RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 ABL1P00519 1130 aa12.41□□□□□ -0.42
SNIP1-204ENST00000638725 IL2RBP14784 551 aa12.41□□□□□ -0.42
SNIP1-204ENST00000638725 FXR1P51114 621 aaKnown RBP eCLIP12.41□□□□□ -0.42
SNIP1-204ENST00000638725 MAP3K12Q12852 859 aa12.41□□□□□ -0.42
SNIP1-204ENST00000638725 KIF4BQ2VIQ3 1234 aa12.41□□□□□ -0.42
SNIP1-204ENST00000638725 CDKAL1Q5VV42 579 aa12.41□□□□□ -0.42
SNIP1-204ENST00000638725 SLC35F6Q8N357 371 aa12.41□□□□□ -0.42
SNIP1-204ENST00000638725 FANCBQ8NB91 859 aa12.41□□□□□ -0.42
SNIP1-204ENST00000638725 STAG1Q8WVM7 1258 aa12.41□□□□□ -0.42
SNIP1-204ENST00000638725 PAGE5Q96GU1 130 aa12.41□□□□□ -0.42
SNIP1-204ENST00000638725 CDC5LQ99459 802 aaKnown RBP12.41□□□□□ -0.42
SNIP1-204ENST00000638725 NAA15Q9BXJ9 866 aaKnown RBP12.41□□□□□ -0.42
SNIP1-204ENST00000638725 AATFQ9NY61 560 aaKnown RBP eCLIP12.41□□□□□ -0.42
SNIP1-204ENST00000638725 TMOD3Q9NYL9 352 aa12.41□□□□□ -0.42
SNIP1-204ENST00000638725 TIAM2Q8IVF5 1701 aa12.4□□□□□ -0.42
SNIP1-204ENST00000638725 WNT7AO00755 349 aa12.4□□□□□ -0.42
SNIP1-204ENST00000638725 GYPCP04921 128 aa12.4□□□□□ -0.42
SNIP1-204ENST00000638725 LMAN1P49257 510 aa12.4□□□□□ -0.42
SNIP1-204ENST00000638725 MCM6Q14566 821 aa12.4□□□□□ -0.42
SNIP1-204ENST00000638725 PUM3Q15397 648 aaKnown RBP12.4□□□□□ -0.42
SNIP1-204ENST00000638725 MUM1L1Q5H9M0 696 aa12.4□□□□□ -0.42
SNIP1-204ENST00000638725 BEND6Q5SZJ8 279 aaPredicted RBP12.4□□□□□ -0.42
SNIP1-204ENST00000638725 RASGRP2Q7LDG7 609 aa12.4□□□□□ -0.42
SNIP1-204ENST00000638725 CEP112Q8N8E3 955 aa12.4□□□□□ -0.42
SNIP1-204ENST00000638725 LPIN2Q92539 896 aa12.4□□□□□ -0.42
SNIP1-204ENST00000638725 STAMQ92783 540 aa12.4□□□□□ -0.42
SNIP1-204ENST00000638725 SYMPKQ92797 1274 aaKnown RBP12.4□□□□□ -0.42
SNIP1-204ENST00000638725 SUGCTQ9HAC7 445 aa12.4□□□□□ -0.42
SNIP1-204ENST00000638725 VPS54Q9P1Q0 977 aa12.4□□□□□ -0.42
SNIP1-204ENST00000638725 TRMT112Q9UI30 125 aaKnown RBP12.4□□□□□ -0.42
SNIP1-204ENST00000638725 SLC4A4Q9Y6R1 1079 aa12.4□□□□□ -0.42
SNIP1-204ENST00000638725 hCG_1642624A0A1W2PR95 340 aa12.4□□□□□ -0.43
SNIP1-204ENST00000638725 TRIM75PA6NK02 468 aa12.4□□□□□ -0.43
SNIP1-204ENST00000638725 FGFR2P21802 821 aa12.4□□□□□ -0.43
SNIP1-204ENST00000638725 DPYDQ12882 1025 aa12.4□□□□□ -0.43
SNIP1-204ENST00000638725 ZSCAN26Q16670 478 aa12.4□□□□□ -0.43
SNIP1-204ENST00000638725 SH3RF1Q7Z6J0 888 aa12.4□□□□□ -0.43
SNIP1-204ENST00000638725 PDE11AQ9HCR9 933 aa12.4□□□□□ -0.43
SNIP1-204ENST00000638725 CCDC196A0A1B0GTZ2 297 aa12.39□□□□□ -0.43
SNIP1-204ENST00000638725 PPP1R3GB7ZBB8 358 aa12.39□□□□□ -0.43
SNIP1-204ENST00000638725 PRDM1O75626 825 aa12.39□□□□□ -0.43
SNIP1-204ENST00000638725 CCT6AP40227 531 aaKnown RBP12.39□□□□□ -0.43
SNIP1-204ENST00000638725 MIGA1Q8NAN2 632 aa12.39□□□□□ -0.43
SNIP1-204ENST00000638725 RHOXF2BP0C7M4 288 aa12.39□□□□□ -0.43
SNIP1-204ENST00000638725 CDC25AP30304 524 aa12.39□□□□□ -0.43
SNIP1-204ENST00000638725 ERVK-24P63145 666 aa12.39□□□□□ -0.43
SNIP1-204ENST00000638725 FILIP1LQ4L180 1135 aa12.39□□□□□ -0.43
SNIP1-204ENST00000638725 MSANTD4Q8NCY6 345 aa12.39□□□□□ -0.43
SNIP1-204ENST00000638725 EXOC4Q96A65 974 aa12.39□□□□□ -0.43
SNIP1-204ENST00000638725 AK7Q96M32 723 aa12.39□□□□□ -0.43
SNIP1-204ENST00000638725 RHOXF2Q9BQY4 288 aa12.39□□□□□ -0.43
SNIP1-204ENST00000638725 ABCB6Q9NP58 842 aa12.39□□□□□ -0.43
SNIP1-204ENST00000638725 RAB21Q9UL25 225 aa12.39□□□□□ -0.43
SNIP1-204ENST00000638725 CTNND2Q9UQB3 1225 aa12.39□□□□□ -0.43
SNIP1-204ENST00000638725 CTAGE9A4FU28 777 aa12.38□□□□□ -0.43
SNIP1-204ENST00000638725 SMIM22K7EJ46 135 aa12.38□□□□□ -0.43
SNIP1-204ENST00000638725 NOM1Q5C9Z4 860 aaKnown RBP12.38□□□□□ -0.43
SNIP1-204ENST00000638725 WWC2Q6AWC2 1192 aa12.38□□□□□ -0.43
SNIP1-204ENST00000638725 HNRNPLLQ8WVV9 542 aaKnown RBP12.38□□□□□ -0.43
SNIP1-204ENST00000638725 CTAGE1Q96RT6 745 aa12.38□□□□□ -0.43
SNIP1-204ENST00000638725 SHANK3Q9BYB0 1731 aa12.38□□□□□ -0.43
SNIP1-204ENST00000638725 TOGARAM1Q9Y4F4 1720 aa12.38□□□□□ -0.43
SNIP1-204ENST00000638725 PDE8AO60658 829 aa12.38□□□□□ -0.43
SNIP1-204ENST00000638725 N4BP1O75113 896 aaKnown RBP12.38□□□□□ -0.43
SNIP1-204ENST00000638725 USP5P45974 858 aa12.38□□□□□ -0.43
SNIP1-204ENST00000638725 CNGA4Q8IV77 575 aa12.38□□□□□ -0.43
SNIP1-204ENST00000638725 UBAC1Q9BSL1 405 aa12.38□□□□□ -0.43
SNIP1-204ENST00000638725 NACAP1Q9BZK3 213 aa12.38□□□□□ -0.43
SNIP1-204ENST00000638725 VPS18Q9P253 973 aa12.38□□□□□ -0.43
SNIP1-204ENST00000638725 MYH3P11055 1940 aa12.38□□□□□ -0.43
SNIP1-204ENST00000638725 RNF225M0QZC1 329 aaPredicted RBP12.37□□□□□ -0.43
SNIP1-204ENST00000638725 STARD3NLO95772 234 aa12.37□□□□□ -0.43
SNIP1-204ENST00000638725 SLC5A1P13866 664 aa12.37□□□□□ -0.43
SNIP1-204ENST00000638725 PKN1Q16512 942 aa12.37□□□□□ -0.43
SNIP1-204ENST00000638725 CT47A1Q5JQC4 288 aaPredicted RBP12.37□□□□□ -0.43
SNIP1-204ENST00000638725 PIGBQ92521 554 aa12.37□□□□□ -0.43
SNIP1-204ENST00000638725 GSDMAQ96QA5 445 aa12.37□□□□□ -0.43
SNIP1-204ENST00000638725 RNF26Q9BY78 433 aaPredicted RBP12.37□□□□□ -0.43
SNIP1-204ENST00000638725 FEZ2Q9UHY8 353 aaPredicted RBP12.37□□□□□ -0.43
SNIP1-204ENST00000638725 L1RE1Q9UN81 338 aa12.37□□□□□ -0.43
SNIP1-204ENST00000638725 TTF2Q9UNY4 1162 aaKnown RBP12.37□□□□□ -0.43
SNIP1-204ENST00000638725 COL5A2P05997 1499 aaPredicted RBP12.37□□□□□ -0.43
SNIP1-204ENST00000638725 TNKSO95271 1327 aa12.37□□□□□ -0.43
SNIP1-204ENST00000638725 VGLL3A8MV65 326 aa12.37□□□□□ -0.43
SNIP1-204ENST00000638725 POTEB2H3BUK9 544 aa12.37□□□□□ -0.43
SNIP1-204ENST00000638725 KRT2P35908 639 aa12.37□□□□□ -0.43
SNIP1-204ENST00000638725 VSNL1P62760 191 aa12.37□□□□□ -0.43
SNIP1-204ENST00000638725 AKAP17AQ02040 695 aaKnown RBP12.37□□□□□ -0.43
SNIP1-204ENST00000638725 KRT31Q15323 416 aa12.37□□□□□ -0.43
SNIP1-204ENST00000638725 ZNF174Q15697 407 aa12.37□□□□□ -0.43
SNIP1-204ENST00000638725 HDXQ7Z353 690 aa12.37□□□□□ -0.43
SNIP1-204ENST00000638725 TMTC2Q8N394 836 aa12.37□□□□□ -0.43
SNIP1-204ENST00000638725 VPS16Q9H269 839 aa12.37□□□□□ -0.43
SNIP1-204ENST00000638725 BLZF1Q9H2G9 400 aa12.37□□□□□ -0.43
SNIP1-204ENST00000638725 PSD3Q9NYI0 1048 aa12.37□□□□□ -0.43
SNIP1-204ENST00000638725 MYH8P13535 1937 aa12.37□□□□□ -0.43
SNIP1-204ENST00000638725 DOCK2Q92608 1830 aa12.36□□□□□ -0.43
SNIP1-204ENST00000638725 MYH6P13533 1939 aa12.36□□□□□ -0.43
SNIP1-204ENST00000638725 MINDY4BA8MYZ0 360 aa12.36□□□□□ -0.43
SNIP1-204ENST00000638725 SEMA3EO15041 775 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms