RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-231	ENST00000636816	RBM5	P52756	815 aa	Known RBP eCLIP	18.38	■□□□□ 0.53
CACNA1A-231	ENST00000636816	LINC00301	Q8NCQ3	95 aa		18.38	■□□□□ 0.53
CACNA1A-231	ENST00000636816	TMEM47	Q9BQJ4	181 aa		18.38	■□□□□ 0.53
CACNA1A-231	ENST00000636816	ZNF277	Q9NRM2	450 aa	Predicted RBP	18.38	■□□□□ 0.53
CACNA1A-231	ENST00000636816	DACT1	Q9NYF0	836 aa		18.38	■□□□□ 0.53
CACNA1A-231	ENST00000636816	MTMR7	Q9Y216	660 aa		18.38	■□□□□ 0.53
CACNA1A-231	ENST00000636816	NR1I2	O75469	434 aa		18.37	■□□□□ 0.53
CACNA1A-231	ENST00000636816	GABPA	Q06546	454 aa		18.37	■□□□□ 0.53
CACNA1A-231	ENST00000636816	GNL2	Q13823	731 aa	Known RBP	18.37	■□□□□ 0.53
CACNA1A-231	ENST00000636816	CCDC125	Q86Z20	511 aa		18.37	■□□□□ 0.53
CACNA1A-231	ENST00000636816	STAG2	Q8N3U4	1231 aa		18.37	■□□□□ 0.53
CACNA1A-231	ENST00000636816	NEDD1	Q8NHV4	660 aa		18.37	■□□□□ 0.53
CACNA1A-231	ENST00000636816	BICD2	Q8TD16	824 aa		18.37	■□□□□ 0.53
CACNA1A-231	ENST00000636816	PIBF1	Q8WXW3	757 aa		18.37	■□□□□ 0.53
CACNA1A-231	ENST00000636816	ZNF287	Q9HBT7	754 aa		18.37	■□□□□ 0.53
CACNA1A-231	ENST00000636816	STX8	Q9UNK0	236 aa		18.37	■□□□□ 0.53
CACNA1A-231	ENST00000636816	CNTNAP5	Q8WYK1	1306 aa		18.37	■□□□□ 0.53
CACNA1A-231	ENST00000636816	COL4A5	P29400	1685 aa		18.37	■□□□□ 0.53
CACNA1A-231	ENST00000636816	VEGFA	P15692	232 aa	Predicted RBP	18.37	■□□□□ 0.53
CACNA1A-231	ENST00000636816	AKAP17A	Q02040	695 aa	Known RBP	18.37	■□□□□ 0.53
CACNA1A-231	ENST00000636816	CAMK4	Q16566	473 aa		18.37	■□□□□ 0.53
CACNA1A-231	ENST00000636816	RTKN2	Q8IZC4	609 aa		18.37	■□□□□ 0.53
CACNA1A-231	ENST00000636816	OXER1	Q8TDS5	423 aa		18.37	■□□□□ 0.53
CACNA1A-231	ENST00000636816	MRI	Q9BWK5	157 aa		18.37	■□□□□ 0.53
CACNA1A-231	ENST00000636816	OSBPL5	Q9H0X9	879 aa	Predicted RBP	18.37	■□□□□ 0.53
CACNA1A-231	ENST00000636816	VPS54	Q9P1Q0	977 aa		18.37	■□□□□ 0.53
CACNA1A-231	ENST00000636816	PCDHA7	Q9UN72	937 aa		18.37	■□□□□ 0.53
CACNA1A-231	ENST00000636816	ME1	P48163	572 aa		18.36	■□□□□ 0.53
CACNA1A-231	ENST00000636816	TCP10	Q12799	353 aa		18.36	■□□□□ 0.53
CACNA1A-231	ENST00000636816	RASGRP2	Q7LDG7	609 aa		18.36	■□□□□ 0.53
CACNA1A-231	ENST00000636816	DIS3L2	Q8IYB7	885 aa	Known RBP	18.36	■□□□□ 0.53
CACNA1A-231	ENST00000636816	GOLPH3L	Q9H4A5	285 aa		18.36	■□□□□ 0.53
CACNA1A-231	ENST00000636816	POLR3E	Q9NVU0	708 aa		18.36	■□□□□ 0.53
CACNA1A-231	ENST00000636816	NT5C2	P49902	561 aa		18.35	■□□□□ 0.53
CACNA1A-231	ENST00000636816	NR5A1	Q13285	461 aa		18.35	■□□□□ 0.53
CACNA1A-231	ENST00000636816	STK38	Q15208	465 aa		18.35	■□□□□ 0.53
CACNA1A-231	ENST00000636816	ANO1	Q5XXA6	986 aa		18.35	■□□□□ 0.53
CACNA1A-231	ENST00000636816	CCAR1	Q8IX12	1150 aa	Known RBP	18.35	■□□□□ 0.53
CACNA1A-231	ENST00000636816	CEP95	Q96GE4	821 aa		18.35	■□□□□ 0.53
CACNA1A-231	ENST00000636816	RAD17	O75943	681 aa		18.35	■□□□□ 0.53
CACNA1A-231	ENST00000636816	NASP	P49321	788 aa	Predicted RBP	18.35	■□□□□ 0.53
CACNA1A-231	ENST00000636816	HDLBP	Q00341	1268 aa	Known RBP	18.35	■□□□□ 0.53
CACNA1A-231	ENST00000636816	CCDC178	Q5BJE1	867 aa		18.35	■□□□□ 0.53
CACNA1A-231	ENST00000636816	PSMD1	Q99460	953 aa		18.35	■□□□□ 0.53
CACNA1A-231	ENST00000636816	TSPY26P	Q9H489	355 aa		18.35	■□□□□ 0.53
CACNA1A-231	ENST00000636816	MAD2L2	Q9UI95	211 aa		18.35	■□□□□ 0.53
CACNA1A-231	ENST00000636816	MYH8	P13535	1937 aa		18.34	■□□□□ 0.53
CACNA1A-231	ENST00000636816	AKR1B1	P15121	316 aa		18.34	■□□□□ 0.53
CACNA1A-231	ENST00000636816	R3HDM1	Q15032	1099 aa	Known RBP	18.34	■□□□□ 0.53
CACNA1A-231	ENST00000636816	SF3A1	Q15459	793 aa	Known RBP	18.34	■□□□□ 0.53
CACNA1A-231	ENST00000636816	SLC35G1	Q2M3R5	365 aa		18.34	■□□□□ 0.53
CACNA1A-231	ENST00000636816	LARGE2	Q8N3Y3	721 aa		18.34	■□□□□ 0.53
CACNA1A-231	ENST00000636816	FAM198A	Q9UFP1	575 aa		18.34	■□□□□ 0.53
CACNA1A-231	ENST00000636816	SPTLC2	O15270	562 aa		18.33	■□□□□ 0.53
CACNA1A-231	ENST00000636816	GRM4	Q14833	912 aa		18.33	■□□□□ 0.53
CACNA1A-231	ENST00000636816	NOSTRIN	Q8IVI9	506 aa		18.33	■□□□□ 0.53
CACNA1A-231	ENST00000636816	RNF214	Q8ND24	703 aa		18.33	■□□□□ 0.53
CACNA1A-231	ENST00000636816	TDRD3	Q9H7E2	651 aa	Known RBP	18.33	■□□□□ 0.53
CACNA1A-231	ENST00000636816	PIM2	Q9P1W9	311 aa		18.33	■□□□□ 0.53
CACNA1A-231	ENST00000636816	SERPINB13	Q9UIV8	391 aa		18.33	■□□□□ 0.53
CACNA1A-231	ENST00000636816	SERPINA10	Q9UK55	444 aa		18.33	■□□□□ 0.53
CACNA1A-231	ENST00000636816	PSME4	Q14997	1843 aa		18.33	■□□□□ 0.52
CACNA1A-231	ENST00000636816	LETM1	O95202	739 aa	Predicted RBP	18.33	■□□□□ 0.52
CACNA1A-231	ENST00000636816	YEATS4	O95619	227 aa		18.33	■□□□□ 0.52
CACNA1A-231	ENST00000636816	GOLGA8H	P0CJ92	632 aa		18.33	■□□□□ 0.52
CACNA1A-231	ENST00000636816	KIF5B	P33176	963 aa		18.33	■□□□□ 0.52
CACNA1A-231	ENST00000636816	TOB1	P50616	345 aa	Predicted RBP	18.33	■□□□□ 0.52
CACNA1A-231	ENST00000636816	SAFB	Q15424	915 aa	Known RBP eCLIP	18.33	■□□□□ 0.52
CACNA1A-231	ENST00000636816	GRIPAP1	Q4V328	841 aa		18.33	■□□□□ 0.52
CACNA1A-231	ENST00000636816	CLEC10A	Q8IUN9	316 aa		18.33	■□□□□ 0.52
CACNA1A-231	ENST00000636816	PRMT6	Q96LA8	375 aa	Predicted RBP	18.33	■□□□□ 0.52
CACNA1A-231	ENST00000636816	MAP3K14	Q99558	947 aa		18.33	■□□□□ 0.52
CACNA1A-231	ENST00000636816	NUP62CL	Q9H1M0	184 aa		18.33	■□□□□ 0.52
CACNA1A-231	ENST00000636816	PPP1R1B	Q9UD71	204 aa	Predicted RBP	18.33	■□□□□ 0.52
CACNA1A-231	ENST00000636816	DDTL	A6NHG4	134 aa	Predicted RBP	18.32	■□□□□ 0.52
CACNA1A-231	ENST00000636816	MARCKS	P29966	332 aa	Predicted RBP	18.32	■□□□□ 0.52
CACNA1A-231	ENST00000636816	SHMT1	P34896	483 aa		18.32	■□□□□ 0.52
CACNA1A-231	ENST00000636816	CFAP100	Q494V2	611 aa		18.32	■□□□□ 0.52
CACNA1A-231	ENST00000636816	SH3BP5L	Q7L8J4	393 aa		18.32	■□□□□ 0.52
CACNA1A-231	ENST00000636816	PHF20	Q9BVI0	1012 aa		18.32	■□□□□ 0.52
CACNA1A-231	ENST00000636816	MTFR1L	Q9H019	292 aa		18.32	■□□□□ 0.52
CACNA1A-231	ENST00000636816	SIPA1L1	O43166	1804 aa		18.32	■□□□□ 0.52
CACNA1A-231	ENST00000636816	FAM196B	A6NMK8	535 aa		18.31	■□□□□ 0.52
CACNA1A-231	ENST00000636816	PSMD14	O00487	310 aa		18.31	■□□□□ 0.52
CACNA1A-231	ENST00000636816	TGFB2	P61812	414 aa		18.31	■□□□□ 0.52
CACNA1A-231	ENST00000636816	SLC39A14	Q15043	492 aa		18.31	■□□□□ 0.52
CACNA1A-231	ENST00000636816	PTPA	Q15257	358 aa		18.31	■□□□□ 0.52
CACNA1A-231	ENST00000636816	FUCA2	Q9BTY2	467 aa		18.31	■□□□□ 0.52
CACNA1A-231	ENST00000636816	FOXP1	Q9H334	677 aa	Predicted RBP	18.31	■□□□□ 0.52
CACNA1A-231	ENST00000636816	CPVL	Q9H3G5	476 aa		18.31	■□□□□ 0.52
CACNA1A-231	ENST00000636816	ZBTB12	Q9Y330	459 aa	Predicted RBP	18.31	■□□□□ 0.52
CACNA1A-231	ENST00000636816	FAM205C	A6NFA0	338 aa		18.31	■□□□□ 0.52
CACNA1A-231	ENST00000636816	ADAMTS3	O15072	1205 aa		18.31	■□□□□ 0.52
CACNA1A-231	ENST00000636816	CYTH3	O43739	400 aa		18.31	■□□□□ 0.52
CACNA1A-231	ENST00000636816	POLD1	P28340	1107 aa		18.31	■□□□□ 0.52
CACNA1A-231	ENST00000636816	NOV	P48745	357 aa		18.31	■□□□□ 0.52
CACNA1A-231	ENST00000636816	EIF6	P56537	245 aa	Known RBP	18.31	■□□□□ 0.52
CACNA1A-231	ENST00000636816	SNW1	Q13573	536 aa	Known RBP	18.31	■□□□□ 0.52
CACNA1A-231	ENST00000636816	EARS2	Q5JPH6	523 aa	Known RBP	18.31	■□□□□ 0.52
CACNA1A-231	ENST00000636816	ADAL	Q6DHV7	355 aa		18.31	■□□□□ 0.52

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms