RNA–Protein interactions for RNA: ENST00000640264.1

HNRNPU-227, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 328 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-227ENST00000640264 APBA2Q99767 749 aa12.84□□□□□ -0.35
HNRNPU-227ENST00000640264 PAGR1Q9BTK6 254 aa12.84□□□□□ -0.35
HNRNPU-227ENST00000640264 UNC80Q8N2C7 3258 aa12.84□□□□□ -0.35
HNRNPU-227ENST00000640264 EIF5BO60841 1220 aaKnown RBP12.83□□□□□ -0.36
HNRNPU-227ENST00000640264 GLRX3O76003 335 aaKnown RBP12.83□□□□□ -0.36
HNRNPU-227ENST00000640264 SLC4A3P48751 1232 aa12.83□□□□□ -0.36
HNRNPU-227ENST00000640264 CCL14Q16627 93 aa12.83□□□□□ -0.36
HNRNPU-227ENST00000640264 Q3C1V9 767 aa12.83□□□□□ -0.36
HNRNPU-227ENST00000640264 BMP2KLQ5H9B9 411 aa12.83□□□□□ -0.36
HNRNPU-227ENST00000640264 MORN1Q5T089 497 aa12.83□□□□□ -0.36
HNRNPU-227ENST00000640264 FAM109BQ6ICB4 259 aaPredicted RBP12.83□□□□□ -0.36
HNRNPU-227ENST00000640264 NAA16Q6N069 864 aaPredicted RBP12.83□□□□□ -0.36
HNRNPU-227ENST00000640264 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.83□□□□□ -0.36
HNRNPU-227ENST00000640264 TGFBRAP1Q8WUH2 860 aa12.83□□□□□ -0.36
HNRNPU-227ENST00000640264 PORCNQ9H237 461 aa12.83□□□□□ -0.36
HNRNPU-227ENST00000640264 AATFQ9NY61 560 aaKnown RBP eCLIP12.83□□□□□ -0.36
HNRNPU-227ENST00000640264 DNAH12Q6ZR08 3092 aa12.82□□□□□ -0.36
HNRNPU-227ENST00000640264 POTEB2H3BUK9 544 aa12.82□□□□□ -0.36
HNRNPU-227ENST00000640264 GDF11O95390 407 aa12.82□□□□□ -0.36
HNRNPU-227ENST00000640264 MCAMP43121 646 aa12.82□□□□□ -0.36
HNRNPU-227ENST00000640264 PPP4CP60510 307 aa12.82□□□□□ -0.36
HNRNPU-227ENST00000640264 CCNA1P78396 465 aa12.82□□□□□ -0.36
HNRNPU-227ENST00000640264 JAG1P78504 1218 aa12.82□□□□□ -0.36
HNRNPU-227ENST00000640264 G3BP1Q13283 466 aaKnown RBP eCLIP12.82□□□□□ -0.361e-7■■□□□ 14.5
HNRNPU-227ENST00000640264 MFSD14CQ5VZR4 134 aa12.82□□□□□ -0.36
HNRNPU-227ENST00000640264 USP17L2Q6R6M4 530 aa12.82□□□□□ -0.36
HNRNPU-227ENST00000640264 METTL16Q86W50 562 aaKnown RBP12.82□□□□□ -0.36
HNRNPU-227ENST00000640264 MAPKAPK5Q8IW41 473 aa12.82□□□□□ -0.36
HNRNPU-227ENST00000640264 EDC3Q96F86 508 aaKnown RBP12.82□□□□□ -0.36
HNRNPU-227ENST00000640264 COL25A1Q9BXS0 654 aaPredicted RBP12.82□□□□□ -0.36
HNRNPU-227ENST00000640264 SENP6Q9GZR1 1112 aaPredicted RBP12.82□□□□□ -0.36
HNRNPU-227ENST00000640264 BCL11AQ9H165 835 aa12.82□□□□□ -0.36
HNRNPU-227ENST00000640264 ZBTB21Q9ULJ3 1066 aa12.82□□□□□ -0.36
HNRNPU-227ENST00000640264 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.82□□□□□ -0.36
HNRNPU-227ENST00000640264 SIPA1L1O43166 1804 aa12.82□□□□□ -0.36
HNRNPU-227ENST00000640264 HLA-DOAP06340 250 aa12.81□□□□□ -0.36
HNRNPU-227ENST00000640264 RBM25P49756 843 aaKnown RBP12.81□□□□□ -0.36
HNRNPU-227ENST00000640264 MAP2K5Q13163 448 aa12.81□□□□□ -0.36
HNRNPU-227ENST00000640264 C22orf23Q9BZE7 217 aa12.81□□□□□ -0.36
HNRNPU-227ENST00000640264 ANTXR1Q9H6X2 564 aa12.81□□□□□ -0.36
HNRNPU-227ENST00000640264 DNAJC18Q9H819 358 aa12.81□□□□□ -0.36
HNRNPU-227ENST00000640264 EMILIN3Q9NT22 766 aa12.81□□□□□ -0.36
HNRNPU-227ENST00000640264 PRKAG2Q9UGJ0 569 aa12.81□□□□□ -0.36
HNRNPU-227ENST00000640264 PALD1Q9ULE6 856 aa12.81□□□□□ -0.36
HNRNPU-227ENST00000640264 RABGAP1Q9Y3P9 1069 aa12.81□□□□□ -0.36
HNRNPU-227ENST00000640264 FLT1P17948 1338 aa12.81□□□□□ -0.36
HNRNPU-227ENST00000640264 FRMPD3Q5JV73 1810 aa12.81□□□□□ -0.36
HNRNPU-227ENST00000640264 FOCADQ5VW36 1801 aa12.81□□□□□ -0.36
HNRNPU-227ENST00000640264 CDK5RAP2Q96SN8 1893 aa12.8□□□□□ -0.36
HNRNPU-227ENST00000640264 LAMA2P24043 3122 aaKnown RBP12.8□□□□□ -0.36
HNRNPU-227ENST00000640264 MAST2Q6P0Q8 1798 aa12.8□□□□□ -0.36
HNRNPU-227ENST00000640264 USP17L15C9J2P7 530 aa12.8□□□□□ -0.36
HNRNPU-227ENST00000640264 USP17L13C9JLJ4 530 aa12.8□□□□□ -0.36
HNRNPU-227ENST00000640264 USP17L11C9JVI0 530 aa12.8□□□□□ -0.36
HNRNPU-227ENST00000640264 USP17L18D6R9N7 530 aa12.8□□□□□ -0.36
HNRNPU-227ENST00000640264 USP17L22D6RA61 530 aa12.8□□□□□ -0.36
HNRNPU-227ENST00000640264 USP17L17D6RBQ6 530 aa12.8□□□□□ -0.36
HNRNPU-227ENST00000640264 USP17L19D6RCP7 530 aa12.8□□□□□ -0.36
HNRNPU-227ENST00000640264 USP17L20D6RJB6 530 aa12.8□□□□□ -0.36
HNRNPU-227ENST00000640264 MSCO60682 206 aa12.8□□□□□ -0.36
HNRNPU-227ENST00000640264 USP17L24Q0WX57 530 aa12.8□□□□□ -0.36
HNRNPU-227ENST00000640264 TTC39AQ5SRH9 613 aa12.8□□□□□ -0.36
HNRNPU-227ENST00000640264 WDR78Q5VTH9 848 aa12.8□□□□□ -0.36
HNRNPU-227ENST00000640264 GUCD1Q96NT3 240 aa12.8□□□□□ -0.36
HNRNPU-227ENST00000640264 FEZ1Q99689 392 aa12.8□□□□□ -0.36
HNRNPU-227ENST00000640264 SNRKQ9NRH2 765 aa12.8□□□□□ -0.36
HNRNPU-227ENST00000640264 DDX20Q9UHI6 824 aaKnown RBP12.8□□□□□ -0.36
HNRNPU-227ENST00000640264 SAP30BPQ9UHR5 308 aaKnown RBP12.8□□□□□ -0.36
HNRNPU-227ENST00000640264 PNMA6EA0A0J9YXQ4 647 aa12.79□□□□□ -0.36
HNRNPU-227ENST00000640264 SLC15A5A6NIM6 579 aa12.79□□□□□ -0.36
HNRNPU-227ENST00000640264 IGSF3O75054 1194 aa12.79□□□□□ -0.36
HNRNPU-227ENST00000640264 GH2P01242 217 aa12.79□□□□□ -0.36
HNRNPU-227ENST00000640264 CNGA1P29973 690 aa12.79□□□□□ -0.36
HNRNPU-227ENST00000640264 ATP2B2Q01814 1243 aa12.79□□□□□ -0.36
HNRNPU-227ENST00000640264 SHROOM1Q2M3G4 852 aaPredicted RBP12.79□□□□□ -0.36
HNRNPU-227ENST00000640264 CCDC158Q5M9N0 1113 aa12.79□□□□□ -0.36
HNRNPU-227ENST00000640264 ZNF697Q5TEC3 545 aa12.79□□□□□ -0.36
HNRNPU-227ENST00000640264 POTEEQ6S8J3 1075 aa12.79□□□□□ -0.36
HNRNPU-227ENST00000640264 SIRT2Q8IXJ6 389 aa12.79□□□□□ -0.36
HNRNPU-227ENST00000640264 LPAR1Q92633 364 aa12.79□□□□□ -0.36
HNRNPU-227ENST00000640264 FAM161BQ96MY7 647 aa12.79□□□□□ -0.36
HNRNPU-227ENST00000640264 IVNS1ABPQ9Y6Y0 642 aa12.79□□□□□ -0.36
HNRNPU-227ENST00000640264 DNM1LO00429 736 aa12.78□□□□□ -0.36
HNRNPU-227ENST00000640264 PTPREP23469 700 aa12.78□□□□□ -0.36
HNRNPU-227ENST00000640264 ATN1P54259 1190 aaPredicted RBP12.78□□□□□ -0.36
HNRNPU-227ENST00000640264 USP14P54578 494 aa12.78□□□□□ -0.36
HNRNPU-227ENST00000640264 OS9Q13438 667 aaPredicted RBP12.78□□□□□ -0.36
HNRNPU-227ENST00000640264 ZYXQ15942 572 aaKnown RBP12.78□□□□□ -0.36
HNRNPU-227ENST00000640264 ADGRA1Q86SQ6 560 aa12.78□□□□□ -0.36
HNRNPU-227ENST00000640264 RPAP2Q8IXW5 612 aaPredicted RBP12.78□□□□□ -0.36
HNRNPU-227ENST00000640264 SNX21Q969T3 373 aa12.78□□□□□ -0.36
HNRNPU-227ENST00000640264 C12orf42Q96LP6 360 aa12.78□□□□□ -0.36
HNRNPU-227ENST00000640264 FLRT1Q9NZU1 646 aa12.78□□□□□ -0.36
HNRNPU-227ENST00000640264 NDUFB9Q9Y6M9 179 aa12.78□□□□□ -0.36
HNRNPU-227ENST00000640264 CNMDO75829 334 aa12.77□□□□□ -0.37
HNRNPU-227ENST00000640264 HOXC6P09630 235 aa12.77□□□□□ -0.37
HNRNPU-227ENST00000640264 GSE1Q14687 1217 aa12.77□□□□□ -0.37
HNRNPU-227ENST00000640264 CATSPERGQ6ZRH7 1159 aa12.77□□□□□ -0.37
HNRNPU-227ENST00000640264 ARRDC4Q8NCT1 418 aa12.77□□□□□ -0.37
HNRNPU-227ENST00000640264 DCTPP1Q9H773 170 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms