RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 SYNPO2Q9UMS6 1093 aa15.68■□□□□ 0.1
LINC00643-207ENST00000637212 DDX60LQ5H9U9 1706 aaKnown RBP15.68■□□□□ 0.1
LINC00643-207ENST00000637212 LAMA4Q16363 1823 aa15.67■□□□□ 0.1
LINC00643-207ENST00000637212 FOCADQ5VW36 1801 aa15.67■□□□□ 0.1
LINC00643-207ENST00000637212 ZBTB43O43298 467 aa15.67■□□□□ 0.1
LINC00643-207ENST00000637212 TTLL1O95922 423 aa15.67■□□□□ 0.1
LINC00643-207ENST00000637212 SLURP2P0DP57 97 aa15.67■□□□□ 0.1
LINC00643-207ENST00000637212 NF2P35240 595 aa15.67■□□□□ 0.1
LINC00643-207ENST00000637212 RRP1BQ14684 758 aaKnown RBP15.67■□□□□ 0.1
LINC00643-207ENST00000637212 PRAMEF18Q5VWM3 479 aa15.67■□□□□ 0.1
LINC00643-207ENST00000637212 APOA5Q6Q788 366 aa15.67■□□□□ 0.1
LINC00643-207ENST00000637212 NOL8Q76FK4 1167 aaKnown RBP15.67■□□□□ 0.1
LINC00643-207ENST00000637212 CEP95Q96GE4 821 aa15.67■□□□□ 0.1
LINC00643-207ENST00000637212 KAT14Q9H8E8 782 aa15.67■□□□□ 0.1
LINC00643-207ENST00000637212 SENP2Q9HC62 589 aa15.67■□□□□ 0.1
LINC00643-207ENST00000637212 NAV1Q8NEY1 1877 aa15.66■□□□□ 0.1
LINC00643-207ENST00000637212 CCDC196A0A1B0GTZ2 297 aa15.66■□□□□ 0.1
LINC00643-207ENST00000637212 ADM5C9JUS6 153 aa15.66■□□□□ 0.1
LINC00643-207ENST00000637212 PPP1R12BO60237 982 aaPredicted RBP15.66■□□□□ 0.1
LINC00643-207ENST00000637212 DDAH1O94760 285 aa15.66■□□□□ 0.1
LINC00643-207ENST00000637212 GH2P01242 217 aa15.66■□□□□ 0.1
LINC00643-207ENST00000637212 ASNSP08243 561 aa15.66■□□□□ 0.1
LINC00643-207ENST00000637212 GUCY1A2P33402 732 aa15.66■□□□□ 0.1
LINC00643-207ENST00000637212 TMEM47Q9BQJ4 181 aa15.66■□□□□ 0.1
LINC00643-207ENST00000637212 LLPHQ9BRT6 129 aaKnown RBP15.66■□□□□ 0.1
LINC00643-207ENST00000637212 GPBP1L1Q9HC44 474 aaPredicted RBP15.66■□□□□ 0.1
LINC00643-207ENST00000637212 CWC22Q9HCG8 908 aaKnown RBP15.66■□□□□ 0.1
LINC00643-207ENST00000637212 CLIP2Q9UDT6 1046 aa15.66■□□□□ 0.1
LINC00643-207ENST00000637212 STX8Q9UNK0 236 aa15.66■□□□□ 0.1
LINC00643-207ENST00000637212 HPS5Q9UPZ3 1129 aa15.66■□□□□ 0.1
LINC00643-207ENST00000637212 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.66■□□□□ 0.1
LINC00643-207ENST00000637212 BAZ2AQ9UIF9 1905 aaKnown RBP15.66■□□□□ 0.1
LINC00643-207ENST00000637212 USP2O75604 605 aaPredicted RBP15.65■□□□□ 0.1
LINC00643-207ENST00000637212 HSP90AA1P07900 732 aaKnown RBP15.65■□□□□ 0.1
LINC00643-207ENST00000637212 SLC4A3P48751 1232 aa15.65■□□□□ 0.1
LINC00643-207ENST00000637212 TROAPQ12815 778 aa15.65■□□□□ 0.1
LINC00643-207ENST00000637212 SEPT2Q15019 361 aa15.65■□□□□ 0.1
LINC00643-207ENST00000637212 SIAH1Q8IUQ4 282 aa15.65■□□□□ 0.1
LINC00643-207ENST00000637212 ZNF654Q8IZM8 581 aa15.65■□□□□ 0.1
LINC00643-207ENST00000637212 FANCBQ8NB91 859 aa15.65■□□□□ 0.1
LINC00643-207ENST00000637212 GTF3C6Q969F1 213 aa15.65■□□□□ 0.1
LINC00643-207ENST00000637212 KLRG1Q96E93 195 aa15.65■□□□□ 0.1
LINC00643-207ENST00000637212 CDCA5Q96FF9 252 aa15.65■□□□□ 0.1
LINC00643-207ENST00000637212 NMRK2Q9NPI5 230 aa15.65■□□□□ 0.1
LINC00643-207ENST00000637212 ECM29Q5VYK3 1845 aa15.65■□□□□ 0.1
LINC00643-207ENST00000637212 SCN4AP35499 1836 aa15.64■□□□□ 0.09
LINC00643-207ENST00000637212 UNCXA6NJT0 531 aa15.64■□□□□ 0.09
LINC00643-207ENST00000637212 GOLGA8BA8MQT2 603 aa15.64■□□□□ 0.09
LINC00643-207ENST00000637212 GDF11O95390 407 aa15.64■□□□□ 0.09
LINC00643-207ENST00000637212 LARGE1O95461 756 aa15.64■□□□□ 0.09
LINC00643-207ENST00000637212 METAP2P50579 478 aaKnown RBP eCLIP15.64■□□□□ 0.09
LINC00643-207ENST00000637212 JAG1P78504 1218 aa15.64■□□□□ 0.09
LINC00643-207ENST00000637212 MAP3K9P80192 1104 aa15.64■□□□□ 0.09
LINC00643-207ENST00000637212 SCRN1Q12765 414 aa15.64■□□□□ 0.09
LINC00643-207ENST00000637212 NOL9Q5SY16 702 aaKnown RBP15.64■□□□□ 0.09
LINC00643-207ENST00000637212 NECAB1Q8N987 351 aa15.64■□□□□ 0.09
LINC00643-207ENST00000637212 PNMA1Q8ND90 353 aa15.64■□□□□ 0.09
LINC00643-207ENST00000637212 CDK5RAP2Q96SN8 1893 aa15.64■□□□□ 0.09
LINC00643-207ENST00000637212 GLIS2Q9BZE0 524 aaPredicted RBP15.64■□□□□ 0.09
LINC00643-207ENST00000637212 ZBTB21Q9ULJ3 1066 aa15.64■□□□□ 0.09
LINC00643-207ENST00000637212 NAP1L2Q9ULW6 460 aaPredicted RBP15.64■□□□□ 0.09
LINC00643-207ENST00000637212 MYH1P12882 1939 aa15.64■□□□□ 0.09
LINC00643-207ENST00000637212 NID2Q14112 1375 aa15.63■□□□□ 0.09
LINC00643-207ENST00000637212 EEF2P13639 858 aaKnown RBP15.63■□□□□ 0.09
LINC00643-207ENST00000637212 KIF5BP33176 963 aa15.63■□□□□ 0.09
LINC00643-207ENST00000637212 ICA1Q05084 483 aa15.63■□□□□ 0.09
LINC00643-207ENST00000637212 STK3Q13188 491 aa15.63■□□□□ 0.09
LINC00643-207ENST00000637212 RAB3GAP1Q15042 981 aa15.63■□□□□ 0.09
LINC00643-207ENST00000637212 MAP3K11Q16584 847 aa15.63■□□□□ 0.09
LINC00643-207ENST00000637212 CPLX2Q6PUV4 134 aaKnown RBP15.63■□□□□ 0.09
LINC00643-207ENST00000637212 CCDC83Q8IWF9 413 aa15.63■□□□□ 0.09
LINC00643-207ENST00000637212 SCYL3Q8IZE3 742 aa15.63■□□□□ 0.09
LINC00643-207ENST00000637212 ZNF526Q8TF50 670 aaPredicted RBP15.63■□□□□ 0.09
LINC00643-207ENST00000637212 RBM28Q9NW13 759 aaKnown RBP15.63■□□□□ 0.09
LINC00643-207ENST00000637212 LAMB1P07942 1786 aa15.62■□□□□ 0.09
LINC00643-207ENST00000637212 GOLGA8AA7E2F4 631 aa15.62■□□□□ 0.09
LINC00643-207ENST00000637212 USP17L5A8MUK1 530 aa15.62■□□□□ 0.09
LINC00643-207ENST00000637212 CDKL5O76039 1030 aa15.62■□□□□ 0.09
LINC00643-207ENST00000637212 IREB2P48200 963 aaKnown RBP15.62■□□□□ 0.09
LINC00643-207ENST00000637212 GNAQP50148 359 aa15.62■□□□□ 0.09
LINC00643-207ENST00000637212 CCT2P78371 535 aaKnown RBP15.62■□□□□ 0.09
LINC00643-207ENST00000637212 RTN1Q16799 776 aa15.62■□□□□ 0.09
LINC00643-207ENST00000637212 MAP1SQ66K74 1059 aaPredicted RBP15.62■□□□□ 0.09
LINC00643-207ENST00000637212 ARMC9Q7Z3E5 817 aa15.62■□□□□ 0.09
LINC00643-207ENST00000637212 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.62■□□□□ 0.09
LINC00643-207ENST00000637212 NUP133Q8WUM0 1156 aa15.62■□□□□ 0.09
LINC00643-207ENST00000637212 WRNIP1Q96S55 665 aa15.62■□□□□ 0.09
LINC00643-207ENST00000637212 LZTS2Q9BRK4 669 aa15.62■□□□□ 0.09
LINC00643-207ENST00000637212 SH2D4AQ9H788 454 aa15.62■□□□□ 0.09
LINC00643-207ENST00000637212 ARHGEF10LQ9HCE6 1279 aa15.62■□□□□ 0.09
LINC00643-207ENST00000637212 PICK1Q9NRD5 415 aa15.62■□□□□ 0.09
LINC00643-207ENST00000637212 FAM217BQ9NTX9 383 aaPredicted RBP15.62■□□□□ 0.09
LINC00643-207ENST00000637212 TMX2Q9Y320 296 aa15.62■□□□□ 0.09
LINC00643-207ENST00000637212 CPLX1O14810 134 aa15.61■□□□□ 0.09
LINC00643-207ENST00000637212 POTEIP0CG38 1075 aa15.61■□□□□ 0.09
LINC00643-207ENST00000637212 POTEJP0CG39 1038 aa15.61■□□□□ 0.09
LINC00643-207ENST00000637212 PDIA4P13667 645 aaKnown RBP15.61■□□□□ 0.09
LINC00643-207ENST00000637212 SMARCA1P28370 1054 aa15.61■□□□□ 0.09
LINC00643-207ENST00000637212 FKBP1BP68106 108 aa15.61■□□□□ 0.09
LINC00643-207ENST00000637212 ST3GAL1Q11201 340 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms