RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 PPP2R5BQ15173 497 aa16.36■□□□□ 0.21
HNRNPU-226ENST00000640218 TCOF1Q13428 1488 aaKnown RBP16.36■□□□□ 0.21
HNRNPU-226ENST00000640218 CFAP65Q6ZU64 1925 aaKnown RBP16.36■□□□□ 0.21
HNRNPU-226ENST00000640218 ATXN8OSP0DMR3 200 aa16.36■□□□□ 0.21
HNRNPU-226ENST00000640218 EIF4A1P60842 406 aaKnown RBP16.36■□□□□ 0.21
HNRNPU-226ENST00000640218 ARHGEF12Q9NZN5 1544 aa16.36■□□□□ 0.21
HNRNPU-226ENST00000640218 PSMB7Q99436 277 aa16.36■□□□□ 0.21
HNRNPU-226ENST00000640218 ZMYM4Q5VZL5 1548 aa16.35■□□□□ 0.21
HNRNPU-226ENST00000640218 EDC3Q96F86 508 aaKnown RBP16.35■□□□□ 0.21
HNRNPU-226ENST00000640218 CARD6Q9BX69 1037 aa16.35■□□□□ 0.21
HNRNPU-226ENST00000640218 NEURL1BA8MQ27 555 aa16.35■□□□□ 0.21
HNRNPU-226ENST00000640218 SUPT20HQ8NEM7 779 aa16.35■□□□□ 0.21
HNRNPU-226ENST00000640218 CCDC94Q9BW85 323 aaPredicted RBP16.35■□□□□ 0.21
HNRNPU-226ENST00000640218 STIM2Q9P246 746 aa16.35■□□□□ 0.21
HNRNPU-226ENST00000640218 GTF2A1P52655 376 aaPredicted RBP16.35■□□□□ 0.21
HNRNPU-226ENST00000640218 PPP2R5DQ14738 602 aa16.35■□□□□ 0.21
HNRNPU-226ENST00000640218 DCUN1D2Q6PH85 259 aa16.35■□□□□ 0.21
HNRNPU-226ENST00000640218 PPARAQ07869 468 aa16.35■□□□□ 0.21
HNRNPU-226ENST00000640218 CEP128Q6ZU80 1094 aa16.35■□□□□ 0.21
HNRNPU-226ENST00000640218 TRMT44Q8IYL2 757 aaKnown RBP16.35■□□□□ 0.21
HNRNPU-226ENST00000640218 FAM170AA1A519 330 aa16.34■□□□□ 0.21
HNRNPU-226ENST00000640218 CEP104O60308 925 aa16.34■□□□□ 0.21
HNRNPU-226ENST00000640218 TPH2Q8IWU9 490 aa16.34■□□□□ 0.21
HNRNPU-226ENST00000640218 USP40Q9NVE5 1235 aa16.34■□□□□ 0.21
HNRNPU-226ENST00000640218 CTSWP56202 376 aa16.34■□□□□ 0.21
HNRNPU-226ENST00000640218 REXO1Q8N1G1 1221 aaKnown RBP16.34■□□□□ 0.21
HNRNPU-226ENST00000640218 HOOK2Q96ED9 719 aa16.34■□□□□ 0.21
HNRNPU-226ENST00000640218 STK10O94804 968 aaKnown RBP16.34■□□□□ 0.21
HNRNPU-226ENST00000640218 MAGEA1P43355 309 aa16.34■□□□□ 0.21
HNRNPU-226ENST00000640218 ITIH3Q06033 890 aa16.34■□□□□ 0.21
HNRNPU-226ENST00000640218 MTX1Q13505 466 aa16.34■□□□□ 0.21
HNRNPU-226ENST00000640218 SMCR8Q8TEV9 937 aaPredicted RBP16.34■□□□□ 0.21
HNRNPU-226ENST00000640218 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.34■□□□□ 0.211e-6■□□□□ 10.5
HNRNPU-226ENST00000640218 HSPA1LP34931 641 aa16.34■□□□□ 0.21
HNRNPU-226ENST00000640218 GTF2IP78347 998 aa16.34■□□□□ 0.21
HNRNPU-226ENST00000640218 KLHL30Q0D2K2 578 aa16.34■□□□□ 0.21
HNRNPU-226ENST00000640218 DLGAP5Q15398 846 aa16.34■□□□□ 0.21
HNRNPU-226ENST00000640218 FAM47CQ5HY64 1035 aa16.34■□□□□ 0.21
HNRNPU-226ENST00000640218 IFT20Q8IY31 132 aa16.34■□□□□ 0.21
HNRNPU-226ENST00000640218 CMTR1Q8N1G2 835 aaKnown RBP16.34■□□□□ 0.21
HNRNPU-226ENST00000640218 AFAP1L1Q8TED9 768 aa16.34■□□□□ 0.21
HNRNPU-226ENST00000640218 DSCC1Q9BVC3 393 aa16.34■□□□□ 0.21
HNRNPU-226ENST00000640218 ASIC3Q9UHC3 531 aa16.34■□□□□ 0.21
HNRNPU-226ENST00000640218 GMNNO75496 209 aa16.34■□□□□ 0.21
HNRNPU-226ENST00000640218 PNOCQ13519 176 aa16.34■□□□□ 0.21
HNRNPU-226ENST00000640218 KLHL7Q8IXQ5 586 aa16.34■□□□□ 0.21
HNRNPU-226ENST00000640218 KDM2BQ8NHM5 1336 aa16.34■□□□□ 0.21
HNRNPU-226ENST00000640218 BCRP11274 1271 aa16.33■□□□□ 0.21
HNRNPU-226ENST00000640218 DNM2P50570 870 aa16.33■□□□□ 0.21
HNRNPU-226ENST00000640218 TMTC1Q8IUR5 882 aa16.33■□□□□ 0.21
HNRNPU-226ENST00000640218 RDH13Q8NBN7 331 aa16.33■□□□□ 0.21
HNRNPU-226ENST00000640218 CFAP57Q96MR6 1250 aa16.33■□□□□ 0.21
HNRNPU-226ENST00000640218 OGFRQ9NZT2 677 aa16.33■□□□□ 0.21
HNRNPU-226ENST00000640218 MYO1AQ9UBC5 1043 aa16.33■□□□□ 0.21
HNRNPU-226ENST00000640218 SMCO2A6NFE2 343 aa16.33■□□□□ 0.21
HNRNPU-226ENST00000640218 ATP5JP18859 108 aa16.33■□□□□ 0.21
HNRNPU-226ENST00000640218 NIM1KQ8IY84 436 aa16.33■□□□□ 0.21
HNRNPU-226ENST00000640218 IMPACTQ9P2X3 320 aa16.33■□□□□ 0.21
HNRNPU-226ENST00000640218 CD19P15391 556 aa16.33■□□□□ 0.2
HNRNPU-226ENST00000640218 MAST1Q9Y2H9 1570 aa16.33■□□□□ 0.2
HNRNPU-226ENST00000640218 TUBB2AQ13885 445 aa16.33■□□□□ 0.2
HNRNPU-226ENST00000640218 TUBB2BQ9BVA1 445 aa16.33■□□□□ 0.2
HNRNPU-226ENST00000640218 ALDH1B1P30837 517 aa16.33■□□□□ 0.2
HNRNPU-226ENST00000640218 PPARDQ03181 441 aa16.33■□□□□ 0.2
HNRNPU-226ENST00000640218 ARHGAP44Q17R89 818 aa16.33■□□□□ 0.2
HNRNPU-226ENST00000640218 VPS52Q8N1B4 723 aa16.33■□□□□ 0.2
HNRNPU-226ENST00000640218 TBC1D22AQ8WUA7 517 aa16.33■□□□□ 0.2
HNRNPU-226ENST00000640218 SFMBT2Q5VUG0 894 aa16.32■□□□□ 0.2
HNRNPU-226ENST00000640218 C17orf53Q8N3J3 647 aaPredicted RBP16.32■□□□□ 0.2
HNRNPU-226ENST00000640218 SLF1Q9BQI6 1058 aa16.32■□□□□ 0.2
HNRNPU-226ENST00000640218 WDR62O43379 1518 aa16.32■□□□□ 0.2
HNRNPU-226ENST00000640218 TRIM37O94972 964 aa16.32■□□□□ 0.2
HNRNPU-226ENST00000640218 ARPP21Q9UBL0 812 aaPredicted RBP16.32■□□□□ 0.2
HNRNPU-226ENST00000640218 SERTAD1Q9UHV2 236 aa16.32■□□□□ 0.2
HNRNPU-226ENST00000640218 PPIP5K2O43314 1243 aa16.32■□□□□ 0.2
HNRNPU-226ENST00000640218 PFDN4Q9NQP4 134 aa16.32■□□□□ 0.2
HNRNPU-226ENST00000640218 ZNF654Q8IZM8 581 aa16.32■□□□□ 0.2
HNRNPU-226ENST00000640218 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.32■□□□□ 0.2
HNRNPU-226ENST00000640218 USP17L12C9JPN9 530 aa16.32■□□□□ 0.2
HNRNPU-226ENST00000640218 USP17L21D6R901 530 aa16.32■□□□□ 0.2
HNRNPU-226ENST00000640218 PRPF6O94906 941 aaKnown RBP16.32■□□□□ 0.2
HNRNPU-226ENST00000640218 ME3Q16798 604 aa16.32■□□□□ 0.2
HNRNPU-226ENST00000640218 FYB2Q5VWT5 728 aa16.32■□□□□ 0.2
HNRNPU-226ENST00000640218 NACA2Q9H009 215 aa16.32■□□□□ 0.2
HNRNPU-226ENST00000640218 SHANK2Q9UPX8 1470 aa16.31■□□□□ 0.2
HNRNPU-226ENST00000640218 RPS8P62241 208 aaKnown RBP16.31■□□□□ 0.2
HNRNPU-226ENST00000640218 LRMPQ12912 555 aa16.31■□□□□ 0.2
HNRNPU-226ENST00000640218 TTC31Q49AM3 519 aaPredicted RBP16.31■□□□□ 0.2
HNRNPU-226ENST00000640218 FRMPD2Q68DX3 1309 aaPredicted RBP16.31■□□□□ 0.2
HNRNPU-226ENST00000640218 H7C1D1 291 aa16.31■□□□□ 0.2
HNRNPU-226ENST00000640218 RIOK3O14730 519 aaKnown RBP16.31■□□□□ 0.2
HNRNPU-226ENST00000640218 LACTBP83111 547 aaPredicted RBP16.31■□□□□ 0.2
HNRNPU-226ENST00000640218 MFSD14BQ5SR56 506 aa16.31■□□□□ 0.2
HNRNPU-226ENST00000640218 ARHGEF10O15013 1369 aa16.31■□□□□ 0.2
HNRNPU-226ENST00000640218 CIB2O75838 187 aa16.31■□□□□ 0.2
HNRNPU-226ENST00000640218 STMN2Q93045 179 aa16.31■□□□□ 0.2
HNRNPU-226ENST00000640218 FAM207AQ9NSI2 230 aaPredicted RBP16.31■□□□□ 0.2
HNRNPU-226ENST00000640218 FLOT1O75955 427 aa16.31■□□□□ 0.2
HNRNPU-226ENST00000640218 TNNI1P19237 187 aa16.31■□□□□ 0.2
HNRNPU-226ENST00000640218 IRX3P78415 501 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms