RNA–Protein interactions for RNA: ENST00000639667.1

HNRNPU-220, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 2

Gene HNRNPU, Length 3,940 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-220ENST00000639667 CCDC178Q5BJE1 867 aa6.8□□□□□ -1.32
HNRNPU-220ENST00000639667 CATIPQ7Z7H3 387 aa6.8□□□□□ -1.32
HNRNPU-220ENST00000639667 ACER1Q8TDN7 264 aa6.8□□□□□ -1.32
HNRNPU-220ENST00000639667 ZSCAN10Q96SZ4 725 aaPredicted RBP6.8□□□□□ -1.32
HNRNPU-220ENST00000639667 DNAJC18Q9H819 358 aa6.8□□□□□ -1.32
HNRNPU-220ENST00000639667 USP17L10C9JJH3 530 aa6.8□□□□□ -1.32
HNRNPU-220ENST00000639667 FOXP2O15409 715 aa6.8□□□□□ -1.32
HNRNPU-220ENST00000639667 HMGB1P09429 215 aaKnown RBP6.8□□□□□ -1.32
HNRNPU-220ENST00000639667 RRP1BQ14684 758 aaKnown RBP6.8□□□□□ -1.32
HNRNPU-220ENST00000639667 PPP4R3BQ5MIZ7 849 aa6.8□□□□□ -1.32
HNRNPU-220ENST00000639667 Q6ZUG5 572 aa6.8□□□□□ -1.32
HNRNPU-220ENST00000639667 STOX1Q6ZVD7 989 aa6.8□□□□□ -1.32
HNRNPU-220ENST00000639667 MICU3Q86XE3 530 aa6.8□□□□□ -1.32
HNRNPU-220ENST00000639667 ZNF280CQ8ND82 737 aa6.8□□□□□ -1.32
HNRNPU-220ENST00000639667 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.8□□□□□ -1.32
HNRNPU-220ENST00000639667 BRF1Q92994 677 aa6.8□□□□□ -1.32
HNRNPU-220ENST00000639667 CAPNS2Q96L46 248 aa6.8□□□□□ -1.32
HNRNPU-220ENST00000639667 GOPCQ9HD26 462 aa6.8□□□□□ -1.32
HNRNPU-220ENST00000639667 SLC12A7Q9Y666 1083 aa6.8□□□□□ -1.32
HNRNPU-220ENST00000639667 TNKSO95271 1327 aa6.8□□□□□ -1.32
HNRNPU-220ENST00000639667 CPLX1O14810 134 aa6.8□□□□□ -1.32
HNRNPU-220ENST00000639667 ST18O60284 1047 aa6.8□□□□□ -1.32
HNRNPU-220ENST00000639667 TBC1D12O60347 775 aa6.8□□□□□ -1.32
HNRNPU-220ENST00000639667 PPFIA3O75145 1194 aa6.8□□□□□ -1.32
HNRNPU-220ENST00000639667 TTLL1O95922 423 aa6.8□□□□□ -1.32
HNRNPU-220ENST00000639667 PTPRAP18433 802 aa6.8□□□□□ -1.32
HNRNPU-220ENST00000639667 PLS1Q14651 629 aa6.8□□□□□ -1.32
HNRNPU-220ENST00000639667 SLFN13Q68D06 897 aa6.8□□□□□ -1.32
HNRNPU-220ENST00000639667 CYB5R4Q7L1T6 521 aa6.8□□□□□ -1.32
HNRNPU-220ENST00000639667 DHX32Q7L7V1 743 aaKnown RBP6.8□□□□□ -1.32
HNRNPU-220ENST00000639667 SMCR8Q8TEV9 937 aaPredicted RBP6.8□□□□□ -1.32
HNRNPU-220ENST00000639667 CCDC102AQ96A19 550 aa6.8□□□□□ -1.32
HNRNPU-220ENST00000639667 PAGR1Q9BTK6 254 aa6.8□□□□□ -1.32
HNRNPU-220ENST00000639667 MYL10Q9BUA6 226 aa6.8□□□□□ -1.32
HNRNPU-220ENST00000639667 GPHNQ9NQX3 736 aaPredicted RBP6.8□□□□□ -1.32
HNRNPU-220ENST00000639667 KLF18A0A0U1RQI7 1052 aa6.79□□□□□ -1.32
HNRNPU-220ENST00000639667 ORC4O43929 436 aa6.79□□□□□ -1.32
HNRNPU-220ENST00000639667 AOC2O75106 756 aa6.79□□□□□ -1.32
HNRNPU-220ENST00000639667 SLC1A4P43007 532 aa6.79□□□□□ -1.32
HNRNPU-220ENST00000639667 AKAP17AQ02040 695 aaKnown RBP6.79□□□□□ -1.32
HNRNPU-220ENST00000639667 SNAPC2Q13487 334 aa6.79□□□□□ -1.32
HNRNPU-220ENST00000639667 SAPCD2Q86UD0 394 aa6.79□□□□□ -1.32
HNRNPU-220ENST00000639667 SPRYD3Q8NCJ5 442 aa6.79□□□□□ -1.32
HNRNPU-220ENST00000639667 NEDD1Q8NHV4 660 aa6.79□□□□□ -1.32
HNRNPU-220ENST00000639667 MYO5AQ9Y4I1 1855 aaKnown RBP6.79□□□□□ -1.32
HNRNPU-220ENST00000639667 FRMPD2Q68DX3 1309 aaPredicted RBP6.79□□□□□ -1.32
HNRNPU-220ENST00000639667 IRF6O14896 467 aa6.79□□□□□ -1.32
HNRNPU-220ENST00000639667 PCP11498 1178 aaKnown RBP6.79□□□□□ -1.32
HNRNPU-220ENST00000639667 CCT2P78371 535 aaKnown RBP6.79□□□□□ -1.32
HNRNPU-220ENST00000639667 APOBRQ0VD83 1088 aa6.79□□□□□ -1.32
HNRNPU-220ENST00000639667 OTUD7BQ6GQQ9 843 aa6.79□□□□□ -1.32
HNRNPU-220ENST00000639667 CTCFLQ8NI51 663 aaPredicted RBP6.79□□□□□ -1.32
HNRNPU-220ENST00000639667 WNK4Q96J92 1243 aa6.79□□□□□ -1.32
HNRNPU-220ENST00000639667 NUP88Q99567 741 aaPredicted RBP6.79□□□□□ -1.32
HNRNPU-220ENST00000639667 ANAPC4Q9UJX5 808 aa6.79□□□□□ -1.32
HNRNPU-220ENST00000639667 SNCAIPQ9Y6H5 919 aa6.79□□□□□ -1.32
HNRNPU-220ENST00000639667 ADAMTSL1Q8N6G6 1762 aa6.79□□□□□ -1.32
HNRNPU-220ENST00000639667 ATRNL1Q5VV63 1379 aa6.79□□□□□ -1.32
HNRNPU-220ENST00000639667 GOLGA8BA8MQT2 603 aa6.79□□□□□ -1.32
HNRNPU-220ENST00000639667 GOLGA8HP0CJ92 632 aa6.79□□□□□ -1.32
HNRNPU-220ENST00000639667 TOP1P11387 765 aaKnown RBP6.79□□□□□ -1.32
HNRNPU-220ENST00000639667 USP14P54578 494 aa6.79□□□□□ -1.32
HNRNPU-220ENST00000639667 JAG1P78504 1218 aa6.79□□□□□ -1.32
HNRNPU-220ENST00000639667 KIF23Q02241 960 aaPredicted RBP6.79□□□□□ -1.32
HNRNPU-220ENST00000639667 GABPAQ06546 454 aa6.79□□□□□ -1.32
HNRNPU-220ENST00000639667 DGKZQ13574 1117 aa6.79□□□□□ -1.32
HNRNPU-220ENST00000639667 CREBZFQ9NS37 354 aa6.79□□□□□ -1.32
HNRNPU-220ENST00000639667 FOXD4L1Q9NU39 408 aa6.79□□□□□ -1.32
HNRNPU-220ENST00000639667 TLL2Q9Y6L7 1015 aa6.79□□□□□ -1.32
HNRNPU-220ENST00000639667 WDR90Q96KV7 1748 aa6.78□□□□□ -1.32
HNRNPU-220ENST00000639667 GOLGA8AA7E2F4 631 aa6.78□□□□□ -1.32
HNRNPU-220ENST00000639667 FLOT1O75955 427 aa6.78□□□□□ -1.32
HNRNPU-220ENST00000639667 HSPA6P17066 643 aa6.78□□□□□ -1.32
HNRNPU-220ENST00000639667 FOSBP53539 338 aa6.78□□□□□ -1.32
HNRNPU-220ENST00000639667 KCTD1Q719H9 257 aa6.78□□□□□ -1.32
HNRNPU-220ENST00000639667 PNMA1Q8ND90 353 aa6.78□□□□□ -1.32
HNRNPU-220ENST00000639667 KIFC2Q96AC6 838 aa6.78□□□□□ -1.32
HNRNPU-220ENST00000639667 MTMR4Q9NYA4 1195 aa6.78□□□□□ -1.32
HNRNPU-220ENST00000639667 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.78□□□□□ -1.32
HNRNPU-220ENST00000639667 TMEM232C9JQI7 657 aa6.78□□□□□ -1.32
HNRNPU-220ENST00000639667 CETPP11597 493 aa6.78□□□□□ -1.32
HNRNPU-220ENST00000639667 RPS6KB1P23443 525 aa6.78□□□□□ -1.32
HNRNPU-220ENST00000639667 GTF2A2P52657 109 aa6.78□□□□□ -1.32
HNRNPU-220ENST00000639667 PPATQ06203 517 aa6.78□□□□□ -1.32
HNRNPU-220ENST00000639667 CPLX2Q6PUV4 134 aaKnown RBP6.78□□□□□ -1.32
HNRNPU-220ENST00000639667 USP17L2Q6R6M4 530 aa6.78□□□□□ -1.32
HNRNPU-220ENST00000639667 HOMER1Q86YM7 354 aa6.78□□□□□ -1.32
HNRNPU-220ENST00000639667 CPXCR1Q8N123 301 aa6.78□□□□□ -1.32
HNRNPU-220ENST00000639667 TMEM47Q9BQJ4 181 aa6.78□□□□□ -1.32
HNRNPU-220ENST00000639667 NBPF3Q9H094 633 aa6.78□□□□□ -1.32
HNRNPU-220ENST00000639667 PHF20L1A8MW92 1017 aa6.78□□□□□ -1.32
HNRNPU-220ENST00000639667 TAF1CQ15572 869 aaPredicted RBP6.78□□□□□ -1.32
HNRNPU-220ENST00000639667 FAM83BQ5T0W9 1011 aa6.78□□□□□ -1.32
HNRNPU-220ENST00000639667 SPRYD7Q5W111 196 aa6.78□□□□□ -1.32
HNRNPU-220ENST00000639667 TATDN1Q6P1N9 297 aa6.78□□□□□ -1.32
HNRNPU-220ENST00000639667 RUFY3Q7L099 469 aa6.78□□□□□ -1.32
HNRNPU-220ENST00000639667 TMEM87BQ96K49 555 aa6.78□□□□□ -1.32
HNRNPU-220ENST00000639667 SLKQ9H2G2 1235 aaPredicted RBP6.78□□□□□ -1.32
HNRNPU-220ENST00000639667 TACC3Q9Y6A5 838 aa6.78□□□□□ -1.32
HNRNPU-220ENST00000639667 SCN4AP35499 1836 aa6.77□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms