RNA–Protein interactions for RNA: ENST00000637903.1

SPTAN1-238, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5

Gene SPTAN1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-238	ENST00000637903		A0A0C4DFX4	3053 aa		10.07	□□□□□ -0.8
SPTAN1-238	ENST00000637903	DDX60L	Q5H9U9	1706 aa	Known RBP	10.07	□□□□□ -0.8
SPTAN1-238	ENST00000637903	HLA-DOA	P06340	250 aa		10.06	□□□□□ -0.8
SPTAN1-238	ENST00000637903	COL6A1	P12109	1028 aa		10.06	□□□□□ -0.8
SPTAN1-238	ENST00000637903	PRKAR2A	P13861	404 aa	Known RBP	10.06	□□□□□ -0.8
SPTAN1-238	ENST00000637903	CYP7A1	P22680	504 aa		10.06	□□□□□ -0.8
SPTAN1-238	ENST00000637903	CACNB2	Q08289	660 aa	Predicted RBP	10.06	□□□□□ -0.8
SPTAN1-238	ENST00000637903	OS9	Q13438	667 aa	Predicted RBP	10.06	□□□□□ -0.8
SPTAN1-238	ENST00000637903	HSP90AB4P	Q58FF6	505 aa		10.06	□□□□□ -0.8
SPTAN1-238	ENST00000637903	LHX8	Q68G74	356 aa		10.06	□□□□□ -0.8
SPTAN1-238	ENST00000637903	TMED8	Q6PL24	325 aa	Predicted RBP	10.06	□□□□□ -0.8
SPTAN1-238	ENST00000637903	GPR142	Q7Z601	462 aa		10.06	□□□□□ -0.8
SPTAN1-238	ENST00000637903	C7orf61	Q8IZ16	206 aa		10.06	□□□□□ -0.8
SPTAN1-238	ENST00000637903	EAF2	Q96CJ1	260 aa	Predicted RBP	10.06	□□□□□ -0.8
SPTAN1-238	ENST00000637903	LRCH3	Q96II8	777 aa		10.06	□□□□□ -0.8
SPTAN1-238	ENST00000637903	TRIM34	Q9BYJ4	488 aa		10.06	□□□□□ -0.8
SPTAN1-238	ENST00000637903	EHD4	Q9H223	541 aa		10.06	□□□□□ -0.8
SPTAN1-238	ENST00000637903	PORCN	Q9H237	461 aa		10.06	□□□□□ -0.8
SPTAN1-238	ENST00000637903	SAP30BP	Q9UHR5	308 aa	Known RBP	10.06	□□□□□ -0.8
SPTAN1-238	ENST00000637903	EXOC6B	Q9Y2D4	811 aa		10.06	□□□□□ -0.8
SPTAN1-238	ENST00000637903	PFAS	O15067	1338 aa		10.06	□□□□□ -0.8
SPTAN1-238	ENST00000637903	USP17L15	C9J2P7	530 aa		10.05	□□□□□ -0.8
SPTAN1-238	ENST00000637903	USP17L13	C9JLJ4	530 aa		10.05	□□□□□ -0.8
SPTAN1-238	ENST00000637903	USP17L11	C9JVI0	530 aa		10.05	□□□□□ -0.8
SPTAN1-238	ENST00000637903	USP17L18	D6R9N7	530 aa		10.05	□□□□□ -0.8
SPTAN1-238	ENST00000637903	USP17L22	D6RA61	530 aa		10.05	□□□□□ -0.8
SPTAN1-238	ENST00000637903	USP17L17	D6RBQ6	530 aa		10.05	□□□□□ -0.8
SPTAN1-238	ENST00000637903	USP17L19	D6RCP7	530 aa		10.05	□□□□□ -0.8
SPTAN1-238	ENST00000637903	USP17L20	D6RJB6	530 aa		10.05	□□□□□ -0.8
SPTAN1-238	ENST00000637903	RAB11FIP3	O75154	756 aa		10.05	□□□□□ -0.8
SPTAN1-238	ENST00000637903	CNMD	O75829	334 aa		10.05	□□□□□ -0.8
SPTAN1-238	ENST00000637903	GH2	P01242	217 aa		10.05	□□□□□ -0.8
SPTAN1-238	ENST00000637903	ZKSCAN1	P17029	563 aa	Predicted RBP	10.05	□□□□□ -0.8
SPTAN1-238	ENST00000637903	RGS2	P41220	211 aa		10.05	□□□□□ -0.8
SPTAN1-238	ENST00000637903	USP17L24	Q0WX57	530 aa		10.05	□□□□□ -0.8
SPTAN1-238	ENST00000637903	LRIT3	Q3SXY7	679 aa		10.05	□□□□□ -0.8
SPTAN1-238	ENST00000637903	LBX2	Q6XYB7	198 aa		10.05	□□□□□ -0.8
SPTAN1-238	ENST00000637903	CENPQ	Q7L2Z9	268 aa	Predicted RBP	10.05	□□□□□ -0.8
SPTAN1-238	ENST00000637903	PLEKHH3	Q7Z736	793 aa		10.05	□□□□□ -0.8
SPTAN1-238	ENST00000637903	ERC1	Q8IUD2	1116 aa		10.05	□□□□□ -0.8
SPTAN1-238	ENST00000637903	CCDC8	Q9H0W5	538 aa	Predicted RBP	10.05	□□□□□ -0.8
SPTAN1-238	ENST00000637903	TLR7	Q9NYK1	1049 aa	Known RBP	10.05	□□□□□ -0.8
SPTAN1-238	ENST00000637903	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	10.05	□□□□□ -0.8
SPTAN1-238	ENST00000637903	RABGAP1	Q9Y3P9	1069 aa		10.05	□□□□□ -0.8
SPTAN1-238	ENST00000637903	DNAH12	Q6ZR08	3092 aa		10.05	□□□□□ -0.8
SPTAN1-238	ENST00000637903	APBB1	O00213	710 aa		10.04	□□□□□ -0.8
SPTAN1-238	ENST00000637903	CCND3	P30281	292 aa	Predicted RBP	10.04	□□□□□ -0.8
SPTAN1-238	ENST00000637903	MAGEA10	P43363	369 aa	Predicted RBP	10.04	□□□□□ -0.8
SPTAN1-238	ENST00000637903	MAP2K5	Q13163	448 aa		10.04	□□□□□ -0.8
SPTAN1-238	ENST00000637903	CCL14	Q16627	93 aa		10.04	□□□□□ -0.8
SPTAN1-238	ENST00000637903	CATSPERG	Q6ZRH7	1159 aa		10.04	□□□□□ -0.8
SPTAN1-238	ENST00000637903	SMC5	Q8IY18	1101 aa		10.04	□□□□□ -0.8
SPTAN1-238	ENST00000637903	APBA2	Q99767	749 aa		10.04	□□□□□ -0.8
SPTAN1-238	ENST00000637903	PAGR1	Q9BTK6	254 aa		10.04	□□□□□ -0.8
SPTAN1-238	ENST00000637903	KIAA1683	Q9H0B3	1180 aa		10.04	□□□□□ -0.8
SPTAN1-238	ENST00000637903	SERPINB13	Q9UIV8	391 aa		10.04	□□□□□ -0.8
SPTAN1-238	ENST00000637903	IDH1	O75874	414 aa	Known RBP	10.03	□□□□□ -0.8
SPTAN1-238	ENST00000637903	IGHA2	P01877	340 aa		10.03	□□□□□ -0.8
SPTAN1-238	ENST00000637903	HOXC6	P09630	235 aa		10.03	□□□□□ -0.8
SPTAN1-238	ENST00000637903	SYN1	P17600	705 aa		10.03	□□□□□ -0.8
SPTAN1-238	ENST00000637903	USP5	P45974	858 aa		10.03	□□□□□ -0.8
SPTAN1-238	ENST00000637903	USP14	P54578	494 aa		10.03	□□□□□ -0.8
SPTAN1-238	ENST00000637903	MAP3K12	Q12852	859 aa		10.03	□□□□□ -0.8
SPTAN1-238	ENST00000637903	CERKL	Q49MI3	558 aa	Predicted RBP	10.03	□□□□□ -0.8
SPTAN1-238	ENST00000637903	TTC6	Q86TZ1	520 aa		10.03	□□□□□ -0.8
SPTAN1-238	ENST00000637903	CCAR1	Q8IX12	1150 aa	Known RBP	10.03	□□□□□ -0.8
SPTAN1-238	ENST00000637903	MAGEB6	Q8N7X4	407 aa		10.03	□□□□□ -0.8
SPTAN1-238	ENST00000637903	MIGA1	Q8NAN2	632 aa		10.03	□□□□□ -0.8
SPTAN1-238	ENST00000637903	SLC17A8	Q8NDX2	589 aa		10.03	□□□□□ -0.8
SPTAN1-238	ENST00000637903	RHPN1	Q8TCX5	695 aa		10.03	□□□□□ -0.8
SPTAN1-238	ENST00000637903	KIF1BP	Q96EK5	621 aa		10.03	□□□□□ -0.8
SPTAN1-238	ENST00000637903	EDC3	Q96F86	508 aa	Known RBP	10.03	□□□□□ -0.8
SPTAN1-238	ENST00000637903	LRRCC1	Q9C099	1032 aa		10.03	□□□□□ -0.8
SPTAN1-238	ENST00000637903	SLC15A5	A6NIM6	579 aa		10.02	□□□□□ -0.81
SPTAN1-238	ENST00000637903	GLRX3	O76003	335 aa	Known RBP	10.02	□□□□□ -0.81
SPTAN1-238	ENST00000637903	VCAM1	P19320	739 aa		10.02	□□□□□ -0.81
SPTAN1-238	ENST00000637903	PTPRE	P23469	700 aa		10.02	□□□□□ -0.81
SPTAN1-238	ENST00000637903	GUCY1A2	P33402	732 aa		10.02	□□□□□ -0.81
SPTAN1-238	ENST00000637903	SHMT1	P34896	483 aa		10.02	□□□□□ -0.81
SPTAN1-238	ENST00000637903	PLCD1	P51178	756 aa		10.02	□□□□□ -0.81
SPTAN1-238	ENST00000637903	CCNA1	P78396	465 aa		10.02	□□□□□ -0.81
SPTAN1-238	ENST00000637903	GABPA	Q06546	454 aa		10.02	□□□□□ -0.81
SPTAN1-238	ENST00000637903	RAB3GAP1	Q15042	981 aa		10.02	□□□□□ -0.81
SPTAN1-238	ENST00000637903	LRRC26	Q2I0M4	334 aa		10.02	□□□□□ -0.81
SPTAN1-238	ENST00000637903	ABCB5	Q2M3G0	1257 aa		10.02	□□□□□ -0.81
SPTAN1-238	ENST00000637903	ANKRD45	Q5TZF3	282 aa		10.02	□□□□□ -0.81
SPTAN1-238	ENST00000637903	TDH	Q8IZJ6	230 aa		10.02	□□□□□ -0.81
SPTAN1-238	ENST00000637903	ACER1	Q8TDN7	264 aa		10.02	□□□□□ -0.81
SPTAN1-238	ENST00000637903	RIOK1	Q9BRS2	568 aa	Known RBP	10.02	□□□□□ -0.81
SPTAN1-238	ENST00000637903	ANTXR1	Q9H6X2	564 aa		10.02	□□□□□ -0.81
SPTAN1-238	ENST00000637903	FLRT1	Q9NZU1	646 aa		10.02	□□□□□ -0.81
SPTAN1-238	ENST00000637903	BTBD7	Q9P203	1132 aa		10.02	□□□□□ -0.81
SPTAN1-238	ENST00000637903	ZBTB47	Q9UFB7	747 aa	Predicted RBP	10.02	□□□□□ -0.81
SPTAN1-238	ENST00000637903	NDUFB9	Q9Y6M9	179 aa		10.02	□□□□□ -0.81
SPTAN1-238	ENST00000637903	FRMPD3	Q5JV73	1810 aa		10.02	□□□□□ -0.81
SPTAN1-238	ENST00000637903	CUL9	Q8IWT3	2517 aa		10.01	□□□□□ -0.81
SPTAN1-238	ENST00000637903	SMARCA5	O60264	1052 aa	Predicted RBP	10.01	□□□□□ -0.81
SPTAN1-238	ENST00000637903	NUCB1	Q02818	461 aa		10.01	□□□□□ -0.81
SPTAN1-238	ENST00000637903	GRB14	Q14449	540 aa		10.01	□□□□□ -0.81
SPTAN1-238	ENST00000637903	ZYX	Q15942	572 aa	Known RBP	10.01	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms