RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 MRS2Q9HD23 443 aa8.13□□□□□ -1.11
ATM-229ENST00000639953 HIF3AQ9Y2N7 669 aa8.13□□□□□ -1.11
ATM-229ENST00000639953 PIK3C2AO00443 1686 aa8.13□□□□□ -1.11
ATM-229ENST00000639953 KTN1Q86UP2 1357 aaKnown RBP8.12□□□□□ -1.11
ATM-229ENST00000639953 AFF2P51816 1311 aa8.12□□□□□ -1.11
ATM-229ENST00000639953 A0A096LPE4 126 aa8.12□□□□□ -1.11
ATM-229ENST00000639953 A0A1W2PPZ6 126 aa8.12□□□□□ -1.11
ATM-229ENST00000639953 TIAF1O95411 115 aa8.12□□□□□ -1.11
ATM-229ENST00000639953 GRIK1P39086 918 aa8.12□□□□□ -1.11
ATM-229ENST00000639953 GRIA4P48058 902 aa8.12□□□□□ -1.11
ATM-229ENST00000639953 NFKBIBQ15653 356 aa8.12□□□□□ -1.11
ATM-229ENST00000639953 FBXL6Q8N531 539 aa8.12□□□□□ -1.11
ATM-229ENST00000639953 PNISRQ8TF01 805 aaKnown RBP8.12□□□□□ -1.11
ATM-229ENST00000639953 FBLIM1Q8WUP2 373 aa8.12□□□□□ -1.11
ATM-229ENST00000639953 SOX17Q9H6I2 414 aaPredicted RBP8.12□□□□□ -1.11
ATM-229ENST00000639953 CYP4F12Q9HCS2 524 aa8.12□□□□□ -1.11
ATM-229ENST00000639953 SSH2Q76I76 1423 aa8.12□□□□□ -1.11
ATM-229ENST00000639953 PLCH1Q4KWH8 1693 aa8.11□□□□□ -1.11
ATM-229ENST00000639953 A0A1W2PP64 1363 aa8.11□□□□□ -1.11
ATM-229ENST00000639953 TTC21BQ7Z4L5 1316 aa8.11□□□□□ -1.11
ATM-229ENST00000639953 ICMTO60725 284 aa8.11□□□□□ -1.11
ATM-229ENST00000639953 F13BP05160 661 aa8.11□□□□□ -1.11
ATM-229ENST00000639953 CTSBP07858 339 aa8.11□□□□□ -1.11
ATM-229ENST00000639953 SERPINB4P48594 390 aa8.11□□□□□ -1.11
ATM-229ENST00000639953 IRX6P78412 446 aaPredicted RBP8.11□□□□□ -1.11
ATM-229ENST00000639953 DTX1Q86Y01 620 aa8.11□□□□□ -1.11
ATM-229ENST00000639953 KRTAP1-3Q8IUG1 177 aa8.11□□□□□ -1.11
ATM-229ENST00000639953 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.11□□□□□ -1.11
ATM-229ENST00000639953 GALNT12Q8IXK2 581 aa8.11□□□□□ -1.11
ATM-229ENST00000639953 TCF12Q99081 682 aa8.11□□□□□ -1.11
ATM-229ENST00000639953 SUGCTQ9HAC7 445 aa8.11□□□□□ -1.11
ATM-229ENST00000639953 HDGFL2Q7Z4V5 671 aaPredicted RBP8.1□□□□□ -1.11
ATM-229ENST00000639953 NME9Q86XW9 330 aa8.1□□□□□ -1.11
ATM-229ENST00000639953 CCNJLQ8IV13 435 aa8.1□□□□□ -1.11
ATM-229ENST00000639953 PUS7Q96PZ0 661 aaKnown RBP8.1□□□□□ -1.11
ATM-229ENST00000639953 NRSN2Q9GZP1 204 aa8.1□□□□□ -1.11
ATM-229ENST00000639953 FAM95CA0A1B0GW59 222 aa8.09□□□□□ -1.11
ATM-229ENST00000639953 FAM83GA6ND36 823 aa8.09□□□□□ -1.11
ATM-229ENST00000639953 TAL1P17542 331 aaPredicted RBP8.09□□□□□ -1.11
ATM-229ENST00000639953 IRAK1P51617 712 aa8.09□□□□□ -1.11
ATM-229ENST00000639953 USP11P51784 963 aa8.09□□□□□ -1.11
ATM-229ENST00000639953 ZC3H6P61129 1189 aaKnown RBP8.09□□□□□ -1.11
ATM-229ENST00000639953 SOX4Q06945 474 aaPredicted RBP8.09□□□□□ -1.11
ATM-229ENST00000639953 PCDH1Q08174 1060 aa8.09□□□□□ -1.11
ATM-229ENST00000639953 CHRNA2Q15822 529 aa8.09□□□□□ -1.11
ATM-229ENST00000639953 CC2D1BQ5T0F9 858 aaKnown RBP8.09□□□□□ -1.11
ATM-229ENST00000639953 C2CD4AQ8NCU7 369 aaPredicted RBP8.09□□□□□ -1.11
ATM-229ENST00000639953 LIN7BQ9HAP6 207 aa8.09□□□□□ -1.11
ATM-229ENST00000639953 TERF2IPQ9NYB0 399 aa8.09□□□□□ -1.11
ATM-229ENST00000639953 USP19O94966 1318 aa8.08□□□□□ -1.12
ATM-229ENST00000639953 ZBTB7CA1YPR0 619 aa8.08□□□□□ -1.12
ATM-229ENST00000639953 MAOBP27338 520 aa8.08□□□□□ -1.12
ATM-229ENST00000639953 ADMP35318 185 aa8.08□□□□□ -1.12
ATM-229ENST00000639953 CLEC4MQ9H2X3 399 aaPredicted RBP8.08□□□□□ -1.12
ATM-229ENST00000639953 ATG3Q9NT62 314 aa8.08□□□□□ -1.12
ATM-229ENST00000639953 PIM2Q9P1W9 311 aa8.08□□□□□ -1.12
ATM-229ENST00000639953 BRPF3Q9ULD4 1205 aa8.08□□□□□ -1.12
ATM-229ENST00000639953 EDC4Q6P2E9 1401 aaKnown RBP8.08□□□□□ -1.12
ATM-229ENST00000639953 BRD4O60885 1362 aaPredicted RBP8.08□□□□□ -1.12
ATM-229ENST00000639953 ANKRD36BQ8N2N9 1353 aa8.08□□□□□ -1.12
ATM-229ENST00000639953 PARD3Q8TEW0 1356 aa8.08□□□□□ -1.12
ATM-229ENST00000639953 KIAA0232Q92628 1395 aa8.08□□□□□ -1.12
ATM-229ENST00000639953 COL14A1Q05707 1796 aaKnown RBP8.07□□□□□ -1.12
ATM-229ENST00000639953 BCL9LQ86UU0 1499 aa8.07□□□□□ -1.12
ATM-229ENST00000639953 TTC21AQ8NDW8 1320 aa8.07□□□□□ -1.12
ATM-229ENST00000639953 NRAPQ86VF7 1730 aa8.07□□□□□ -1.12
ATM-229ENST00000639953 H3BRB1 525 aa8.07□□□□□ -1.12
ATM-229ENST00000639953 ECEL1O95672 775 aa8.07□□□□□ -1.12
ATM-229ENST00000639953 WNT11O96014 354 aa8.07□□□□□ -1.12
ATM-229ENST00000639953 GCP02774 474 aa8.07□□□□□ -1.12
ATM-229ENST00000639953 ORC1Q13415 861 aa8.07□□□□□ -1.12
ATM-229ENST00000639953 ZNF772Q68DY9 489 aaPredicted RBP8.07□□□□□ -1.12
ATM-229ENST00000639953 TUT1Q9H6E5 874 aaKnown RBP8.07□□□□□ -1.12
ATM-229ENST00000639953 KIF20BQ96Q89 1820 aa8.07□□□□□ -1.12
ATM-229ENST00000639953 SLIT3O75094 1523 aa8.07□□□□□ -1.12
ATM-229ENST00000639953 NINLQ9Y2I6 1382 aa8.07□□□□□ -1.12
ATM-229ENST00000639953 RGPD5Q99666 1765 aa8.07□□□□□ -1.12
ATM-229ENST00000639953 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.06□□□□□ -1.12
ATM-229ENST00000639953 NWD2Q9ULI1 1742 aa8.06□□□□□ -1.12
ATM-229ENST00000639953 USP54Q70EL1 1684 aa8.06□□□□□ -1.12
ATM-229ENST00000639953 ARHGAP4P98171 946 aa8.06□□□□□ -1.12
ATM-229ENST00000639953 LCE3BQ5TA77 95 aa8.06□□□□□ -1.12
ATM-229ENST00000639953 OSBPL1AQ9BXW6 950 aa8.06□□□□□ -1.12
ATM-229ENST00000639953 PRDM11Q9NQV5 511 aa8.06□□□□□ -1.12
ATM-229ENST00000639953 BTG4Q9NY30 223 aa8.06□□□□□ -1.12
ATM-229ENST00000639953 EGFL7Q9UHF1 273 aa8.06□□□□□ -1.12
ATM-229ENST00000639953 LEMD3Q9Y2U8 911 aa8.06□□□□□ -1.12
ATM-229ENST00000639953 SLIT2O94813 1529 aa8.06□□□□□ -1.12
ATM-229ENST00000639953 ATRNO75882 1429 aa8.05□□□□□ -1.12
ATM-229ENST00000639953 NSD3Q9BZ95 1437 aa8.05□□□□□ -1.12
ATM-229ENST00000639953 LTN1O94822 1766 aa8.05□□□□□ -1.12
ATM-229ENST00000639953 NFAT5O94916 1531 aa8.05□□□□□ -1.12
ATM-229ENST00000639953 FBLN1P23142 703 aa8.05□□□□□ -1.12
ATM-229ENST00000639953 POU4F3Q15319 338 aa8.05□□□□□ -1.12
ATM-229ENST00000639953 KIAA0319Q5VV43 1072 aa8.05□□□□□ -1.12
ATM-229ENST00000639953 PAOXQ6QHF9 649 aa8.05□□□□□ -1.12
ATM-229ENST00000639953 KRTAP19-1Q8IUB9 90 aa8.05□□□□□ -1.12
ATM-229ENST00000639953 GLYCTKQ8IVS8 523 aa8.05□□□□□ -1.12
ATM-229ENST00000639953 USP31Q70CQ4 1352 aa8.05□□□□□ -1.12
ATM-229ENST00000639953 LMO7Q8WWI1 1683 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms