECP2-226ENST00000640414 USP17L24Q0WX57 530 aa14.12□□□□□ -0.15
MECP2-226ENST00000640414 ADGRE1Q14246 886 aa14.12□□□□□ -0.15
MECP2-226ENST00000640414 OLFML2BQ68BL8 750 aa14.12□□□□□ -0.15
MECP2-226ENST00000640414 SH3RF3Q8TEJ3 882 aaPredicted RBP14.12□□□□□ -0.15
MECP2-226ENST00000640414 PBX4Q9BYU1 374 aa14.12□□□□□ -0.15
MECP2-226ENST00000640414 DHX36Q9H2U1 1008 aaKnown RBP14.12□□□□□ -0.15
MECP2-226ENST00000640414 GINM1Q9NU53 330 aa14.12□□□□□ -0.15
MECP2-226ENST00000640414 NCOR1O75376 2440 aa14.12□□□□□ -0.15
MECP2-226ENST00000640414 ZNF236Q9UL36 1845 aa14.11□□□□□ -0.15
MECP2-226ENST00000640414 BDP1A6H8Y1 2624 aa14.11□□□□□ -0.15
MECP2-226ENST00000640414 GRXCR1A8MXD5 290 aa14.11□□□□□ -0.15
MECP2-226ENST00000640414 IL15P40933 162 aaPredicted RBP14.11□□□□□ -0.15
MECP2-226ENST00000640414 TIMM10P62072 90 aa14.11□□□□□ -0.15
MECP2-226ENST00000640414 GSTO1P78417 241 aa14.11□□□□□ -0.15
MECP2-226ENST00000640414 FAM47AQ5JRC9 791 aa14.11□□□□□ -0.15
MECP2-226ENST00000640414 TBC1D9Q6ZT07 1266 aa14.11□□□□□ -0.15
MECP2-226ENST00000640414 DPP9Q86TI2 863 aa14.11□□□□□ -0.15
MECP2-226ENST00000640414 METTL16Q86W50 562 aaKnown RBP14.11□□□□□ -0.15
MECP2-226ENST00000640414 C12orf42Q96LP6 360 aa14.11□□□□□ -0.15
MECP2-226ENST00000640414 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.11□□□□□ -0.15
MECP2-226ENST00000640414 LRFN3Q9BTN0 628 aa14.11□□□□□ -0.15
MECP2-226ENST00000640414 PLXNA1Q9UIW2 1896 aa14.11□□□□□ -0.15
MECP2-226ENST00000640414 PHF24Q9UPV7 400 aa14.11□□□□□ -0.15
MECP2-226ENST00000640414 HCN4Q9Y3Q4 1203 aa14.11□□□□□ -0.15
MECP2-226ENST00000640414 PQBP1O60828 265 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms