RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 RNF123Q5XPI4 1314 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 RHOXF2BP0C7M4 288 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 ARHGAP25P42331 645 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 MAGEA10P43363 369 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-209ENST00000639244 MXI1P50539 228 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 RHOXF2Q9BQY4 288 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 RIC8AQ9NPQ8 531 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 MRPL42Q9Y6G3 142 aaKnown RBP4.79□□□□□ -1.64
SCN3A-209ENST00000639244 GPTP24298 496 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 FNTAP49354 379 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 NFX1Q12986 1120 aaKnown RBP4.79□□□□□ -1.64
SCN3A-209ENST00000639244 ACAP1Q15027 740 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 SLC44A4Q53GD3 710 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 BEND5Q7L4P6 421 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 PPHLN1Q8NEY8 458 aaKnown RBP4.79□□□□□ -1.64
SCN3A-209ENST00000639244 PDLIM2Q96JY6 352 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 GAKO14976 1311 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 LRRIQ3A6PVS8 624 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-209ENST00000639244 ZSCAN12O43309 604 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 B4GALNT4Q76KP1 1039 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 CCDC155Q8N6L0 562 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 MGARPQ8TDB4 240 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 CACTINQ8WUQ7 758 aaKnown RBP4.79□□□□□ -1.64
SCN3A-209ENST00000639244 RBM41Q96IZ5 413 aaKnown RBP4.79□□□□□ -1.64
SCN3A-209ENST00000639244 MAML3Q96JK9 1138 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.79□□□□□ -1.64
SCN3A-209ENST00000639244 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-209ENST00000639244 AGTPBP1Q9UPW5 1226 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 RRBP1Q9P2E9 1410 aaKnown RBP4.79□□□□□ -1.64
SCN3A-209ENST00000639244 S100A6P06703 90 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 COL6A1P12109 1028 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 TCF7P36402 384 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-209ENST00000639244 OLR1P78380 273 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 PPIDQ08752 370 aaKnown RBP4.79□□□□□ -1.64
SCN3A-209ENST00000639244 SNCBQ16143 134 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 ZC3H12BQ5HYM0 836 aaKnown RBP4.79□□□□□ -1.64
SCN3A-209ENST00000639244 NR1H4Q96RI1 486 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-209ENST00000639244 CCSER2Q9H7U1 834 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 CNPY2Q9Y2B0 182 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 KIAA1107Q9UPP5 1409 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 PAHP00439 452 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 GUCY2FP51841 1108 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 PMS2P54278 862 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 CATSPER4Q7RTX7 472 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 SELENOOQ9BVL4 669 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 EID1Q9Y6B2 187 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 SMIM24O75264 130 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 CD9P21926 228 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 HSD3B2P26439 372 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 TXLNAP40222 546 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 TSPAN7P41732 249 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 KIF1BPQ96EK5 621 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 PARVGQ9HBI0 331 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 CUEDC1Q9NWM3 386 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-209ENST00000639244 AIPL1Q9NZN9 384 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 TP53BP1Q12888 1972 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-209ENST00000639244 MYH4Q9Y623 1939 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 IQANK1A0A1B0GTG1 560 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 STXBP3O00186 592 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 TSPAN9O75954 239 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 USP4Q13107 963 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 CEP78Q5JTW2 689 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 CFAP157Q5JU67 520 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 CCDC83Q8IWF9 413 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 SPATA18Q8TC71 538 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 SIL1Q9H173 461 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 CYLDQ9NQC7 956 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 CIDEBQ9UHD4 219 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 R3HDM2Q9Y2K5 976 aaKnown RBP4.79□□□□□ -1.64
SCN3A-209ENST00000639244 KIAA1217Q5T5P2 1943 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 CROCCQ5TZA2 2017 aa4.79□□□□□ -1.64
SCN3A-209ENST00000639244 SMG6Q86US8 1419 aaKnown RBP4.78□□□□□ -1.64
SCN3A-209ENST00000639244 RASSF10A6NK89 507 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 BAIAP3O94812 1187 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 PLIN5Q00G26 463 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 CCDC153Q494R4 210 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 NEK5Q6P3R8 708 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 PBXIP1Q96AQ6 731 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 C8orf48Q96LL4 319 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.78□□□□□ -1.64
SCN3A-209ENST00000639244 ATP11BQ9Y2G3 1177 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 CETN3O15182 167 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 ENDOUP21128 410 aaKnown RBP4.78□□□□□ -1.64
SCN3A-209ENST00000639244 PUM3Q15397 648 aaKnown RBP4.78□□□□□ -1.64
SCN3A-209ENST00000639244 RILPL1Q5EBL4 403 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 NLRP14Q86W24 1093 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 BICC1Q9H694 974 aaKnown RBP4.78□□□□□ -1.64
SCN3A-209ENST00000639244 RYDENQ9NUL5 291 aaKnown RBP4.78□□□□□ -1.64
SCN3A-209ENST00000639244 ZNF446Q9NWS9 450 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 SH3GLB1Q9Y371 365 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 UHRF1BP1LA0JNW5 1464 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 RUNX1T1Q06455 604 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 PPP1R7Q15435 360 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 KLHL40Q2TBA0 621 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 IFFO2Q5TF58 517 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 NCCRP1Q6ZVX7 275 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-209ENST00000639244 ANKK1Q8NFD2 765 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 TCEA3O75764 348 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 CETN2P41208 172 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 SKIV2L2P42285 1042 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms