RNA–Protein interactions for RNA: ENST00000637968.1

SCN1A-216, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,614 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-216ENST00000637968 SUCLA2Q9P2R7 463 aaPredicted RBP6.37□□□□□ -1.39
SCN1A-216ENST00000637968 SH3GLB1Q9Y371 365 aa6.37□□□□□ -1.39
SCN1A-216ENST00000637968 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.37□□□□□ -1.39
SCN1A-216ENST00000637968 F8VZ95 297 aa6.37□□□□□ -1.39
SCN1A-216ENST00000637968 BIN1O00499 593 aa6.37□□□□□ -1.39
SCN1A-216ENST00000637968 PRC1O43663 620 aa6.37□□□□□ -1.39
SCN1A-216ENST00000637968 SKIP12755 728 aa6.37□□□□□ -1.39
SCN1A-216ENST00000637968 GSPT1P15170 499 aaKnown RBP6.37□□□□□ -1.39
SCN1A-216ENST00000637968 NR1D1P20393 614 aa6.37□□□□□ -1.39
SCN1A-216ENST00000637968 CDC25CP30307 473 aa6.37□□□□□ -1.39
SCN1A-216ENST00000637968 CCT6AP40227 531 aaKnown RBP6.37□□□□□ -1.39
SCN1A-216ENST00000637968 KCTD16Q68DU8 428 aa6.37□□□□□ -1.39
SCN1A-216ENST00000637968 GALNT17Q6IS24 598 aa6.37□□□□□ -1.39
SCN1A-216ENST00000637968 ARMCX5Q6P1M9 558 aa6.37□□□□□ -1.39
SCN1A-216ENST00000637968 ZBTB8BQ8NAP8 495 aaPredicted RBP6.37□□□□□ -1.39
SCN1A-216ENST00000637968 SNRNP27Q8WVK2 155 aaKnown RBP6.37□□□□□ -1.39
SCN1A-216ENST00000637968 CASP10Q92851 521 aa6.37□□□□□ -1.39
SCN1A-216ENST00000637968 NAF1Q96HR8 494 aaKnown RBP6.37□□□□□ -1.39
SCN1A-216ENST00000637968 DHRS1Q96LJ7 313 aa6.37□□□□□ -1.39
SCN1A-216ENST00000637968 WDR24Q96S15 920 aa6.37□□□□□ -1.39
SCN1A-216ENST00000637968 PNKPQ96T60 521 aa6.37□□□□□ -1.39
SCN1A-216ENST00000637968 NAA15Q9BXJ9 866 aaKnown RBP6.37□□□□□ -1.39
SCN1A-216ENST00000637968 GGA2Q9UJY4 613 aa6.37□□□□□ -1.39
SCN1A-216ENST00000637968 TEX14Q8IWB6 1497 aa6.37□□□□□ -1.39
SCN1A-216ENST00000637968 HARSP12081 509 aaKnown RBP6.37□□□□□ -1.39
SCN1A-216ENST00000637968 LSP1P33241 339 aa6.37□□□□□ -1.39
SCN1A-216ENST00000637968 POSTNQ15063 836 aa6.37□□□□□ -1.39
SCN1A-216ENST00000637968 ACCSLQ4AC99 568 aa6.37□□□□□ -1.39
SCN1A-216ENST00000637968 DAAM2Q86T65 1068 aa6.37□□□□□ -1.39
SCN1A-216ENST00000637968 CARD9Q9H257 536 aa6.37□□□□□ -1.39
SCN1A-216ENST00000637968 MTMR6Q9Y217 621 aa6.37□□□□□ -1.39
SCN1A-216ENST00000637968 CARD8Q9Y2G2 431 aa6.37□□□□□ -1.39
SCN1A-216ENST00000637968 RALGAPBQ86X10 1494 aa6.37□□□□□ -1.39
SCN1A-216ENST00000637968 DCAF8L1A6NGE4 600 aa6.37□□□□□ -1.39
SCN1A-216ENST00000637968 PFKFB2O60825 505 aa6.37□□□□□ -1.39
SCN1A-216ENST00000637968 TACC1O75410 805 aa6.37□□□□□ -1.39
SCN1A-216ENST00000637968 PPP1R15BQ5SWA1 713 aa6.37□□□□□ -1.39
SCN1A-216ENST00000637968 TLDC1Q6P9B6 456 aa6.37□□□□□ -1.39
SCN1A-216ENST00000637968 POTEEQ6S8J3 1075 aa6.37□□□□□ -1.39
SCN1A-216ENST00000637968 SAPCD2Q86UD0 394 aa6.37□□□□□ -1.39
SCN1A-216ENST00000637968 ERMNQ8TAM6 284 aa6.37□□□□□ -1.39
SCN1A-216ENST00000637968 WDR60Q8WVS4 1066 aa6.37□□□□□ -1.39
SCN1A-216ENST00000637968 PPP1R14BQ96C90 147 aa6.37□□□□□ -1.39
SCN1A-216ENST00000637968 ABHD8Q96I13 439 aa6.37□□□□□ -1.39
SCN1A-216ENST00000637968 CAPZA3Q96KX2 299 aa6.37□□□□□ -1.39
SCN1A-216ENST00000637968 NDNQ99608 321 aa6.37□□□□□ -1.39
SCN1A-216ENST00000637968 SIKE1Q9BRV8 207 aa6.37□□□□□ -1.39
SCN1A-216ENST00000637968 DLGAP2Q9P1A6 1054 aa6.37□□□□□ -1.39
SCN1A-216ENST00000637968 IQGAP2Q13576 1575 aa6.36□□□□□ -1.39
SCN1A-216ENST00000637968 FAM107AO95990 144 aa6.36□□□□□ -1.39
SCN1A-216ENST00000637968 CCDC166P0CW27 439 aa6.36□□□□□ -1.39
SCN1A-216ENST00000637968 GNAT2P19087 354 aa6.36□□□□□ -1.39
SCN1A-216ENST00000637968 SCTRP47872 440 aa6.36□□□□□ -1.39
SCN1A-216ENST00000637968 PAK2Q13177 524 aa6.36□□□□□ -1.39
SCN1A-216ENST00000637968 ALDH1L2Q3SY69 923 aa6.36□□□□□ -1.39
SCN1A-216ENST00000637968 UBE2Q1Q7Z7E8 422 aa6.36□□□□□ -1.39
SCN1A-216ENST00000637968 HELBQ8NG08 1087 aaPredicted RBP6.36□□□□□ -1.39
SCN1A-216ENST00000637968 GFM2Q969S9 779 aaKnown RBP6.36□□□□□ -1.39
SCN1A-216ENST00000637968 TRAPPC9Q96Q05 1148 aa6.36□□□□□ -1.39
SCN1A-216ENST00000637968 TMED5Q9Y3A6 229 aa6.36□□□□□ -1.39
SCN1A-216ENST00000637968 RPAP1Q9BWH6 1393 aaPredicted RBP6.36□□□□□ -1.39
SCN1A-216ENST00000637968 ANKRD50Q9ULJ7 1429 aa6.36□□□□□ -1.39
SCN1A-216ENST00000637968 PDLIM1O00151 329 aa6.36□□□□□ -1.39
SCN1A-216ENST00000637968 KCNA2P16389 499 aa6.36□□□□□ -1.39
SCN1A-216ENST00000637968 TMED10P49755 219 aaKnown RBP6.36□□□□□ -1.39
SCN1A-216ENST00000637968 SLC7A5Q01650 507 aa6.36□□□□□ -1.39
SCN1A-216ENST00000637968 CCDC110Q8TBZ0 833 aa6.36□□□□□ -1.39
SCN1A-216ENST00000637968 C8orf76Q96K31 380 aa6.36□□□□□ -1.39
SCN1A-216ENST00000637968 MAK16Q9BXY0 300 aaKnown RBP6.36□□□□□ -1.39
SCN1A-216ENST00000637968 ANKZF1Q9H8Y5 726 aa6.36□□□□□ -1.39
SCN1A-216ENST00000637968 INTUQ9ULD6 942 aa6.36□□□□□ -1.39
SCN1A-216ENST00000637968 FAF1Q9UNN5 650 aaPredicted RBP6.36□□□□□ -1.39
SCN1A-216ENST00000637968 ERBINQ96RT1 1412 aa6.36□□□□□ -1.39
SCN1A-216ENST00000637968 A0A1B0GVL5 298 aa6.36□□□□□ -1.39
SCN1A-216ENST00000637968 GMNCA6NCL1 334 aa6.36□□□□□ -1.39
SCN1A-216ENST00000637968 STK10O94804 968 aaKnown RBP6.36□□□□□ -1.39
SCN1A-216ENST00000637968 MATR3P43243 847 aaKnown RBP eCLIP6.36□□□□□ -1.391e-10■■■■■ 37.8
SCN1A-216ENST00000637968 AK2P54819 239 aa6.36□□□□□ -1.39
SCN1A-216ENST00000637968 MYBPC3Q14896 1274 aa6.36□□□□□ -1.39
SCN1A-216ENST00000637968 RUFY4Q6ZNE9 571 aa6.36□□□□□ -1.39
SCN1A-216ENST00000637968 Q6ZUG5 572 aa6.36□□□□□ -1.39
SCN1A-216ENST00000637968 ELOA2Q8IYF1 753 aaPredicted RBP6.36□□□□□ -1.39
SCN1A-216ENST00000637968 KLHL29Q96CT2 875 aa6.36□□□□□ -1.39
SCN1A-216ENST00000637968 GPR101Q96P66 508 aaPredicted RBP6.36□□□□□ -1.39
SCN1A-216ENST00000637968 JADE2Q9NQC1 790 aa6.36□□□□□ -1.39
SCN1A-216ENST00000637968 GMEB1Q9Y692 573 aa6.36□□□□□ -1.39
SCN1A-216ENST00000637968 TBCAO75347 108 aaKnown RBP6.35□□□□□ -1.39
SCN1A-216ENST00000637968 NPTXRO95502 500 aa6.35□□□□□ -1.39
SCN1A-216ENST00000637968 GUCY2FP51841 1108 aa6.35□□□□□ -1.39
SCN1A-216ENST00000637968 PDE1BQ01064 536 aa6.35□□□□□ -1.39
SCN1A-216ENST00000637968 CPLX3Q8WVH0 158 aa6.35□□□□□ -1.39
SCN1A-216ENST00000637968 DESI2Q9BSY9 194 aa6.35□□□□□ -1.39
SCN1A-216ENST00000637968 RASAL2Q9UJF2 1139 aa6.35□□□□□ -1.39
SCN1A-216ENST00000637968 HECW1Q76N89 1606 aa6.35□□□□□ -1.39
SCN1A-216ENST00000637968 AKR1B15C9JRZ8 316 aaPredicted RBP6.35□□□□□ -1.39
SCN1A-216ENST00000637968 CAPN15O75808 1086 aa6.35□□□□□ -1.39
SCN1A-216ENST00000637968 MAGEA10P43363 369 aaPredicted RBP6.35□□□□□ -1.39
SCN1A-216ENST00000637968 RHBDL3P58872 404 aa6.35□□□□□ -1.39
SCN1A-216ENST00000637968 MYL5Q02045 173 aa6.35□□□□□ -1.39
SCN1A-216ENST00000637968 WDR93Q6P2C0 686 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms