RNA–Protein interactions for RNA: ENST00000640039.1

SPIN3-233, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,067 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-233	ENST00000640039	RUFY2	Q8WXA3	655 aa		18.86	■□□□□ 0.61
SPIN3-233	ENST00000640039	PARK7	Q99497	189 aa	Known RBP	18.86	■□□□□ 0.61
SPIN3-233	ENST00000640039	R3HDML	Q9H3Y0	253 aa		18.86	■□□□□ 0.61
SPIN3-233	ENST00000640039	AGTPBP1	Q9UPW5	1226 aa		18.86	■□□□□ 0.61
SPIN3-233	ENST00000640039	FKTN	O75072	461 aa		18.85	■□□□□ 0.61
SPIN3-233	ENST00000640039	AKR1B1	P15121	316 aa		18.85	■□□□□ 0.61
SPIN3-233	ENST00000640039	PABPC4	Q13310	644 aa	Known RBP eCLIP	18.85	■□□□□ 0.61
SPIN3-233	ENST00000640039	ALX1	Q15699	326 aa		18.85	■□□□□ 0.61
SPIN3-233	ENST00000640039	SH3D19	Q5HYK7	790 aa		18.85	■□□□□ 0.61
SPIN3-233	ENST00000640039	GPAT2	Q6NUI2	795 aa		18.85	■□□□□ 0.61
SPIN3-233	ENST00000640039	ZNF296	Q8WUU4	475 aa	Predicted RBP	18.85	■□□□□ 0.61
SPIN3-233	ENST00000640039	PNMA3	Q9UL41	463 aa		18.85	■□□□□ 0.61
SPIN3-233	ENST00000640039	SLC45A1	Q9Y2W3	748 aa		18.85	■□□□□ 0.61
SPIN3-233	ENST00000640039	LOC285556	D6RIA3	1793 aa		18.84	■□□□□ 0.61
SPIN3-233	ENST00000640039	FOXP2	O15409	715 aa		18.84	■□□□□ 0.61
SPIN3-233	ENST00000640039	USP14	P54578	494 aa		18.84	■□□□□ 0.61
SPIN3-233	ENST00000640039	USP17L2	Q6R6M4	530 aa		18.84	■□□□□ 0.61
SPIN3-233	ENST00000640039	ZNF444	Q8N0Y2	327 aa	Predicted RBP	18.84	■□□□□ 0.61
SPIN3-233	ENST00000640039	ARHGEF10L	Q9HCE6	1279 aa		18.84	■□□□□ 0.61
SPIN3-233	ENST00000640039	ZMYM6	O95789	1325 aa		18.83	■□□□□ 0.61
SPIN3-233	ENST00000640039	RAD50	Q92878	1312 aa		18.83	■□□□□ 0.61
SPIN3-233	ENST00000640039	TLR2	O60603	784 aa		18.83	■□□□□ 0.6
SPIN3-233	ENST00000640039	FGA	P02671	866 aa		18.83	■□□□□ 0.6
SPIN3-233	ENST00000640039	GUCY1A2	P33402	732 aa		18.83	■□□□□ 0.6
SPIN3-233	ENST00000640039	ICA1	Q05084	483 aa		18.83	■□□□□ 0.6
SPIN3-233	ENST00000640039	ZYX	Q15942	572 aa	Known RBP	18.83	■□□□□ 0.6
SPIN3-233	ENST00000640039	PRDM1	O75626	825 aa		18.82	■□□□□ 0.6
SPIN3-233	ENST00000640039	RASA1	P20936	1047 aa		18.82	■□□□□ 0.6
SPIN3-233	ENST00000640039	CHML	P26374	656 aa		18.82	■□□□□ 0.6
SPIN3-233	ENST00000640039	TREML2	Q5T2D2	321 aa		18.82	■□□□□ 0.6
SPIN3-233	ENST00000640039	SKAP1	Q86WV1	359 aa		18.82	■□□□□ 0.6
SPIN3-233	ENST00000640039	SMCR8	Q8TEV9	937 aa	Predicted RBP	18.82	■□□□□ 0.6
SPIN3-233	ENST00000640039	KIAA1683	Q9H0B3	1180 aa		18.82	■□□□□ 0.6
SPIN3-233	ENST00000640039	SH2D4A	Q9H788	454 aa		18.82	■□□□□ 0.6
SPIN3-233	ENST00000640039	KANSL2	Q9H9L4	492 aa		18.82	■□□□□ 0.6
SPIN3-233	ENST00000640039	CYP2C8	P10632	490 aa		18.81	■□□□□ 0.6
SPIN3-233	ENST00000640039	OSBP	P22059	807 aa		18.81	■□□□□ 0.6
SPIN3-233	ENST00000640039	IRX3	P78415	501 aa	Predicted RBP	18.81	■□□□□ 0.6
SPIN3-233	ENST00000640039	ATP2B2	Q01814	1243 aa		18.81	■□□□□ 0.6
SPIN3-233	ENST00000640039	SP3	Q02447	781 aa		18.81	■□□□□ 0.6
SPIN3-233	ENST00000640039	CTDSPL2	Q05D32	466 aa		18.81	■□□□□ 0.6
SPIN3-233	ENST00000640039	BMP2KL	Q5H9B9	411 aa		18.81	■□□□□ 0.6
SPIN3-233	ENST00000640039	ACER1	Q8TDN7	264 aa		18.81	■□□□□ 0.6
SPIN3-233	ENST00000640039	ERO1A	Q96HE7	468 aa		18.81	■□□□□ 0.6
SPIN3-233	ENST00000640039	DSCC1	Q9BVC3	393 aa		18.81	■□□□□ 0.6
SPIN3-233	ENST00000640039	ANAPC4	Q9UJX5	808 aa		18.81	■□□□□ 0.6
SPIN3-233	ENST00000640039	PDE4DIP	Q5VU43	2346 aa		18.8	■□□□□ 0.6
SPIN3-233	ENST00000640039	TSPY3	P0CV98	308 aa		18.8	■□□□□ 0.6
SPIN3-233	ENST00000640039	TSPY8	P0CW00	308 aa		18.8	■□□□□ 0.6
SPIN3-233	ENST00000640039	C12orf42	Q96LP6	360 aa		18.8	■□□□□ 0.6
SPIN3-233	ENST00000640039	EMILIN3	Q9NT22	766 aa		18.8	■□□□□ 0.6
SPIN3-233	ENST00000640039	HPS5	Q9UPZ3	1129 aa		18.8	■□□□□ 0.6
SPIN3-233	ENST00000640039	SOX10	P56693	466 aa		18.79	■□□□□ 0.6
SPIN3-233	ENST00000640039	KIF22	Q14807	665 aa		18.79	■□□□□ 0.6
SPIN3-233	ENST00000640039	CLEC10A	Q8IUN9	316 aa		18.79	■□□□□ 0.6
SPIN3-233	ENST00000640039	TOMM22	Q9NS69	142 aa		18.79	■□□□□ 0.6
SPIN3-233	ENST00000640039	CPA4	Q9UI42	421 aa		18.79	■□□□□ 0.6
SPIN3-233	ENST00000640039	CTNNA3	Q9UI47	895 aa		18.79	■□□□□ 0.6
SPIN3-233	ENST00000640039	TNRC18	O15417	2968 aa	Predicted RBP	18.79	■□□□□ 0.6
SPIN3-233	ENST00000640039	ZNF213	O14771	459 aa		18.78	■□□□□ 0.6
SPIN3-233	ENST00000640039	HOXA7	P31268	230 aa	Predicted RBP	18.78	■□□□□ 0.6
SPIN3-233	ENST00000640039	HAND2	P61296	217 aa		18.78	■□□□□ 0.6
SPIN3-233	ENST00000640039	ARHGEF6	Q15052	776 aa		18.78	■□□□□ 0.6
SPIN3-233	ENST00000640039	PKN2	Q16513	984 aa	Known RBP	18.78	■□□□□ 0.6
SPIN3-233	ENST00000640039	ASCC2	Q9H1I8	757 aa	Predicted RBP	18.78	■□□□□ 0.6
SPIN3-233	ENST00000640039	ADGRA2	Q96PE1	1338 aa		18.77	■□□□□ 0.6
SPIN3-233	ENST00000640039	GREB1L	Q9C091	1923 aa	Predicted RBP	18.77	■□□□□ 0.6
SPIN3-233	ENST00000640039		A0A1W2PRG0	241 aa		18.77	■□□□□ 0.6
SPIN3-233	ENST00000640039	TSPY2	A6NKD2	308 aa		18.77	■□□□□ 0.6
SPIN3-233	ENST00000640039	EEF2	P13639	858 aa	Known RBP	18.77	■□□□□ 0.6
SPIN3-233	ENST00000640039	VCAM1	P19320	739 aa		18.77	■□□□□ 0.6
SPIN3-233	ENST00000640039	TFAP4	Q01664	338 aa		18.77	■□□□□ 0.6
SPIN3-233	ENST00000640039	C17orf99	Q6UX52	265 aa		18.77	■□□□□ 0.6
SPIN3-233	ENST00000640039	CD99L2	Q8TCZ2	262 aa		18.77	■□□□□ 0.6
SPIN3-233	ENST00000640039	RNF41	Q9H4P4	317 aa	Predicted RBP	18.77	■□□□□ 0.6
SPIN3-233	ENST00000640039	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	18.77	■□□□□ 0.6
SPIN3-233	ENST00000640039	TMX2	Q9Y320	296 aa		18.77	■□□□□ 0.6
SPIN3-233	ENST00000640039	USP17L15	C9J2P7	530 aa		18.76	■□□□□ 0.59
SPIN3-233	ENST00000640039	USP17L13	C9JLJ4	530 aa		18.76	■□□□□ 0.59
SPIN3-233	ENST00000640039	USP17L11	C9JVI0	530 aa		18.76	■□□□□ 0.59
SPIN3-233	ENST00000640039	USP17L18	D6R9N7	530 aa		18.76	■□□□□ 0.59
SPIN3-233	ENST00000640039	USP17L22	D6RA61	530 aa		18.76	■□□□□ 0.59
SPIN3-233	ENST00000640039	USP17L17	D6RBQ6	530 aa		18.76	■□□□□ 0.59
SPIN3-233	ENST00000640039	USP17L19	D6RCP7	530 aa		18.76	■□□□□ 0.59
SPIN3-233	ENST00000640039	USP17L20	D6RJB6	530 aa		18.76	■□□□□ 0.59
SPIN3-233	ENST00000640039	SGSM2	O43147	1006 aa		18.76	■□□□□ 0.59
SPIN3-233	ENST00000640039	RANBP6	O60518	1105 aa	Known RBP	18.76	■□□□□ 0.59
SPIN3-233	ENST00000640039	PC	P11498	1178 aa	Known RBP	18.76	■□□□□ 0.59
SPIN3-233	ENST00000640039	GCLC	P48506	637 aa	Predicted RBP	18.76	■□□□□ 0.59
SPIN3-233	ENST00000640039	USP17L24	Q0WX57	530 aa		18.76	■□□□□ 0.59
SPIN3-233	ENST00000640039	IMMT	Q16891	758 aa	Known RBP	18.76	■□□□□ 0.59
SPIN3-233	ENST00000640039	FAM47A	Q5JRC9	791 aa		18.76	■□□□□ 0.59
SPIN3-233	ENST00000640039	RRP12	Q5JTH9	1297 aa	Known RBP	18.76	■□□□□ 0.59
SPIN3-233	ENST00000640039	PPP4R3B	Q5MIZ7	849 aa		18.76	■□□□□ 0.59
SPIN3-233	ENST00000640039	CASC1	Q6TDU7	716 aa		18.76	■□□□□ 0.59
SPIN3-233	ENST00000640039	MFSD6	Q6ZSS7	791 aa		18.76	■□□□□ 0.59
SPIN3-233	ENST00000640039	NEDD1	Q8NHV4	660 aa		18.76	■□□□□ 0.59
SPIN3-233	ENST00000640039	LPAR1	Q92633	364 aa		18.76	■□□□□ 0.59
SPIN3-233	ENST00000640039	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	18.76	■□□□□ 0.59
SPIN3-233	ENST00000640039	IL25	Q9H293	177 aa		18.76	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms