RNA–Protein interactions for RNA: ENST00000636705.1

CLN5-214, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-214ENST00000636705 DMRTB1Q96MA1 342 aa4.82□□□□□ -1.64
CLN5-214ENST00000636705 USB1Q9BQ65 265 aaKnown RBP4.82□□□□□ -1.64
CLN5-214ENST00000636705 RTFDC1Q9BY42 306 aaPredicted RBP4.82□□□□□ -1.64
CLN5-214ENST00000636705 HDAC9Q9UKV0 1011 aa4.82□□□□□ -1.64
CLN5-214ENST00000636705 HMGB1P1B2RPK0 211 aaPredicted RBP4.82□□□□□ -1.64
CLN5-214ENST00000636705 CCER2I3L3R5 266 aa4.82□□□□□ -1.64
CLN5-214ENST00000636705 KLF4O43474 513 aa4.82□□□□□ -1.64
CLN5-214ENST00000636705 F12P00748 615 aaPredicted RBP4.82□□□□□ -1.64
CLN5-214ENST00000636705 HMOX1P09601 288 aa4.82□□□□□ -1.64
CLN5-214ENST00000636705 POU3F3P20264 500 aaPredicted RBP4.82□□□□□ -1.64
CLN5-214ENST00000636705 GGCXP38435 758 aa4.82□□□□□ -1.64
CLN5-214ENST00000636705 TAF7Q15545 349 aaPredicted RBP4.82□□□□□ -1.64
CLN5-214ENST00000636705 BRDTQ58F21 947 aaPredicted RBP4.82□□□□□ -1.64
CLN5-214ENST00000636705 CST9Q5W186 159 aa4.82□□□□□ -1.64
CLN5-214ENST00000636705 DPP8Q6V1X1 898 aaPredicted RBP4.82□□□□□ -1.64
CLN5-214ENST00000636705 ARPC5LQ9BPX5 153 aa4.82□□□□□ -1.64
CLN5-214ENST00000636705 HOMER2Q9NSB8 354 aa4.82□□□□□ -1.64
CLN5-214ENST00000636705 BSDC1Q9NW68 430 aaPredicted RBP4.82□□□□□ -1.64
CLN5-214ENST00000636705 ATP6V0A2Q9Y487 856 aa4.82□□□□□ -1.64
CLN5-214ENST00000636705 COMMD10Q9Y6G5 202 aa4.82□□□□□ -1.64
CLN5-214ENST00000636705 AK5Q9Y6K8 562 aa4.82□□□□□ -1.64
CLN5-214ENST00000636705 SBF1O95248 1867 aa4.82□□□□□ -1.64
CLN5-214ENST00000636705 NPC1L1Q9UHC9 1359 aa4.81□□□□□ -1.64
CLN5-214ENST00000636705 ZBTB39O15060 712 aa4.81□□□□□ -1.64
CLN5-214ENST00000636705 ALDH1A1P00352 501 aa4.81□□□□□ -1.64
CLN5-214ENST00000636705 EPS15P42566 896 aa4.81□□□□□ -1.64
CLN5-214ENST00000636705 SCNN1DP51172 638 aa4.81□□□□□ -1.64
CLN5-214ENST00000636705 HUNKP57058 714 aa4.81□□□□□ -1.64
CLN5-214ENST00000636705 SLC10A5Q5PT55 438 aa4.81□□□□□ -1.64
CLN5-214ENST00000636705 TTC39BQ5VTQ0 682 aaPredicted RBP4.81□□□□□ -1.64
CLN5-214ENST00000636705 DESI1Q6ICB0 168 aa4.81□□□□□ -1.64
CLN5-214ENST00000636705 DDX46Q7L014 1031 aaKnown RBP4.81□□□□□ -1.64
CLN5-214ENST00000636705 MPNDQ8N594 471 aa4.81□□□□□ -1.64
CLN5-214ENST00000636705 IL17REQ8NFR9 667 aa4.81□□□□□ -1.64
CLN5-214ENST00000636705 ALKBH8Q96BT7 664 aaKnown RBP4.81□□□□□ -1.64
CLN5-214ENST00000636705 SCYL1Q96KG9 808 aa4.81□□□□□ -1.64
CLN5-214ENST00000636705 GBA2Q9HCG7 927 aaPredicted RBP4.81□□□□□ -1.64
CLN5-214ENST00000636705 MAP3K20Q9NYL2 800 aaKnown RBP4.81□□□□□ -1.64
CLN5-214ENST00000636705 FBXO9Q9UK97 447 aaPredicted RBP4.81□□□□□ -1.64
CLN5-214ENST00000636705 DOLKQ9UPQ8 538 aa4.81□□□□□ -1.64
CLN5-214ENST00000636705 DLEC1Q9Y238 1755 aa4.81□□□□□ -1.64
CLN5-214ENST00000636705 CEMIPQ8WUJ3 1361 aa4.81□□□□□ -1.64
CLN5-214ENST00000636705 NF2P35240 595 aa4.81□□□□□ -1.64
CLN5-214ENST00000636705 INHBEP58166 350 aa4.81□□□□□ -1.64
CLN5-214ENST00000636705 KIAA2012Q0VF49 1180 aa4.81□□□□□ -1.64
CLN5-214ENST00000636705 AAMPQ13685 434 aa4.81□□□□□ -1.64
CLN5-214ENST00000636705 EMID1Q96A84 441 aaPredicted RBP4.81□□□□□ -1.64
CLN5-214ENST00000636705 APBA2Q99767 749 aa4.81□□□□□ -1.64
CLN5-214ENST00000636705 BABAM1Q9NWV8 329 aa4.81□□□□□ -1.64
CLN5-214ENST00000636705 TIAM2Q8IVF5 1701 aa4.8□□□□□ -1.64
CLN5-214ENST00000636705 MAP3K15Q6ZN16 1313 aa4.8□□□□□ -1.64
CLN5-214ENST00000636705 SSBP05455 408 aaKnown RBP eCLIP4.8□□□□□ -1.64
CLN5-214ENST00000636705 CAPN2P17655 700 aa4.8□□□□□ -1.64
CLN5-214ENST00000636705 ZNF157P51786 506 aaPredicted RBP4.8□□□□□ -1.64
CLN5-214ENST00000636705 SREBF2Q12772 1141 aa4.8□□□□□ -1.64
CLN5-214ENST00000636705 SQSTM1Q13501 440 aa4.8□□□□□ -1.64
CLN5-214ENST00000636705 RAB33AQ14088 237 aa4.8□□□□□ -1.64
CLN5-214ENST00000636705 RNF19BQ6ZMZ0 732 aa4.8□□□□□ -1.64
CLN5-214ENST00000636705 CITED4Q96RK1 184 aa4.8□□□□□ -1.64
CLN5-214ENST00000636705 DNAJC7Q99615 494 aa4.8□□□□□ -1.64
CLN5-214ENST00000636705 UTP14AQ9BVJ6 771 aaKnown RBP4.8□□□□□ -1.64
CLN5-214ENST00000636705 SLC6A16Q9GZN6 736 aa4.8□□□□□ -1.64
CLN5-214ENST00000636705 SLKQ9H2G2 1235 aaPredicted RBP4.8□□□□□ -1.64
CLN5-214ENST00000636705 NRBP1Q9UHY1 535 aa4.8□□□□□ -1.64
CLN5-214ENST00000636705 CNOT7Q9UIV1 285 aaKnown RBP4.8□□□□□ -1.64
CLN5-214ENST00000636705 USP16Q9Y5T5 823 aa4.8□□□□□ -1.64
CLN5-214ENST00000636705 TJP1Q07157 1748 aa4.8□□□□□ -1.64
CLN5-214ENST00000636705 ESPNB1AK53 854 aa4.8□□□□□ -1.64
CLN5-214ENST00000636705 MMP16P51512 607 aa4.8□□□□□ -1.64
CLN5-214ENST00000636705 CXCL9Q07325 125 aa4.8□□□□□ -1.64
CLN5-214ENST00000636705 ORC1Q13415 861 aa4.8□□□□□ -1.64
CLN5-214ENST00000636705 NFE2Q16621 373 aaPredicted RBP4.8□□□□□ -1.64
CLN5-214ENST00000636705 C10orf62Q5T681 223 aaPredicted RBP4.8□□□□□ -1.64
CLN5-214ENST00000636705 CCSAPQ6IQ19 270 aaPredicted RBP4.8□□□□□ -1.64
CLN5-214ENST00000636705 FAM160A2Q8N612 972 aaPredicted RBP4.8□□□□□ -1.64
CLN5-214ENST00000636705 APPBP2Q92624 585 aa4.8□□□□□ -1.64
CLN5-214ENST00000636705 GEMIN8Q9NWZ8 242 aaKnown RBP4.8□□□□□ -1.64
CLN5-214ENST00000636705 SIRPGQ9P1W8 387 aa4.8□□□□□ -1.64
CLN5-214ENST00000636705 LEMD3Q9Y2U8 911 aa4.8□□□□□ -1.64
CLN5-214ENST00000636705 RBM19Q9Y4C8 960 aaKnown RBP4.8□□□□□ -1.64
CLN5-214ENST00000636705 OPLAHO14841 1288 aa4.79□□□□□ -1.64
CLN5-214ENST00000636705 TSPAN6O43657 245 aa4.79□□□□□ -1.64
CLN5-214ENST00000636705 AOC2O75106 756 aa4.79□□□□□ -1.64
CLN5-214ENST00000636705 GMPSP49915 693 aaPredicted RBP4.79□□□□□ -1.64
CLN5-214ENST00000636705 EXOSC10Q01780 885 aaKnown RBP4.79□□□□□ -1.64
CLN5-214ENST00000636705 TCIRG1Q13488 830 aa4.79□□□□□ -1.64
CLN5-214ENST00000636705 ALG1LQ6GMV1 187 aa4.79□□□□□ -1.64
CLN5-214ENST00000636705 OTUD7BQ6GQQ9 843 aa4.79□□□□□ -1.64
CLN5-214ENST00000636705 FBXO46Q6PJ61 603 aaPredicted RBP4.79□□□□□ -1.64
CLN5-214ENST00000636705 PI16Q6UXB8 463 aa4.79□□□□□ -1.64
CLN5-214ENST00000636705 KRT26Q7Z3Y9 468 aa4.79□□□□□ -1.64
CLN5-214ENST00000636705 CCDC24Q8N4L8 307 aa4.79□□□□□ -1.64
CLN5-214ENST00000636705 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.79□□□□□ -1.64
CLN5-214ENST00000636705 ADAM32Q8TC27 787 aa4.79□□□□□ -1.64
CLN5-214ENST00000636705 RASGRP4Q8TDF6 673 aa4.79□□□□□ -1.64
CLN5-214ENST00000636705 COL26A1Q96A83 441 aa4.79□□□□□ -1.64
CLN5-214ENST00000636705 SENP7Q9BQF6 1050 aa4.79□□□□□ -1.64
CLN5-214ENST00000636705 TRIM55Q9BYV6 548 aa4.79□□□□□ -1.64
CLN5-214ENST00000636705 ARNT2Q9HBZ2 717 aa4.79□□□□□ -1.64
CLN5-214ENST00000636705 RNF186Q9NXI6 227 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms