RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 NR1I3Q14994 352 aa18.84■□□□□ 0.61
HNRNPU-228ENST00000640306 FCHSD1Q86WN1 690 aa18.84■□□□□ 0.61
HNRNPU-228ENST00000640306 KIFC2Q96AC6 838 aa18.84■□□□□ 0.61
HNRNPU-228ENST00000640306 SRRTQ9BXP5 876 aaKnown RBP18.84■□□□□ 0.61
HNRNPU-228ENST00000640306 MRFAP1Q9Y605 127 aa18.84■□□□□ 0.61
HNRNPU-228ENST00000640306 AKR1B15C9JRZ8 316 aaPredicted RBP18.84■□□□□ 0.61
HNRNPU-228ENST00000640306 SHANK3Q9BYB0 1731 aa18.83■□□□□ 0.61
HNRNPU-228ENST00000640306 COL14A1Q05707 1796 aaKnown RBP18.83■□□□□ 0.61
HNRNPU-228ENST00000640306 TOGARAM1Q9Y4F4 1720 aa18.83■□□□□ 0.61
HNRNPU-228ENST00000640306 CCDC196A0A1B0GTZ2 297 aa18.83■□□□□ 0.61
HNRNPU-228ENST00000640306 GYS2P54840 703 aa18.83■□□□□ 0.61
HNRNPU-228ENST00000640306 NT5DC1Q5TFE4 455 aa18.83■□□□□ 0.61
HNRNPU-228ENST00000640306 PARD6BQ9BYG5 372 aa18.83■□□□□ 0.61
HNRNPU-228ENST00000640306 MAPK8IP1Q9UQF2 711 aa18.83■□□□□ 0.61
HNRNPU-228ENST00000640306 EXOC5O00471 708 aa18.83■□□□□ 0.6
HNRNPU-228ENST00000640306 GYG1P46976 350 aa18.83■□□□□ 0.6
HNRNPU-228ENST00000640306 DYNLL1P63167 89 aaKnown RBP18.83■□□□□ 0.6
HNRNPU-228ENST00000640306 PPFIBP1Q86W92 1011 aa18.83■□□□□ 0.6
HNRNPU-228ENST00000640306 C8orf37Q96NL8 207 aa18.83■□□□□ 0.6
HNRNPU-228ENST00000640306 SYNRGQ9UMZ2 1314 aa18.82■□□□□ 0.6
HNRNPU-228ENST00000640306 CDC25AP30304 524 aa18.82■□□□□ 0.6
HNRNPU-228ENST00000640306 PAGE5Q96GU1 130 aa18.82■□□□□ 0.6
HNRNPU-228ENST00000640306 CEP131Q9UPN4 1083 aa18.82■□□□□ 0.6
HNRNPU-228ENST00000640306 COL22A1Q8NFW1 1626 aaPredicted RBP18.82■□□□□ 0.6
HNRNPU-228ENST00000640306 TBC1D8O95759 1140 aa18.82■□□□□ 0.6
HNRNPU-228ENST00000640306 ABL1P00519 1130 aa18.82■□□□□ 0.6
HNRNPU-228ENST00000640306 CC2D1AQ6P1N0 951 aaPredicted RBP18.82■□□□□ 0.6
HNRNPU-228ENST00000640306 PAPPAQ13219 1627 aa18.82■□□□□ 0.6
HNRNPU-228ENST00000640306 A0A1B0GTH6 734 aa18.81■□□□□ 0.6
HNRNPU-228ENST00000640306 CCDC175P0C221 793 aa18.81■□□□□ 0.6
HNRNPU-228ENST00000640306 CASP14P31944 242 aa18.81■□□□□ 0.6
HNRNPU-228ENST00000640306 DPYDQ12882 1025 aa18.81■□□□□ 0.6
HNRNPU-228ENST00000640306 PKN1Q16512 942 aa18.81■□□□□ 0.6
HNRNPU-228ENST00000640306 ENAHQ8N8S7 591 aaPredicted RBP18.81■□□□□ 0.6
HNRNPU-228ENST00000640306 NEK11Q8NG66 645 aa18.81■□□□□ 0.6
HNRNPU-228ENST00000640306 CTNND2Q9UQB3 1225 aa18.81■□□□□ 0.6
HNRNPU-228ENST00000640306 MYO1BO43795 1136 aa18.81■□□□□ 0.6
HNRNPU-228ENST00000640306 ZNF34Q8IZ26 560 aa18.81■□□□□ 0.6
HNRNPU-228ENST00000640306 NMT2O60551 498 aa18.8■□□□□ 0.6
HNRNPU-228ENST00000640306 APTXQ7Z2E3 356 aaKnown RBP18.8■□□□□ 0.6
HNRNPU-228ENST00000640306 ACRBPQ8NEB7 543 aa18.8■□□□□ 0.6
HNRNPU-228ENST00000640306 VEGFAP15692 232 aaPredicted RBP18.8■□□□□ 0.6
HNRNPU-228ENST00000640306 KRT2P35908 639 aa18.8■□□□□ 0.6
HNRNPU-228ENST00000640306 ST5P78524 1137 aa18.8■□□□□ 0.6
HNRNPU-228ENST00000640306 CHRNDQ07001 517 aa18.8■□□□□ 0.6
HNRNPU-228ENST00000640306 IFIT1BQ5T764 474 aaKnown RBP18.8■□□□□ 0.6
HNRNPU-228ENST00000640306 AEBP2Q6ZN18 517 aaPredicted RBP18.8■□□□□ 0.6
HNRNPU-228ENST00000640306 ZNF579Q8NAF0 562 aaKnown RBP18.8■□□□□ 0.6
HNRNPU-228ENST00000640306 RGS22Q8NE09 1264 aa18.8■□□□□ 0.6
HNRNPU-228ENST00000640306 ESR2Q92731 530 aa18.8■□□□□ 0.6
HNRNPU-228ENST00000640306 VPS16Q9H269 839 aa18.8■□□□□ 0.6
HNRNPU-228ENST00000640306 RNF41Q9H4P4 317 aaPredicted RBP18.8■□□□□ 0.6
HNRNPU-228ENST00000640306 DISP2A7MBM2 1401 aa18.8■□□□□ 0.6
HNRNPU-228ENST00000640306 OAS2P29728 719 aaKnown RBP18.8■□□□□ 0.6
HNRNPU-228ENST00000640306 IGHMBP2P38935 993 aaKnown RBP18.8■□□□□ 0.6
HNRNPU-228ENST00000640306 ZNF569Q5MCW4 686 aa18.8■□□□□ 0.6
HNRNPU-228ENST00000640306 KANK3Q6NY19 840 aa18.8■□□□□ 0.6
HNRNPU-228ENST00000640306 MAGEB6P1A0A0J9YX57 407 aa18.79■□□□□ 0.6
HNRNPU-228ENST00000640306 GOLGA6L9A6NEM1 432 aa18.79■□□□□ 0.6
HNRNPU-228ENST00000640306 ADAMTS3O15072 1205 aa18.79■□□□□ 0.6
HNRNPU-228ENST00000640306 GNAT2P19087 354 aa18.79■□□□□ 0.6
HNRNPU-228ENST00000640306 FXR1P51114 621 aaKnown RBP eCLIP18.79■□□□□ 0.65e-8■□□□□ 9.9
HNRNPU-228ENST00000640306 SEC23AQ15436 765 aa18.79■□□□□ 0.6
HNRNPU-228ENST00000640306 SPATA1Q5VX52 437 aa18.79■□□□□ 0.6
HNRNPU-228ENST00000640306 TRIML1Q8N9V2 468 aa18.79■□□□□ 0.6
HNRNPU-228ENST00000640306 ADGRG1Q9Y653 693 aa18.79■□□□□ 0.6
HNRNPU-228ENST00000640306 SPATA31A1Q5TZJ5 1347 aa18.79■□□□□ 0.6
HNRNPU-228ENST00000640306 TMTC2Q8N394 836 aa18.79■□□□□ 0.6
HNRNPU-228ENST00000640306 ACSBG1Q96GR2 724 aa18.79■□□□□ 0.6
HNRNPU-228ENST00000640306 CDC5LQ99459 802 aaKnown RBP18.79■□□□□ 0.6
HNRNPU-228ENST00000640306 XBP1P17861 261 aa18.78■□□□□ 0.6
HNRNPU-228ENST00000640306 ERCC5P28715 1186 aaPredicted RBP18.78■□□□□ 0.6
HNRNPU-228ENST00000640306 PTGDRQ13258 359 aa18.78■□□□□ 0.6
HNRNPU-228ENST00000640306 CUL4BQ13620 913 aa18.78■□□□□ 0.6
HNRNPU-228ENST00000640306 GPR161Q8N6U8 529 aaKnown RBP18.78■□□□□ 0.6
HNRNPU-228ENST00000640306 SPATA20Q8TB22 786 aa18.78■□□□□ 0.6
HNRNPU-228ENST00000640306 ARFGAP3Q9NP61 516 aa18.78■□□□□ 0.6
HNRNPU-228ENST00000640306 AATFQ9NY61 560 aaKnown RBP eCLIP18.78■□□□□ 0.62e-7■■□□□ 11.8
HNRNPU-228ENST00000640306 GOLGA1Q92805 767 aa18.78■□□□□ 0.6
HNRNPU-228ENST00000640306 ZSCAN10Q96SZ4 725 aaPredicted RBP18.78■□□□□ 0.6
HNRNPU-228ENST00000640306 RNF26Q9BY78 433 aaPredicted RBP18.78■□□□□ 0.6
HNRNPU-228ENST00000640306 ADD3Q9UEY8 706 aaKnown RBP18.78■□□□□ 0.6
HNRNPU-228ENST00000640306 PNPLA7Q6ZV29 1317 aa18.77■□□□□ 0.6
HNRNPU-228ENST00000640306 MCM7P33993 719 aa18.77■□□□□ 0.6
HNRNPU-228ENST00000640306 SMC1AQ14683 1233 aaKnown RBP18.77■□□□□ 0.6
HNRNPU-228ENST00000640306 KIF4BQ2VIQ3 1234 aa18.77■□□□□ 0.6
HNRNPU-228ENST00000640306 FAM47AQ5JRC9 791 aa18.77■□□□□ 0.6
HNRNPU-228ENST00000640306 PIK3AP1Q6ZUJ8 805 aa18.77■□□□□ 0.6
HNRNPU-228ENST00000640306 RSRC2Q7L4I2 434 aaKnown RBP18.77■□□□□ 0.6
HNRNPU-228ENST00000640306 CATIPQ7Z7H3 387 aa18.77■□□□□ 0.6
HNRNPU-228ENST00000640306 NGLY1Q96IV0 654 aa18.77■□□□□ 0.6
HNRNPU-228ENST00000640306 NIP7Q9Y221 180 aaKnown RBP eCLIP18.77■□□□□ 0.6
HNRNPU-228ENST00000640306 SLIT2O94813 1529 aa18.77■□□□□ 0.6
HNRNPU-228ENST00000640306 CCDC66A2RUB6 948 aa18.77■□□□□ 0.6
HNRNPU-228ENST00000640306 RNF225M0QZC1 329 aaPredicted RBP18.77■□□□□ 0.6
HNRNPU-228ENST00000640306 RRAGBQ5VZM2 374 aa18.77■□□□□ 0.6
HNRNPU-228ENST00000640306 PHF20Q9BVI0 1012 aa18.77■□□□□ 0.6
HNRNPU-228ENST00000640306 TAB2Q9NYJ8 693 aa18.77■□□□□ 0.6
HNRNPU-228ENST00000640306 MTMR7Q9Y216 660 aa18.77■□□□□ 0.6
HNRNPU-228ENST00000640306 JAG2Q9Y219 1238 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms